{"id":13699897,"name":"mmseqs2","ecosystem":"debian","description":null,"homepage":"https://github.com/soedinglab/MMseqs2","licenses":"mit","normalized_licenses":[],"repository_url":"https://github.com/soedinglab/MMseqs2","keywords_array":["misc"],"namespace":"main","versions_count":1,"first_release_published_at":"2026-02-12T20:52:34.562Z","latest_release_published_at":"2026-02-12T20:52:34.562Z","latest_release_number":"14-7e284+ds-1","last_synced_at":"2026-03-13T19:49:37.578Z","created_at":"2026-02-12T20:52:34.340Z","updated_at":"2026-08-24T15:19:54.773Z","registry_url":"https://tracker.debian.org/pkg/mmseqs2","install_command":"apt-get install mmseqs2","documentation_url":"https://packages.debian.org/bookworm/mmseqs2","metadata":{"component":"main","architecture":"amd64 arm64 mips64el ppc64el ia64 kfreebsd-amd64 riscv64 all","priority":"extra","binary":"mmseqs2, mmseqs2-examples","standards_version":"4.6.1","maintainer":"Debian Med Packaging Team \u003cdebian-med-packaging@lists.alioth.debian.org\u003e","build_depends":"debhelper-compat (= 13)","build_depends_indep":null,"build_depends_arch":"cmake, libgzstream-dev, libzstd-dev, zlib1g-dev, libbz2-dev, libsimde-dev, libxxhash-dev"},"repo_metadata":{"id":37735986,"uuid":"63755587","full_name":"soedinglab/MMseqs2","owner":"soedinglab","description":"MMseqs2: ultra fast and sensitive search and clustering suite","archived":false,"fork":false,"pushed_at":"2026-08-24T12:05:35.000Z","size":32791,"stargazers_count":2130,"open_issues_count":285,"forks_count":298,"subscribers_count":27,"default_branch":"master","last_synced_at":"2026-08-24T12:17:06.590Z","etag":null,"topics":["alignment","bioinformatics","blast","linclust","metagenomics","mmseqs","profile-search","sequence-clustering","sequence-search","taxonomy"],"latest_commit_sha":null,"homepage":"https://mmseqs.com","language":"C","has_issues":true,"has_wiki":null,"has_pages":null,"mirror_url":null,"source_name":null,"license":"mit","status":null,"scm":"git","pull_requests_enabled":true,"icon_url":"https://github.com/soedinglab.png","metadata":{"files":{"readme":"README.md","changelog":null,"contributing":null,"funding":null,"license":"LICENSE.md","code_of_conduct":null,"threat_model":null,"audit":null,"citation":null,"codeowners":null,"security":null,"support":null,"governance":null,"roadmap":null,"authors":null,"dei":null,"publiccode":null,"codemeta":null,"zenodo":null,"notice":null,"maintainers":null,"copyright":null,"agents":null,"claude":null,"gemini":null,"cursor":null,"copilot":null,"dco":null,"cla":null,"disclosure":null}},"created_at":"2016-07-20T06:17:59.000Z","updated_at":"2026-08-24T01:42:19.000Z","dependencies_parsed_at":"2026-08-24T12:18:09.848Z","dependency_job_id":null,"html_url":"https://github.com/soedinglab/MMseqs2","commit_stats":{"total_commits":5504,"total_committers":94,"mean_commits":58.5531914893617,"dds":0.5832122093023255,"last_synced_commit":"2fad714b525f1975b62c2d2b5aff28274ad57466"},"previous_names":[],"tags_count":19,"template":false,"template_full_name":null,"purl":"pkg:github/soedinglab/MMseqs2","repository_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2","tags_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags","releases_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/releases","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/manifests","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/soedinglab","download_url":"https://codeload.github.com/soedinglab/MMseqs2/tar.gz/refs/heads/master","sbom_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/sbom","scorecard":{"id":396658,"data":{"date":"2025-08-11","repo":{"name":"github.com/soedinglab/MMseqs2","commit":"c8fbdf970d5e633e1e5d8390ec668a9ea8d7e69f"},"scorecard":{"version":"v5.2.1-40-gf6ed084d","commit":"f6ed084d17c9236477efd66e5b258b9d4cc7b389"},"score":5.1,"checks":[{"name":"Code-Review","score":1,"reason":"Found 5/28 approved changesets -- score normalized to 1","details":null,"documentation":{"short":"Determines if the project requires human code review before pull requests (aka merge requests) are merged.