{"id":8419159,"name":"cytomapper","ecosystem":"bioconductor","description":"Visualization of highly multiplexed imaging data in R","homepage":"https://github.com/BodenmillerGroup/cytomapper","licenses":"GPL (\u003e= 2)","normalized_licenses":["CNRI-Python-GPL-Compatible"],"repository_url":"https://github.com/BodenmillerGroup/cytomapper","keywords_array":["DataImport","ImmunoOncology","MultipleComparison","Normalization","OneChannel","SingleCell","Software","TwoChannel"],"namespace":null,"versions_count":7,"first_release_published_at":"2023-10-12T14:28:16.736Z","latest_release_published_at":"2026-04-30T04:19:15.831Z","latest_release_number":"1.24.0","last_synced_at":"2026-09-25T06:48:00.936Z","created_at":"2023-10-12T14:28:16.479Z","updated_at":"2026-09-25T06:48:00.980Z","registry_url":"https://bioconductor.org/packages/cytomapper","install_command":null,"documentation_url":"https://bioconductor.org/packages/release/bioc/vignettes/cytomapper/inst/doc/cytomapper.pdf","metadata":{},"repo_metadata":{"id":44922056,"uuid":"234525343","full_name":"BodenmillerGroup/cytomapper","owner":"BodenmillerGroup","description":"R package for visualization of highly multiplexed imaging data","archived":false,"fork":false,"pushed_at":"2026-08-25T10:34:33.000Z","size":245753,"stargazers_count":37,"open_issues_count":8,"forks_count":11,"subscribers_count":6,"default_branch":"devel","last_synced_at":"2026-09-25T04:48:14.661Z","etag":null,"topics":["bioimaging","imaging-mass-cytometry","single-cell","spatial-analysis"],"latest_commit_sha":null,"homepage":"https://bodenmillergroup.github.io/cytomapper/","language":"R","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":null,"status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/BodenmillerGroup.png","metadata":{"files":{"readme":"README.md","changelog":"NEWS","contributing":null,"funding":null,"license":null,"code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null,"notice":null,"maintainers":null,"copyright":null,"agents":null,"claude":null,"gemini":null,"cursor":null,"copilot":null,"dco":null,"cla":null,"disclosure":null}},"created_at":"2020-01-17T10:23:22.000Z","updated_at":"2026-09-15T16:54:50.000Z","dependencies_parsed_at":"2026-08-25T14:36:53.781Z","dependency_job_id":null,"html_url":"https://github.com/BodenmillerGroup/cytomapper","commit_stats":{"total_commits":725,"total_committers":10,"mean_commits":72.5,"dds":"0.13655172413793104","last_synced_commit":"7ba413fe91d72ce6f3b39abd5d421235307ef43b"},"previous_names":[],"tags_count":2,"template":false,"template_full_name":null,"purl":"pkg:github/BodenmillerGroup/cytomapper","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BodenmillerGroup%2Fcytomapper","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BodenmillerGroup%2Fcytomapper/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BodenmillerGroup%2Fcytomapper/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BodenmillerGroup%2Fcytomapper/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/BodenmillerGroup","download_url":"https://codeload.github.com/BodenmillerGroup/cytomapper/tar.gz/refs/heads/devel","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BodenmillerGroup%2Fcytomapper/sbom","scorecard":null,"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":341189360,"owners_count":37668226,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-08-22T15:14:58.755Z","status":"online","status_checked_at":"2026-09-25T02:00:20.896Z","response_time":55,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"BodenmillerGroup","name":"BodenmillerGroup","uuid":"10165187","kind":"organization","description":"","email":null,"website":null,"location":null,"twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/10165187?v=4","repositories_count":83,"last_synced_at":"2024-04-16T01:05:54.560Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/BodenmillerGroup","funding_links":[],"total_stars":378,"followers":86,"following":0,"created_at":"2022-11-10T23:00:29.357Z","updated_at":"2024-04-16T01:06:06.582Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/BodenmillerGroup","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/BodenmillerGroup/repositories"},"tags":[{"name":"v1.2.0","sha":