{"id":8418663,"name":"ANCOMBC","ecosystem":"bioconductor","description":"Microbiome differential abudance and correlation analyses with bias correction","homepage":"https://github.com/FrederickHuangLin/ANCOMBC","licenses":"Artistic-2.0","normalized_licenses":["Artistic-2.0"],"repository_url":"https://github.com/FrederickHuangLin/ANCOMBC","keywords_array":["DifferentialExpression","Microbiome","Normalization","Sequencing","Software"],"namespace":null,"versions_count":9,"first_release_published_at":"2023-10-12T14:11:27.706Z","latest_release_published_at":"2026-05-07T01:33:14.163Z","latest_release_number":"2.14.0","latest_published_release_number":null,"last_synced_at":"2026-10-03T17:44:45.011Z","created_at":"2023-10-12T14:11:27.538Z","updated_at":"2026-10-03T17:44:46.078Z","registry_url":"https://bioconductor.org/packages/ANCOMBC","install_command":null,"documentation_url":"https://bioconductor.org/packages/release/bioc/vignettes/ANCOMBC/inst/doc/ANCOMBC.pdf","metadata":{},"repo_metadata":{"id":37485685,"uuid":"286365218","full_name":"FrederickHuangLin/ANCOMBC","owner":"FrederickHuangLin","description":"Differential abundance (DA) and correlation analyses for microbial absolute abundance data","archived":false,"fork":false,"pushed_at":"2026-09-18T17:01:48.000Z","size":894,"stargazers_count":144,"open_issues_count":80,"forks_count":34,"subscribers_count":6,"default_branch":"bugfix","last_synced_at":"2026-10-03T09:42:00.896Z","etag":null,"topics":["ancom","ancombc","ancombc2","correlation","differential-abundance-analysis","microbiome","normalization","secom","sequencing"],"latest_commit_sha":null,"homepage":"https://www.nature.com/articles/s41467-020-17041-7","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/FrederickHuangLin.png","metadata":{"files":{"readme":"README.md","changelog":"NEWS","contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null,"notice":null,"maintainers":null,"copyright":null,"agents":null,"claude":null,"gemini":null,"cursor":null,"copilot":null,"dco":null,"cla":null,"disclosure":null}},"created_at":"2020-08-10T03:18:30.000Z","updated_at":"2026-09-30T15:49:20.000Z","dependencies_parsed_at":"2026-08-29T12:42:04.401Z","dependency_job_id":null,"html_url":"https://github.com/FrederickHuangLin/ANCOMBC","commit_stats":{"total_commits":60,"total_committers":10,"mean_commits":6.0,"dds":"0.44999999999999996","last_synced_commit":"6d472e712f223eb1c5b87fbd7bc6ebbb6ccfb059"},"previous_names":[],"tags_count":0,"template":false,"template_full_name":null,"purl":"pkg:github/FrederickHuangLin/ANCOMBC","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/FrederickHuangLin%2FANCOMBC","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/FrederickHuangLin%2FANCOMBC/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/FrederickHuangLin%2FANCOMBC/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/FrederickHuangLin%2FANCOMBC/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/FrederickHuangLin","download_url":"https://codeload.github.com/FrederickHuangLin/ANCOMBC/tar.gz/refs/heads/bugfix","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/FrederickHuangLin%2FANCOMBC/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":343072799,"owners_count":37977971,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-08-22T15:14:58.755Z","status":"online","status_checked_at":"2026-10-03T02:00:07.567Z","response_time":59,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"FrederickHuangLin","name":"Frederick Huang Lin","uuid":"7278887","kind":"user","description":"Twinkle, twinkle, little star","email":"","website":null,"location":"Bethesda","twitter":null,"company":"Eunice Kennedy Shriver National Institute  of Child Health and Human Development (NICHD), NIH","icon_url":"https://avatars.githubusercontent.com/u/7278887?u=c5e12668e86062cc928906ca1ccf6620fece0049\u0026v=4","repositories_count":5,"last_synced_at":"2023-05-01T15:32:58.702Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/FrederickHuangLin","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2023-05-01T15:32:58.744Z","updated_at":"2023-05-01T15:32:58.744Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/FrederickHuangLin","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/FrederickHuangLin/repositories"},"tags":[]},"repo_metadata_updated_at":"2026-10-03T17:44:46.078Z","dependent_packages_count":3,"downloads":170997,"downloads_period":"total","dependent_repos_count":0,"rankings":{"downloads":29.508196721311474,"dependent_repos_count":0.0,"dependent_packages_count":0.0,"stargazers_count":null,"forks_count":null,"docker_downloads_count":null,"average":9.836065573770492},"purl":"pkg:bioconductor/ANCOMBC","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/bioconductor/ANCOMBC","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/bioconductor/ANCOMBC","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/bioconductor/ANCOMBC/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2026-10-03T01:24:00.901Z","issues_count":75,"pull_requests_count":7,"avg_time_to_close_issue":9973020.588235294,"avg_time_to_close_pull_request":5465203.5,"issues_closed_count":17,"pull_requests_closed_count":2,"pull_request_authors_count":6,"issue_authors_count":66,"avg_comments_per_issue":0.7066666666666667,"avg_comments_per_pull_request":0.0,"merged_pull_requests_count":1,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":10,"past_year_pull_requests_count":0,"past_year_avg_time_to_close_issue":436.0,"past_year_avg_time_to_close_pull_request":null,"past_year_issues_closed_count":1,"past_year_pull_requests_closed_count":0,"past_year_pull_request_authors_count":0,"past_year_issue_authors_count":10,"past_year_avg_comments_per_issue":0.5,"past_year_avg_comments_per_pull_request":null,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":0,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/FrederickHuangLin%2FANCOMBC/issues","maintainers":[{"login":"Maggie8888","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/Maggie8888"}],"active_maintainers":[]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/ANCOMBC/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/ANCOMBC/version_numbers","latest_version_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/ANCOMBC/latest_version","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/ANCOMBC/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/ANCOMBC/related_packages","codemeta_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/ANCOMBC/codemeta","maintainers":[{"uuid":"huanglinfrederick@gmail.com","login":null,"name":"Huang Lin","email":"huanglinfrederick@gmail.com","url":null,"packages_count":1,"html_url":null,"role":null,"created_at":"2023-11-25T13:45:45.400Z","updated_at":"2023-11-25T13:45:45.400Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/maintainers/huanglinfrederick@gmail.com/packages"}]}