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#code-review"}},{"name":"Maintained","score":10,"reason":"30 commit(s) and 16 issue activity found in the last 90 days -- score normalized to 10","details":null,"documentation":{"short":"Determines if the project is \"actively maintained\".","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#maintained"}},{"name":"Dangerous-Workflow","score":10,"reason":"no dangerous workflow patterns detected","details":null,"documentation":{"short":"Determines if the project's GitHub Action workflows avoid dangerous patterns.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#dangerous-workflow"}},{"name":"Token-Permissions","score":0,"reason":"detected GitHub workflow tokens with excessive permissions","details":["Info: jobLevel 'contents' permission set to 'read': .github/workflows/docker.yml:29","Info: jobLevel 'contents' permission set to 'read': .github/workflows/docker.yml:85","Warn: no topLevel permission defined: .github/workflows/docker.yml:1","Warn: no topLevel permission defined: .github/workflows/mac-arm64.yml:1","Warn: no topLevel permission defined: .github/workflows/test-gpu.yml:1","Info: no jobLevel write permissions found"],"documentation":{"short":"Determines if the project's workflows follow the principle of least privilege.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#token-permissions"}},{"name":"CII-Best-Practices","score":0,"reason":"no effort to earn an OpenSSF best practices badge detected","details":null,"documentation":{"short":"Determines if the project has an OpenSSF (formerly CII) Best Practices Badge.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#cii-best-practices"}},{"name":"Security-Policy","score":0,"reason":"security policy file not detected","details":["Warn: no security policy file detected","Warn: no security file to analyze","Warn: no security file to analyze","Warn: no security file to analyze"],"documentation":{"short":"Determines if the project has published a security policy.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#security-policy"}},{"name":"License","score":10,"reason":"license file detected","details":["Info: project has a license file: LICENSE.md:0","Info: FSF or OSI recognized license: MIT License: LICENSE.md:0"],"documentation":{"short":"Determines if the project has defined a license.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#license"}},{"name":"Vulnerabilities","score":10,"reason":"0 existing vulnerabilities detected","details":null,"documentation":{"short":"Determines if the project has open, known unfixed vulnerabilities.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#vulnerabilities"}},{"name":"Binary-Artifacts","score":10,"reason":"no binaries found in the repo","details":null,"documentation":{"short":"Determines if the project has generated executable (binary) artifacts in the source repository.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#binary-artifacts"}},{"name":"Fuzzing","score":10,"reason":"project is fuzzed","details":["Info: CLibFuzzer integration found: lib/zstd/contrib/linux-kernel/test/DecompressCrash.c:82","Info: CLibFuzzer integration found: lib/zstd/contrib/linux-kernel/test/RoundTripCrash.c:159","Info: CLibFuzzer integration found: lib/zstd/tests/fuzz/block_decompress.c:27","Info: CLibFuzzer integration found: lib/zstd/tests/fuzz/block_round_trip.c:53","Info: CLibFuzzer integration found: lib/zstd/tests/fuzz/regression_driver.c:62","Info: CLibFuzzer integration found: lib/zstd/tests/fuzz/simple_decompress.c:25","Info: CLibFuzzer integration found: lib/zstd/tests/fuzz/simple_round_trip.c:58","Info: CLibFuzzer integration found: lib/zstd/tests/fuzz/stream_decompress.c:52","Info: CLibFuzzer integration found: lib/zstd/tests/fuzz/stream_round_trip.c:123"],"documentation":{"short":"Determines if the project uses fuzzing.