Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
bioconductor.org "ComparativeGenomics" keyword
orthogene 1.8.0
Interspecies gene mapping3 versions - Latest release: 7 months ago - 1 dependent package - 10.4 thousand downloads total - 35 stars on GitHub - 1 maintainer
syntenet 1.4.2
Inference And Analysis Of Synteny Networks4 versions - Latest release: about 1 month ago - 1 dependent package - 3.4 thousand downloads total - 14 stars on GitHub - 1 maintainer
SynExtend 1.14.0
Tools for Working With Synteny Objects3 versions - Latest release: 6 months ago - 4.41 thousand downloads total - 1 maintainer
cbaf 1.24.0
Automated functions for comparing various omic data from cbioportal.org3 versions - Latest release: 6 months ago - 8.7 thousand downloads total - 1 maintainer
AssessORF 1.20.0
Assess Gene Predictions Using Proteomics and Evolutionary Conservation3 versions - Latest release: 6 months ago - 6.79 thousand downloads total - 1 maintainer
phemd 1.18.0
Phenotypic EMD for comparison of single-cell samples3 versions - Latest release: 6 months ago - 5.54 thousand downloads total - 1 maintainer
OmaDB 2.20.0
R wrapper for the OMA REST API3 versions - Latest release: 7 days ago - 2 dependent packages - 11.4 thousand downloads total - 1 stars on GitHub - 2 maintainers
InterMineR 1.26.0
R Interface with InterMine-Powered Databases4 versions - Latest release: 14 days ago - 10.4 thousand downloads total - 17 stars on GitHub - 1 maintainer
cogeqc 1.8.0
Systematic quality checks on comparative genomics analyses4 versions - Latest release: 16 days ago - 2.43 thousand downloads total - 8 stars on GitHub - 1 maintainer
doubletrouble 1.4.0
Identification and classification of duplicated genes6 versions - Latest release: 16 days ago - 1.65 thousand downloads total - 7 stars on GitHub - 1 maintainer
GenomAutomorphism 1.6.0
Compute the automorphisms between DNA's Abelian group representations3 versions - Latest release: 19 days ago - 1.4 thousand downloads total - 0 stars on GitHub - 1 maintainer
MungeSumstats 1.12.0
Standardise summary statistics from GWAS4 versions - Latest release: 22 days ago - 23 thousand downloads total - 64 stars on GitHub - 1 maintainer
Related Keywords
Software
12
Genetics
6
FunctionalGenomics
6
WholeGenome
4
Phylogenetics
4
comparative-genomics
4
rstats
3
Network
3
r
3
Proteomics
3
genomics
3
Visualization
3
bioinformatics
3
Transcriptomics
3
GeneExpression
3
MultipleComparison
2
QualityControl
2
FunctionalPrediction
2
GO
2
GenomeAnnotation
2
Microarray
2
GenomeWideAssociation
2
Clustering
2
SNP
2
evolutionary-genomics
2
SystemsBiology
2
bioconductor-package
2
Preprocessing
2
r-package
2
GeneRegulation
1
GeneSetEnrichment
1
animal-models
1
KEGG
1
Pathways
1
Reactome
1
biology
1
intermine
1
GenomeAssembly
1
Classification
1
gene-duplication
1
molecular-evolution
1
whole-genome-duplication
1
MathematicalBiology
1
MultipleSequenceAlignment
1
genetic-code
1
genetic-code-algebra
1
genome
1
genome-algebra
1
GenomicVariation
1
database-api
1
gwas
1
qtl
1
standardisation
1
summary-statistics
1
vcf-files
1
network-science
1
phylogenomics
1
NetworkInference
1
synteny
1
synteny-network
1
GraphAndNetwork
1
DataImport
1
AssayDomain
1
BiomedicalInformatics
1
DNAMethylation
1
Epigenetics
1
translational-research
1
ResearchField
1
Transcription
1
GenePrediction
1
ontologies
1
genes
1
evolutionary-biology
1
DataRepresentation
1
DimensionReduction
1
biomedicine
1
Sequencing
1
SingleCell
1
Annotation
1
bioconductor
1
AlternativeSplicing
1
DifferentialExpression
1