bioconductor.org "ComparativeGenomics" keyword
AssessORF 1.28.0
Assess Gene Predictions Using Proteomics and Evolutionary Conservation6 versions - Latest release: 3 months ago - 16.3 thousand downloads total - 1 maintainer
orthogene 1.16.1
Interspecies gene mapping8 versions - Latest release: about 1 month ago - 1 dependent package - 29.3 thousand downloads total - 45 stars on GitHub - 1 maintainer
doubletrouble 1.10.0
Identification and classification of duplicated genes13 versions - Latest release: 4 months ago - 8.1 thousand downloads total - 31 stars on GitHub - 1 maintainer
cogeqc 1.14.0
Systematic quality checks on comparative genomics analyses7 versions - Latest release: 4 months ago - 8.74 thousand downloads total - 8 stars on GitHub - 1 maintainer
GenomAutomorphism 1.12.0
Compute the automorphisms between DNA's Abelian group representations7 versions - Latest release: 4 months ago - 7.18 thousand downloads total - 0 stars on GitHub - 1 maintainer
OmaDB 2.26.0
R wrapper for the OMA REST API6 versions - Latest release: 4 months ago - 2 dependent packages - 20.8 thousand downloads total - 2 stars on GitHub - 2 maintainers
syntenet 1.12.0
Inference And Analysis Of Synteny Networks10 versions - Latest release: 4 months ago - 1 dependent package - 11 thousand downloads total - 36 stars on GitHub - 1 maintainer
scoup 1.4.0
Simulate Codons with Darwinian Selection Modelled as an OU Process3 versions - Latest release: 3 months ago - 3.19 thousand downloads total - 0 stars on GitHub - 1 maintainer
CCAFE 1.2.0
Case Control Allele Frequency Estimation2 versions - Latest release: 4 months ago - 2.87 thousand downloads total - 1 stars on GitHub - 1 maintainer
cbaf 1.32.0
Automated functions for comparing various omic data from cbioportal.org7 versions - Latest release: 4 months ago - 15.6 thousand downloads total - 1 maintainer
SynExtend 1.22.0
Tools for Comparative Genomics7 versions - Latest release: 4 months ago - 11.6 thousand downloads total - 1 stars on GitHub - 1 maintainer
MungeSumstats 1.18.1
Standardise summary statistics from GWAS9 versions - Latest release: 22 days ago - 50.3 thousand downloads total - 87 stars on GitHub - 1 maintainer
InterMineR 1.26.0 removed
R Interface with InterMine-Powered Databases4 versions - Latest release: almost 2 years ago - 12 thousand downloads total - 17 stars on GitHub - 1 maintainer
phemd 1.20.0 removed
Phenotypic EMD for comparison of single-cell samples3 versions - Latest release: almost 2 years ago - 5.76 thousand downloads total - 1 maintainer
Related Keywords
Software
14
Genetics
8
FunctionalGenomics
6
WholeGenome
5
Phylogenetics
4
comparative-genomics
4
Network
3
r
3
rstats
3
genomics
3
bioinformatics
3
SNP
3
Transcriptomics
3
Preprocessing
3
GeneExpression
3
Visualization
3
Proteomics
3
GenomeWideAssociation
3
SystemsBiology
2
Clustering
2
MathematicalBiology
2
evolutionary-genomics
2
Microarray
2
GO
2
FunctionalPrediction
2
Classification
2
MultipleComparison
2
r-package
2
DataImport
2
ResearchField
2
Sequencing
2
bioconductor-package
2
QualityControl
2
GenomeAnnotation
2
DNAMethylation
1
Epigenetics
1
Transcription
1
BiomedicalInformatics
1
AssayDomain
1
GenomicVariation
1
database-api
1
SingleCell
1
DimensionReduction
1
DataRepresentation
1
intermine
1
biology
1
Reactome
1
Pathways
1
KEGG
1
GeneSetEnrichment
1
GeneRegulation
1
DifferentialExpression
1
AlternativeSplicing
1
vcf-files
1
summary-statistics
1
standardisation
1
qtl
1
gwas
1
GenePrediction
1
animal-models
1
bioconductor
1
biomedicine
1
evolutionary-biology
1
genes
1
ontologies
1
translational-research
1
gene-duplication
1
molecular-evolution
1
whole-genome-duplication
1
GenomeAssembly
1
MultipleSequenceAlignment
1
genetic-code
1
genetic-code-algebra
1
genome
1
genome-algebra
1
Annotation
1
GraphAndNetwork
1
NetworkInference
1
network-science
1
phylogenomics
1
synteny
1
synteny-network
1
Alignment
1
SequenceMatching
1
StatisticalMethod
1
WorkflowStep
1