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#fuzzing"}},{"name":"Signed-Releases","score":0,"reason":"Project has not signed or included provenance with any releases.","details":["Warn: release artifact 18-8cc5c not signed: https://api.github.com/repos/soedinglab/MMseqs2/releases/235432124","Warn: release artifact 17-b804f not signed: https://api.github.com/repos/soedinglab/MMseqs2/releases/195450001","Warn: release artifact 16-747c6 not signed: https://api.github.com/repos/soedinglab/MMseqs2/releases/187144898","Warn: release artifact 15-6f452 not signed: https://api.github.com/repos/soedinglab/MMseqs2/releases/127286041","Warn: release artifact 14-7e284 not signed: https://api.github.com/repos/soedinglab/MMseqs2/releases/79547333","Warn: release artifact 18-8cc5c does not have provenance: https://api.github.com/repos/soedinglab/MMseqs2/releases/235432124","Warn: release artifact 17-b804f does not have provenance: https://api.github.com/repos/soedinglab/MMseqs2/releases/195450001","Warn: release artifact 16-747c6 does not have provenance: https://api.github.com/repos/soedinglab/MMseqs2/releases/187144898","Warn: release artifact 15-6f452 does not have provenance: https://api.github.com/repos/soedinglab/MMseqs2/releases/127286041","Warn: release artifact 14-7e284 does not have provenance: https://api.github.com/repos/soedinglab/MMseqs2/releases/79547333"],"documentation":{"short":"Determines if the project cryptographically signs release artifacts.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#signed-releases"}},{"name":"Branch-Protection","score":0,"reason":"branch protection not enabled on development/release branches","details":["Warn: branch protection not enabled for branch 'master'"],"documentation":{"short":"Determines if the default and release branches are protected with GitHub's branch protection settings.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#branch-protection"}},{"name":"Packaging","score":10,"reason":"packaging workflow detected","details":["Info: Project packages its releases by way of GitHub Actions.: .github/workflows/docker.yml:82"],"documentation":{"short":"Determines if the project is published as a package that others can easily download, install, easily update, and uninstall.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#packaging"}},{"name":"SAST","score":0,"reason":"SAST tool is not run on all commits -- score normalized to 0","details":["Warn: 0 commits out of 7 are checked with a SAST tool"],"documentation":{"short":"Determines if the project uses static code analysis.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#sast"}},{"name":"Pinned-Dependencies","score":3,"reason":"dependency not pinned by hash detected -- score normalized to 3","details":["Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/docker.yml:33: update your workflow using https://app.stepsecurity.io/secureworkflow/soedinglab/MMseqs2/docker.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/docker.yml:36: update your workflow using https://app.stepsecurity.io/secureworkflow/soedinglab/MMseqs2/docker.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/docker.yml:39: update your workflow using https://app.stepsecurity.io/secureworkflow/soedinglab/MMseqs2/docker.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/docker.yml:89: update your workflow using https://app.stepsecurity.io/secureworkflow/soedinglab/MMseqs2/docker.yml/master?enable=pin","Warn: third-party GitHubAction not pinned by hash: .github/workflows/docker.yml:95: update your workflow using https://app.stepsecurity.io/secureworkflow/soedinglab/MMseqs2/docker.