bioconductor.org "DataImport" keyword
Top 1.7% on bioconductor.org
13 versions - Latest release: 17 days ago - 28 dependent packages - 2.36 million downloads total - 1 maintainer
ggtree 4.0.5
an R package for visualization of tree and annotation data13 versions - Latest release: 17 days ago - 28 dependent packages - 2.36 million downloads total - 1 maintainer
Top 1.4% on bioconductor.org
6 versions - Latest release: 5 months ago - 47 dependent packages - 2.37 million downloads total - 109 stars on GitHub - 1 maintainer
GEOquery 2.78.0
Get data from NCBI Gene Expression Omnibus (GEO)6 versions - Latest release: 5 months ago - 47 dependent packages - 2.37 million downloads total - 109 stars on GitHub - 1 maintainer
Top 1.5% on bioconductor.org
10 versions - Latest release: 13 days ago - 96 dependent packages - 1.09 million downloads total - 1 maintainer
scater 1.38.1
Single-Cell Analysis Toolkit for Gene Expression Data in R10 versions - Latest release: 13 days ago - 96 dependent packages - 1.09 million downloads total - 1 maintainer
Top 1.3% on bioconductor.org
7 versions - Latest release: 5 months ago - 36 dependent packages - 1.99 million downloads total - 1 maintainer
ShortRead 1.68.0
FASTQ input and manipulation7 versions - Latest release: 5 months ago - 36 dependent packages - 1.99 million downloads total - 1 maintainer
Top 0.6% on bioconductor.org
8 versions - Latest release: 5 months ago - 132 dependent packages - 4.99 million downloads total - 1 maintainer
GenomicAlignments 1.46.0
Representation and manipulation of short genomic alignments8 versions - Latest release: 5 months ago - 132 dependent packages - 4.99 million downloads total - 1 maintainer
Top 0.4% on bioconductor.org
7 versions - Latest release: 3 months ago - 251 dependent packages - 5.22 million downloads total - 1 maintainer
rtracklayer 1.70.1
R interface to genome annotation files and the UCSC genome browser7 versions - Latest release: 3 months ago - 251 dependent packages - 5.22 million downloads total - 1 maintainer
Top 0.2% on bioconductor.org
11 versions - Latest release: 5 months ago - 333 dependent packages - 9.51 million downloads total - 1 maintainer
Biostrings 2.78.0
Efficient manipulation of biological strings11 versions - Latest release: 5 months ago - 333 dependent packages - 9.51 million downloads total - 1 maintainer
Top 0.9% on bioconductor.org
8 versions - Latest release: 5 months ago - 93 dependent packages - 2.1 million downloads total - 1 maintainer
VariantAnnotation 1.56.0
Annotation of Genetic Variants8 versions - Latest release: 5 months ago - 93 dependent packages - 2.1 million downloads total - 1 maintainer
Top 0.3% on bioconductor.org
16 versions - Latest release: 5 months ago - 322 dependent packages - 7.05 million downloads total - 1 maintainer
limma 3.66.0
Linear Models for Microarray and Omics Data16 versions - Latest release: 5 months ago - 322 dependent packages - 7.05 million downloads total - 1 maintainer
easylift 1.8.0
An R package to perform genomic liftover5 versions - Latest release: 4 months ago - 6.33 thousand downloads total - 8 stars on GitHub - 1 maintainer
Top 5.5% on bioconductor.org
7 versions - Latest release: 4 months ago - 3 dependent packages - 78 thousand downloads total - 6 stars on GitHub - 1 maintainer
rpx 2.18.0
R Interface to the ProteomeXchange Repository7 versions - Latest release: 4 months ago - 3 dependent packages - 78 thousand downloads total - 6 stars on GitHub - 1 maintainer
Top 1.4% on bioconductor.org
