bioconductor.org "ChipOnChip" keyword
View the packages on the bioconductor.org package registry that are tagged with the "ChipOnChip" keyword.
recoup 1.36.0
An R package for the creation of complex genomic profile plots5 versions - Latest release: 3 months ago - 15.6 thousand downloads total - 1 stars on GitHub - 1 maintainer
Top 5.3% on bioconductor.org
5 versions - Latest release: 3 months ago - 1 dependent package - 52.7 thousand downloads total - 1 maintainer
puma 3.50.0
Propagating Uncertainty in Microarray Analysis(including Affymetrix tranditional 3' arrays and ex...5 versions - Latest release: 3 months ago - 1 dependent package - 52.7 thousand downloads total - 1 maintainer
epiregulon.extra 1.4.0
Companion package to epiregulon with additional plotting, differential and graph functions6 versions - Latest release: 3 months ago - 3.72 thousand downloads total - 0 stars on GitHub - 1 maintainer
epidecodeR 1.16.0
epidecodeR: a functional exploration tool for epigenetic and epitranscriptomic regulation5 versions - Latest release: 3 months ago - 6.74 thousand downloads total - 3 stars on GitHub - 1 maintainer
rmspc 1.14.0
Multiple Sample Peak Calling5 versions - Latest release: 3 months ago - 5.92 thousand downloads total - 20 stars on GitHub - 1 maintainer
geneXtendeR 1.34.0
Optimized Functional Annotation Of ChIP-seq Data5 versions - Latest release: 3 months ago - 18.1 thousand downloads total - 9 stars on GitHub - 1 maintainer
ChIPanalyser 1.30.0
ChIPanalyser: Predicting Transcription Factor Binding Sites5 versions - Latest release: 3 months ago - 13.1 thousand downloads total - 1 maintainer
profileplyr 1.24.1
Visualization and annotation of read signal over genomic ranges with profileplyr6 versions - Latest release: about 2 months ago - 1 dependent package - 20.9 thousand downloads total - 2 maintainers
motifTestR 1.4.0
Perform key tests for binding motifs in sequence data6 versions - Latest release: 2 months ago - 3.88 thousand downloads total - 1 stars on GitHub - 1 maintainer
qsea 1.34.0
IP-seq data analysis and vizualization5 versions - Latest release: 3 months ago - 15.4 thousand downloads total - 1 maintainer
STAN 2.28.0 removed
The Genomic STate ANnotation Package1 version - Latest release: almost 2 years ago - 14.8 thousand downloads total - 1 maintainer
Related Keywords
Software
11
ChIPSeq
8
DataImport
6
Sequencing
6
Coverage
4
GeneExpression
4
Transcription
4
Preprocessing
3
RNASeq
3
DifferentialExpression
3
Microarray
2
SequenceMatching
2
GeneRegulation
2
epigenetics
2
GenomeAnnotation
2
Normalization
2
HistoneModification
2
Visualization
2
PeakDetection
2
chip-seq
2
QualityControl
2
ImmunoOncology
2
Alignment
2
Annotation
1
peaks
1
DifferentialPeakCalling
1
GO
1
peak
1
Genetics
1
overlapping-peaks
1
ngs-analysis
1
NaturalLanguageProcessing
1
ATACSeq
1
bioconductor
1
bioinformatics
1
c
1
computational-biology
1
functional-annotation
1
r
1
BiologicalQuestion
1
WorkflowStep
1
MotifAnnotation
1
CopyNumberVariation
1
CpGIsland
1
DNAMethylation
1
DifferentialMethylation
1
HiddenMarkovModel
1
AlternativeSplicing
1
Bayesian
1
Clustering
1
DifferentialSplicing
1
ExonArray
1
HTA2.0
1
OneChannel
1
TwoChannel
1
mRNAMicroarray
1
GeneTarget
1
GraphAndNetwork
1
Network
1
Epigenetics
1
Epitranscriptomics
1
FunctionalGenomics
1
FunctionalPrediction
1
SystemsBiology
1
Transcriptomics
1
differential-expression
1
epitranscriptomics
1
genomics
1
genomics-visualization
1
analysis
1
enriched-regions
1
genome-analysis
1
mspc
1
next-generation-sequencing
1