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/mac-arm64.yml:12: update your workflow using https://app.stepsecurity.io/secureworkflow/soedinglab/MMseqs2/mac-arm64.yml/master?enable=pin","Warn: GitHub-owned GitHubAction not pinned by hash: .github/workflows/test-gpu.yml:10: update your workflow using https://app.stepsecurity.io/secureworkflow/soedinglab/MMseqs2/test-gpu.yml/master?enable=pin","Warn: containerImage not pinned by hash: .github/workflows/Dockerfile.GPU-buster-cross-sbsa:1: pin your Docker image by updating ghcr.io/steineggerlab/build-containers:main-sbsa to ghcr.io/steineggerlab/build-containers:main-sbsa@sha256:596b86b81c8cbf38793678a4bb78c1c4c8c39afed19e923a8e1373c919387ff6","Warn: containerImage not pinned by hash: .github/workflows/Dockerfile.GPU-manylinux2014:1: pin your Docker image by updating ghcr.io/steineggerlab/build-containers:main-x86_64 to ghcr.io/steineggerlab/build-containers:main-x86_64@sha256:89eaf8b7bbf215d2829fe3d65bbb8f561f55674df5a32933261d9a9fe4ea6fb6","Warn: containerImage not pinned by hash: Dockerfile:2","Warn: containerImage not pinned by hash: Dockerfile:61: pin your Docker image by updating debian:bookworm-slim to debian:bookworm-slim@sha256:b1a741487078b369e78119849663d7f1a5341ef2768798f7b7406c4240f86aef","Warn: containerImage not pinned by hash: lib/zstd/contrib/docker/Dockerfile:3","Warn: containerImage not pinned by hash: lib/zstd/contrib/docker/Dockerfile:10: pin your Docker image by updating alpine to alpine@sha256:4bcff63911fcb4448bd4fdacec207030997caf25e9bea4045fa6c8c44de311d1","Info:   0 out of   4 GitHub-owned GitHubAction dependencies pinned","Info:   6 out of   9 third-party GitHubAction dependencies pinned","Info:   0 out of   6 containerImage dependencies pinned"],"documentation":{"short":"Determines if the project has declared and pinned the dependencies of its build process.","url":"https://github.com/ossf/scorecard/blob/f6ed084d17c9236477efd66e5b258b9d4cc7b389/docs/checks.md#pinned-dependencies"}}]},"last_synced_at":"2025-08-18T19:10:26.686Z","repository_id":37735986,"created_at":"2025-08-18T19:10:26.686Z","updated_at":"2025-08-18T19:10:26.686Z"},"host":{"name":"GitHub","url":"https://github.com","kind":"github","repositories_count":286080680,"owners_count":36882936,"icon_url":"https://github.com/github.png","version":null,"created_at":"2022-05-30T11:31:42.601Z","updated_at":"2026-08-22T15:14:58.755Z","status":"online","status_checked_at":"2026-08-24T02:00:14.037Z","response_time":54,"last_error":null,"robots_txt_status":"success","robots_txt_updated_at":"2025-07-24T06:49:26.215Z","robots_txt_url":"https://github.com/robots.txt","online":true,"can_crawl_api":true,"host_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories","repository_names_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repository_names","owners_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners"},"owner_record":{"login":"soedinglab","name":"Söding Lab","uuid":"7237671","kind":"organization","description":"Quantitative and Computational Biology","email":null,"website":"https://www.mpibpc.mpg.de/soeding","location":"Goettingen, Germany","twitter":null,"company":null,"icon_url":"https://avatars.githubusercontent.com/u/7237671?v=4","repositories_count":22,"last_synced_at":"2023-03-01T17:05:20.285Z","metadata":{"has_sponsors_listing":false},"html_url":"https://github.com/soedinglab","funding_links":[],"total_stars":null,"followers":null,"following":null,"created_at":"2022-11-12T13:38:27.701Z","updated_at":"2023-03-01T17:05:20.316Z","owner_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/soedinglab","repositories_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/owners/soedinglab/repositories"},"tags":[{"name":"18-8cc5c","sha":"8cc5ce367b5638c4306c2d7cfc652dd099a4643f","kind":"commit","published_at":"2025-07-27T08:11:34.000Z","download_url":"https://codeload.github.com/soedinglab/MMseqs2/tar.gz/18-8cc5c","html_url":"https://github.com/soedinglab/MMseqs2/releases/tag/18-8cc5c","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/soedinglab/MMseqs2@18-8cc5c","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/18-8cc5c","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/18-8cc5c/manifests"},{"name":"17-b804f","sha":"b804fbe384e6f6c9fe96322ec0e92d48bccd0a42","kind":"commit","published_at":"2025-01-18T10:33:59.000Z","download_url":"https://codeload.github.com/soedinglab/MMseqs2/tar.gz/17-b804f","html_url":"https://github.com/soedinglab/MMseqs2/releases/tag/17-b804f","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/soedinglab/MMseqs2@17-b804f","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