8 versions - Latest release: 5 months ago - 54 dependent packages - 1.77 million downloads total - 1 maintainer
HDF5Array 1.38.0
HDF5 datasets as array-like objects in R8 versions - Latest release: 5 months ago - 54 dependent packages - 1.77 million downloads total - 1 maintainer
Top 1.0% on bioconductor.org
8 versions - Latest release: 5 months ago - 201 dependent packages - 2.07 million downloads total - 1 maintainer
SingleCellExperiment 1.32.0
S4 Classes for Single Cell Data8 versions - Latest release: 5 months ago - 201 dependent packages - 2.07 million downloads total - 1 maintainer
Top 1.7% on bioconductor.org
11 versions - Latest release: 4 months ago - 69 dependent packages - 3.33 million downloads total - 72 stars on GitHub - 1 maintainer
rhdf5 2.54.1
R Interface to HDF511 versions - Latest release: 4 months ago - 69 dependent packages - 3.33 million downloads total - 72 stars on GitHub - 1 maintainer
Top 1.9% on bioconductor.org
8 versions - Latest release: 5 months ago - 30 dependent packages - 599 thousand downloads total - 123 stars on GitHub - 1 maintainer
MSnbase 2.36.0
Base Functions and Classes for Mass Spectrometry and Proteomics8 versions - Latest release: 5 months ago - 30 dependent packages - 599 thousand downloads total - 123 stars on GitHub - 1 maintainer
Top 9.9% on bioconductor.org
6 versions - Latest release: 5 months ago - 50.2 thousand downloads total - 86 stars on GitHub - 1 maintainer
scmap 1.32.0
A tool for unsupervised projection of single cell RNA-seq data6 versions - Latest release: 5 months ago - 50.2 thousand downloads total - 86 stars on GitHub - 1 maintainer
Top 1.9% on bioconductor.org
8 versions - Latest release: 5 months ago - 31 dependent packages - 950 thousand downloads total - 63 stars on GitHub - 1 maintainer
minfi 1.56.0
Analyze Illumina Infinium DNA methylation arrays8 versions - Latest release: 5 months ago - 31 dependent packages - 950 thousand downloads total - 63 stars on GitHub - 1 maintainer
Top 2.3% on bioconductor.org
8 versions - Latest release: 2 months ago - 13 dependent packages - 563 thousand downloads total - 141 stars on GitHub - 1 maintainer
tximport 1.38.2
Import and summarize transcript-level estimates for transcript- and gene-level analysis8 versions - Latest release: 2 months ago - 13 dependent packages - 563 thousand downloads total - 141 stars on GitHub - 1 maintainer
Top 8.0% on bioconductor.org
7 versions - Latest release: 5 months ago - 15 dependent packages - 1.82 million downloads total - 5 stars on GitHub - 1 maintainer
beachmat 2.26.0
Compiling Bioconductor to Handle Each Matrix Type7 versions - Latest release: 5 months ago - 15 dependent packages - 1.82 million downloads total - 5 stars on GitHub - 1 maintainer
Top 9.0% on bioconductor.org
6 versions - Latest release: 4 months ago - 12 dependent packages - 605 thousand downloads total - 5 stars on GitHub - 1 maintainer
illuminaio 0.52.0
Parsing Illumina Microarray Output Files6 versions - Latest release: 4 months ago - 12 dependent packages - 605 thousand downloads total - 5 stars on GitHub - 1 maintainer
Top 2.0% on bioconductor.org
7 versions - Latest release: 5 months ago - 6 dependent packages - 496 thousand downloads total - 1 maintainer
monocle 2.38.0
Clustering, differential expression, and trajectory analysis for single- cell RNA-Seq7 versions - Latest release: 5 months ago - 6 dependent packages - 496 thousand downloads total - 1 maintainer
HicAggR 1.2.0
Set of 3D genomic interaction analysis tools3 versions - Latest release: over 1 year ago - 1.59 thousand downloads total - 0 stars on GitHub - 1 maintainer