"59177403fe1d34073524dfe7192721fbc8b3cbcb","kind":"commit","published_at":"2020-10-27T15:55:06.000Z","download_url":"https://codeload.github.com/BodenmillerGroup/cytomapper/tar.gz/v1.2.0","html_url":"https://github.com/BodenmillerGroup/cytomapper/releases/tag/v1.2.0","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/BodenmillerGroup/cytomapper@v1.2.0","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BodenmillerGroup%2Fcytomapper/tags/v1.2.0","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BodenmillerGroup%2Fcytomapper/tags/v1.2.0/manifests"},{"name":"v1.1.2","sha":"073347a512500c1fd91f00bf41619117541cd85f","kind":"commit","published_at":"2020-08-21T10:12:24.000Z","download_url":"https://codeload.github.com/BodenmillerGroup/cytomapper/tar.gz/v1.1.2","html_url":"https://github.com/BodenmillerGroup/cytomapper/releases/tag/v1.1.2","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/BodenmillerGroup/cytomapper@v1.1.2","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BodenmillerGroup%2Fcytomapper/tags/v1.1.2","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/BodenmillerGroup%2Fcytomapper/tags/v1.1.2/manifests"}]},"repo_metadata_updated_at":"2026-09-25T06:48:00.980Z","dependent_packages_count":3,"downloads":50645,"downloads_period":"total","dependent_repos_count":0,"rankings":{"downloads":56.611570247933884,"dependent_repos_count":0.0,"dependent_packages_count":0.0,"stargazers_count":null,"forks_count":null,"docker_downloads_count":null,"average":18.87052341597796},"purl":"pkg:bioconductor/cytomapper","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/bioconductor/cytomapper","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/bioconductor/cytomapper","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/bioconductor/cytomapper/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2026-09-25T02:51:48.648Z","issues_count":75,"pull_requests_count":26,"avg_time_to_close_issue":17899729.23529412,"avg_time_to_close_pull_request":38905.260869565216,"issues_closed_count":68,"pull_requests_closed_count":23,"pull_request_authors_count":4,"issue_authors_count":22,"avg_comments_per_issue":1.56,"avg_comments_per_pull_request":0.6923076923076923,"merged_pull_requests_count":22,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":4,"past_year_pull_requests_count":1,"past_year_avg_time_to_close_issue":5559483.333333333,"past_year_avg_time_to_close_pull_request":71870.0,"past_year_issues_closed_count":3,"past_year_pull_requests_closed_count":1,"past_year_pull_request_authors_count":1,"past_year_issue_authors_count":2,"past_year_avg_comments_per_issue":1.5,"past_year_avg_comments_per_pull_request":1.0,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":1,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/bodenmillergroup%2Fcytomapper/issues","maintainers":[{"login":"nilseling","count":59,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/nilseling"},{"login":"toobiwankenobi","count":7,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/toobiwankenobi"},{"login":"lassedochreden","count":3,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/lassedochreden"},{"login":"ndamond","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/ndamond"}],"active_maintainers":[{"login":"lassedochreden","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/lassedochreden"}]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/cytomapper/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/cytomapper/version_numbers","latest_version_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/cytomapper/latest_version","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/cytomapper/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/cytomapper/related_packages","codemeta_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/packages/cytomapper/codemeta","maintainers":[{"uuid":"lasse.meyer@dqbm.uzh.ch","login":null,"name":"Lasse Meyer","email":"lasse.meyer@dqbm.uzh.ch","url":null,"packages_count":2,"html_url":null,"role":null,"created_at":"2024-05-16T08:20:39.250Z","updated_at":"2024-05-16T08:20:39.250Z","packages_url":"https://packages.ecosyste.ms/api/v1/registries/bioconductor.org/maintainers/lasse.meyer@dqbm.uzh.ch/packages"}]}