/17-b804f","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/17-b804f/manifests"},{"name":"16-747c6","sha":"747c64cc8db3b4803a0f1194a3f75b3ba9f81bcb","kind":"commit","published_at":"2024-11-26T05:22:36.000Z","download_url":"https://codeload.github.com/soedinglab/MMseqs2/tar.gz/16-747c6","html_url":"https://github.com/soedinglab/MMseqs2/releases/tag/16-747c6","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/soedinglab/MMseqs2@16-747c6","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/16-747c6","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/16-747c6/manifests"},{"name":"15-6f452","sha":"6f45232ac8daca14e354ae320a4359056ec524c2","kind":"commit","published_at":"2023-10-31T08:15:26.000Z","download_url":"https://codeload.github.com/soedinglab/MMseqs2/tar.gz/15-6f452","html_url":"https://github.com/soedinglab/MMseqs2/releases/tag/15-6f452","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/soedinglab/MMseqs2@15-6f452","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/15-6f452","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/15-6f452/manifests"},{"name":"14-7e284","sha":"7e2840992948ee89dcc336522dc98a74fe0adf00","kind":"commit","published_at":"2022-10-13T08:59:33.000Z","download_url":"https://codeload.github.com/soedinglab/MMseqs2/tar.gz/14-7e284","html_url":"https://github.com/soedinglab/MMseqs2/releases/tag/14-7e284","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/soedinglab/MMseqs2@14-7e284","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/14-7e284","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/14-7e284/manifests"},{"name":"13-45111","sha":"45111b641859ed0ddd875b94d6fd1aef1a675b7e","kind":"commit","published_at":"2021-02-21T14:03:53.000Z","download_url":"https://codeload.github.com/soedinglab/MMseqs2/tar.gz/13-45111","html_url":"https://github.com/soedinglab/MMseqs2/releases/tag/13-45111","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/soedinglab/MMseqs2@13-45111","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/13-45111","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/13-45111/manifests"},{"name":"12-113e3","sha":"113e3212c137d026e297c7540e1fcd039f6812b1","kind":"commit","published_at":"2020-09-01T11:13:02.000Z","download_url":"https://codeload.github.com/soedinglab/MMseqs2/tar.gz/12-113e3","html_url":"https://github.com/soedinglab/MMseqs2/releases/tag/12-113e3","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/soedinglab/MMseqs2@12-113e3","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/12-113e3","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/12-113e3/manifests"},{"name":"11-e1a1c","sha":"e1a1c1226ef22ac3d0da8e8f71adb8fd2388a249","kind":"commit","published_at":"2020-02-11T16:17:38.000Z","download_url":"https://codeload.github.com/soedinglab/MMseqs2/tar.gz/11-e1a1c","html_url":"https://github.com/soedinglab/MMseqs2/releases/tag/11-e1a1c","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/soedinglab/MMseqs2@11-e1a1c","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/11-e1a1c","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/11-e1a1c/manifests"},{"name":"10-6d92c","sha":"6d92cd21676ccc36531f2852f7eb747f6389435f","kind":"commit","published_at":"2019-08-22T23:53:13.000Z","download_url":"https://codeload.github.com/soedinglab/MMseqs2/tar.gz/10-6d92c","html_url":"https://github.com/soedinglab/MMseqs2/releases/tag/10-6d92c","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/soedinglab/MMseqs2@10-6d92c","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/10-6d92c","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/10-6d92c/manifests"},{"name":"9-d36de","sha":"d36dea228b039f652a7d3e1c79e3e8d40df83125","kind":"commit","published_at":"2019-05-04T02:52:16.000Z","download_url":"https://codeload.github.com/soedinglab/MMseqs2/tar.gz/9-d36de","html_url":"https://github.com/soedinglab/MMseqs2/releases/tag/9-d36de","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/soedinglab/MMseqs2@9-d36de","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/9-d36de","