Top 0.4% on bioconductor.org
4 versions - Latest release: over 1 year ago - 212 dependent packages - 4.22 million downloads total - 1 maintainer
Rsamtools 2.22.0
Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import4 versions - Latest release: over 1 year ago - 212 dependent packages - 4.22 million downloads total - 1 maintainer
Top 6.7% on bioconductor.org
6 versions - Latest release: 4 months ago - 7 dependent packages - 71.9 thousand downloads total - 7 stars on GitHub - 1 maintainer
GenomicInteractions 1.44.0
Utilities for handling genomic interaction data6 versions - Latest release: 4 months ago - 7 dependent packages - 71.9 thousand downloads total - 7 stars on GitHub - 1 maintainer
cellmigRation 1.18.0
Track Cells, Analyze Cell Trajectories and Compute Migration Statistics6 versions - Latest release: 5 months ago - 9.05 thousand downloads total - 0 stars on GitHub - 1 maintainer
plotGrouper 1.28.0
Shiny app GUI wrapper for ggplot with built-in statistical analysis6 versions - Latest release: 4 months ago - 12.4 thousand downloads total - 6 stars on GitHub - 1 maintainer
simPIC 1.6.0
Flexible simulation of paired-insertion counts for single-cell ATAC-sequencing data4 versions - Latest release: 4 months ago - 5.25 thousand downloads total - 0 stars on GitHub - 1 maintainer
Top 8.5% on bioconductor.org
6 versions - Latest release: 4 months ago - 2 dependent packages - 48.7 thousand downloads total - 1 maintainer
deepSNV 1.56.0
Detection of subclonal SNVs in deep sequencing data.6 versions - Latest release: 4 months ago - 2 dependent packages - 48.7 thousand downloads total - 1 maintainer
HiCPotts 1.0.0
HiCPotts: Hierarchical Modeling to Identify and Correct Genomic Biases in Hi-C1 version - Latest release: 5 months ago - 1.41 thousand downloads total - 0 stars on GitHub - 1 maintainer
cypress 1.6.0
Cell-Type-Specific Power Assessment4 versions - Latest release: 4 months ago - 5.56 thousand downloads total - 1 stars on GitHub - 1 maintainer
affxparser 1.82.0
Affymetrix File Parsing SDK6 versions - Latest release: 5 months ago - 10 dependent packages - 410 thousand downloads total - 8 stars on GitHub - 1 maintainer
scGPS 1.24.0
A complete analysis of single cell subpopulations, from identifying subpopulations to analysing t...6 versions - Latest release: 4 months ago - 12.8 thousand downloads total - 4 stars on GitHub - 1 maintainer
normr 1.36.0
Normalization and difference calling in ChIP-seq data6 versions - Latest release: 4 months ago - 25 thousand downloads total - 11 stars on GitHub - 1 maintainer
Top 4.1% on bioconductor.org
10 versions - Latest release: 4 months ago - 3 dependent packages - 230 thousand downloads total - 90 stars on GitHub - 1 maintainer
GenomicDataCommons 1.34.1
NIH / NCI Genomic Data Commons Access10 versions - Latest release: 4 months ago - 3 dependent packages - 230 thousand downloads total - 90 stars on GitHub - 1 maintainer
FLAMES 2.4.2
FLAMES: Full Length Analysis of Mutations and Splicing in long read RNA-seq data10 versions - Latest release: about 1 month ago - 14.4 thousand downloads total - 45 stars on GitHub - 1 maintainer
REMP 1.28.0
Repetitive Element Methylation Prediction3 versions - Latest release: almost 2 years ago - 12.8 thousand downloads total - 3 stars on GitHub - 1 maintainer
rmspc 1.16.0
Multiple Sample Peak Calling6 versions - Latest release: 5 months ago - 8.26 thousand downloads total - 20 stars on GitHub - 1 maintainer
TENxIO 1.12.1
Import methods for 10X Genomics files11 versions - Latest release: 3 months ago - 1 dependent package - 9.74 thousand downloads total - 1 stars on GitHub - 1 maintainer