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/9-d36de/manifests"},{"name":"8-fac81","sha":"fac81fa7a63c1205209d4acbc46ce2209abcaa8a","kind":"commit","published_at":"2019-04-01T00:54:39.000Z","download_url":"https://codeload.github.com/soedinglab/MMseqs2/tar.gz/8-fac81","html_url":"https://github.com/soedinglab/MMseqs2/releases/tag/8-fac81","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/soedinglab/MMseqs2@8-fac81","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/8-fac81","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/8-fac81/manifests"},{"name":"7-4e23d","sha":"4e23d5f1d13a435c7b6c9406137ed68ce297e0fc","kind":"commit","published_at":"2018-11-29T22:07:27.000Z","download_url":"https://codeload.github.com/soedinglab/MMseqs2/tar.gz/7-4e23d","html_url":"https://github.com/soedinglab/MMseqs2/releases/tag/7-4e23d","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/soedinglab/MMseqs2@7-4e23d","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/7-4e23d","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/7-4e23d/manifests"},{"name":"6-f5a1c","sha":"f5a1cdb44c996d6be229226b09ecc687646c0c12","kind":"commit","published_at":"2018-10-09T01:15:55.000Z","download_url":"https://codeload.github.com/soedinglab/MMseqs2/tar.gz/6-f5a1c","html_url":"https://github.com/soedinglab/MMseqs2/releases/tag/6-f5a1c","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/soedinglab/MMseqs2@6-f5a1c","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/6-f5a1c","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/6-f5a1c/manifests"},{"name":"5-9375b","sha":"9375bafabbb1e714404887bcfe6b8ce879092cd5","kind":"commit","published_at":"2018-09-04T23:01:17.000Z","download_url":"https://codeload.github.com/soedinglab/MMseqs2/tar.gz/5-9375b","html_url":"https://github.com/soedinglab/MMseqs2/releases/tag/5-9375b","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/soedinglab/MMseqs2@5-9375b","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/5-9375b","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/5-9375b/manifests"},{"name":"4-0b8cc","sha":"0b8ccee64a035108f10ea300097c1ed458407d0e","kind":"commit","published_at":"2018-09-04T15:10:02.000Z","download_url":"https://codeload.github.com/soedinglab/MMseqs2/tar.gz/4-0b8cc","html_url":"https://github.com/soedinglab/MMseqs2/releases/tag/4-0b8cc","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/soedinglab/MMseqs2@4-0b8cc","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/4-0b8cc","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/4-0b8cc/manifests"},{"name":"3-be8f6","sha":"be8f616d7cfd406880608e470a6c7fda45b04c50","kind":"commit","published_at":"2018-05-28T05:31:14.000Z","download_url":"https://codeload.github.com/soedinglab/MMseqs2/tar.gz/3-be8f6","html_url":"https://github.com/soedinglab/MMseqs2/releases/tag/3-be8f6","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/soedinglab/MMseqs2@3-be8f6","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/3-be8f6","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/3-be8f6/manifests"},{"name":"2-23394","sha":"2339462c06eab0bee64e4fc0ebebf7707f6e53fd","kind":"commit","published_at":"2018-03-04T03:03:53.000Z","download_url":"https://codeload.github.com/soedinglab/MMseqs2/tar.gz/2-23394","html_url":"https://github.com/soedinglab/MMseqs2/releases/tag/2-23394","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/soedinglab/MMseqs2@2-23394","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/2-23394","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/2-23394/manifests"},{"name":"1-c7a89","sha":"c7a89b6aa6d94796783e94d49750b3e0882573aa","kind":"commit","published_at":"2017-10-28T09:44:39.000Z","download_url":"https://codeload.github.com/soedinglab/MMseqs2/tar.gz/1-c7a89","html_url":"https://github.com/soedinglab/MMseqs2/releases/tag/1-c7a89","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/soedinglab/MMseqs2@1-c7a89","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/1-c7a89","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/1-c7a89/manifests"},{"name":"vNatBiotech","sha":"50ecd385ae8c66baa33ca4709a5ef21d2fe0113b","kind":"commit","published_at":"2017-08-08T15:24:11.000Z","download_url":"https://codeload.github.com/soedinglab/MMseqs2/tar.gz/vNatBiotech","html_url":"https://github.com/soedinglab/MMseqs2/releases/tag/vNatBiotech","dependencies_parsed_at":null,"dependency_job_id":null,"purl":"pkg:github/soedinglab/MMseqs2@vNatBiotech","tag_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/vNatBiotech","manifests_url":"https://repos.