iSEEtree 1.4.0
Interactive visualisation for microbiome data3 versions - Latest release: 5 months ago - 4.54 thousand downloads total - 3 stars on GitHub - 1 maintainer
DNEA 1.0.0
Differential Network Enrichment Analysis for Biological Data1 version - Latest release: 5 months ago - 1.97 thousand downloads total - 3 stars on GitHub - 1 maintainer
Top 3.2% on bioconductor.org
8 versions - Latest release: 5 months ago - 11 dependent packages - 516 thousand downloads total - 3 stars on GitHub - 1 maintainer
oligo 1.74.0
Preprocessing tools for oligonucleotide arrays8 versions - Latest release: 5 months ago - 11 dependent packages - 516 thousand downloads total - 3 stars on GitHub - 1 maintainer
systemPipeTools 1.18.0
Tools for data visualization6 versions - Latest release: 5 months ago - 8.9 thousand downloads total - 1 maintainer
HuBMAPR 1.4.0
Interface to 'HuBMAP'7 versions - Latest release: 5 months ago - 4.21 thousand downloads total - 3 stars on GitHub - 1 maintainer
Top 3.3% on bioconductor.org
7 versions - Latest release: 4 months ago - 12 dependent packages - 209 thousand downloads total - 2 stars on GitHub - 1 maintainer
GenomicFiles 1.46.0
Distributed computing by file or by range7 versions - Latest release: 4 months ago - 12 dependent packages - 209 thousand downloads total - 2 stars on GitHub - 1 maintainer
AlpsNMR 4.12.0
Automated spectraL Processing System for NMR7 versions - Latest release: 4 months ago - 14.2 thousand downloads total - 16 stars on GitHub - 1 maintainer
HiCParser 1.2.0
Parser for HiC data in R2 versions - Latest release: 5 months ago - 2.86 thousand downloads total - 0 stars on GitHub - 1 maintainer
LoomExperiment 1.28.0
LoomExperiment container7 versions - Latest release: 4 months ago - 2 dependent packages - 50.6 thousand downloads total - 1 maintainer
podkat 1.42.0
Position-Dependent Kernel Association Test6 versions - Latest release: 4 months ago - 23.1 thousand downloads total - 0 stars on GitHub - 1 maintainer
alabaster.spatial 1.10.0
Save and Load Spatial 'Omics Data to/from File7 versions - Latest release: 4 months ago - 1 dependent package - 8 thousand downloads total - 1 maintainer
Top 8.3% on bioconductor.org
6 versions - Latest release: 5 months ago - 40.9 thousand downloads total - 1 maintainer
MANOR 1.82.0
CGH Micro-Array NORmalization6 versions - Latest release: 5 months ago - 40.9 thousand downloads total - 1 maintainer
pgxRpi 1.6.0
R wrapper for Progenetix13 versions - Latest release: 4 months ago - 6 thousand downloads total - 3 stars on GitHub - 1 maintainer
eiR 1.50.0
Accelerated similarity searching of small molecules6 versions - Latest release: 4 months ago - 23.6 thousand downloads total - 3 stars on GitHub - 1 maintainer
HiCaptuRe 1.0.0
HiCaptuRe: Manipulating and integrating Capture Hi-C data1 version - Latest release: 5 months ago - 1.28 thousand downloads total - 1 maintainer
Top 3.0% on bioconductor.org
9 versions - Latest release: 4 months ago - 3 dependent packages - 382 thousand downloads total - 1 maintainer
cytolib 2.22.0
C++ infrastructure for representing and interacting with the gated cytometry data9 versions - Latest release: 4 months ago - 3 dependent packages - 382 thousand downloads total - 1 maintainer
qPLEXanalyzer 1.28.2
Tools for quantitative proteomics data analysis7 versions - Latest release: about 1 month ago - 14.5 thousand downloads total - 1 stars on GitHub - 1 maintainer
gypsum 1.6.0