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/tags/vNatBiotech/manifests"}]},"repo_metadata_updated_at":"2026-08-24T15:19:54.772Z","dependent_packages_count":0,"downloads":null,"downloads_period":null,"dependent_repos_count":0,"rankings":{"downloads":null,"dependent_repos_count":0.0,"dependent_packages_count":0.0,"stargazers_count":null,"forks_count":null,"docker_downloads_count":null,"average":100},"purl":"pkg:deb/debian/mmseqs2?arch=source\u0026distro=debian-12","advisories":[],"docker_usage_url":"https://docker.ecosyste.ms/usage/debian/mmseqs2","docker_dependents_count":null,"docker_downloads_count":null,"usage_url":"https://repos.ecosyste.ms/usage/debian/mmseqs2","dependent_repositories_url":"https://repos.ecosyste.ms/api/v1/usage/debian/mmseqs2/dependencies","status":null,"funding_links":[],"critical":null,"issue_metadata":{"last_synced_at":"2026-08-15T04:17:54.474Z","issues_count":409,"pull_requests_count":91,"avg_time_to_close_issue":14170199.134920634,"avg_time_to_close_pull_request":6085136.483333333,"issues_closed_count":126,"pull_requests_closed_count":60,"pull_request_authors_count":38,"issue_authors_count":339,"avg_comments_per_issue":1.982885085574572,"avg_comments_per_pull_request":1.065934065934066,"merged_pull_requests_count":39,"bot_issues_count":0,"bot_pull_requests_count":0,"past_year_issues_count":24,"past_year_pull_requests_count":18,"past_year_avg_time_to_close_issue":2472686.4285714286,"past_year_avg_time_to_close_pull_request":632980.3333333334,"past_year_issues_closed_count":7,"past_year_pull_requests_closed_count":9,"past_year_pull_request_authors_count":7,"past_year_issue_authors_count":23,"past_year_avg_comments_per_issue":1.375,"past_year_avg_comments_per_pull_request":0.2222222222222222,"past_year_bot_issues_count":0,"past_year_bot_pull_requests_count":0,"past_year_merged_pull_requests_count":5,"issues_url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/repositories/soedinglab%2FMMseqs2/issues","maintainers":[{"login":"Gyuuul2","count":5,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/Gyuuul2"},{"login":"sooyoung-cha","count":2,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/sooyoung-cha"},{"login":"martin-steinegger","count":2,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/martin-steinegger"},{"login":"milot-mirdita","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/milot-mirdita"},{"login":"RuoshiZhang","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/RuoshiZhang"},{"login":"AmirAsgary","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/AmirAsgary"}],"active_maintainers":[{"login":"Gyuuul2","count":5,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/Gyuuul2"},{"login":"AmirAsgary","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/AmirAsgary"},{"login":"sooyoung-cha","count":1,"url":"https://issues.ecosyste.ms/api/v1/hosts/GitHub/authors/sooyoung-cha"}]},"versions_url":"https://packages.ecosyste.ms/api/v1/registries/debian-12/packages/mmseqs2/versions","version_numbers_url":"https://packages.ecosyste.ms/api/v1/registries/debian-12/packages/mmseqs2/version_numbers","latest_version_url":"https://packages.ecosyste.ms/api/v1/registries/debian-12/packages/mmseqs2/latest_version","dependent_packages_url":"https://packages.ecosyste.ms/api/v1/registries/debian-12/packages/mmseqs2/dependent_packages","related_packages_url":"https://packages.ecosyste.ms/api/v1/registries/debian-12/packages/mmseqs2/related_packages","codemeta_url":"https://packages.ecosyste.ms/api/v1/registries/debian-12/packages/mmseqs2/codemeta","maintainers":[]}