Interface to the gypsum REST API5 versions - Latest release: 4 months ago - 109 thousand downloads total - 1 stars on GitHub - 1 maintainer
rfaRm 1.22.0
An R interface to the Rfam database8 versions - Latest release: 5 months ago - 10.8 thousand downloads total - 2 maintainers
basecallQC 1.34.0
Working with Illumina Basecalling and Demultiplexing input and output files6 versions - Latest release: 4 months ago - 19.1 thousand downloads total - 1 maintainer
MsBackendMgf 1.18.0
Mass Spectrometry Data Backend for Mascot Generic Format (mgf) Files6 versions - Latest release: 5 months ago - 3 dependent packages - 49.1 thousand downloads total - 5 stars on GitHub - 2 maintainers
rBLAST 1.6.0
R Interface for the Basic Local Alignment Search Tool4 versions - Latest release: 5 months ago - 9.01 thousand downloads total - 112 stars on GitHub - 1 maintainer
ISAnalytics 1.20.1
Analyze gene therapy vector insertion sites data identified from genomics next generation sequenc...8 versions - Latest release: about 2 months ago - 10.2 thousand downloads total - 3 stars on GitHub - 1 maintainer
CTDquerier 2.18.0
Package for CTDbase data query, visualization and downstream analysis6 versions - Latest release: 4 months ago - 14.2 thousand downloads total - 1 maintainer
iscream 1.0.0
Make fast and memory efficient BED file queries, summaries and matrices1 version - Latest release: 5 months ago - 1.07 thousand downloads total - 0 stars on GitHub - 1 maintainer
tRNAdbImport 1.28.0
Importing from tRNAdb and mitotRNAdb as GRanges objects7 versions - Latest release: 4 months ago - 1 dependent package - 16.1 thousand downloads total - 0 stars on GitHub - 1 maintainer
GEOfastq 1.18.0
Downloads ENA Fastqs With GEO Accessions6 versions - Latest release: 4 months ago - 9.68 thousand downloads total - 4 stars on GitHub - 1 maintainer
Top 3.2% on bioconductor.org
7 versions - Latest release: 4 months ago - 14 dependent packages - 329 thousand downloads total - 1 maintainer
DropletUtils 1.30.0
Utilities for Handling Single-Cell Droplet Data7 versions - Latest release: 4 months ago - 14 dependent packages - 329 thousand downloads total - 1 maintainer
HiCExperiment 1.10.0
Bioconductor class for interacting with Hi-C files in R6 versions - Latest release: 4 months ago - 2 dependent packages - 11.4 thousand downloads total - 4 stars on GitHub - 1 maintainer
ompBAM 1.14.0
C++ Library for OpenMP-based multi-threaded sequential profiling of Binary Alignment Map (BAM) files6 versions - Latest release: 4 months ago - 1 dependent package - 9.89 thousand downloads total - 4 stars on GitHub - 1 maintainer
biodbChebi 1.16.0
biodbChebi, a library for connecting to the ChEBI Database6 versions - Latest release: 4 months ago - 1 dependent package - 9.01 thousand downloads total - 2 stars on GitHub - 1 maintainer
miaDash 1.2.0
Dashboard for the interactive analysis and exploration of microbiome data2 versions - Latest release: 5 months ago - 2.74 thousand downloads total - 1 stars on GitHub - 1 maintainer
biodbNci 1.13.0
biodbNci, a library for connecting to biodbNci, a library for connecting to the National Cancer I...6 versions - Latest release: 4 months ago - 7.14 thousand downloads total - 1 maintainer
TransView 1.54.0
Read density map construction and accession. Visualization of ChIPSeq and RNASeq data sets8 versions - Latest release: about 1 month ago - 28.9 thousand downloads total - 1 maintainer
sitadela 1.18.0
An R package for the easy provision of simple but complete tab-delimited genomic annotation from ...6 versions - Latest release: 4 months ago - 8.67 thousand downloads total - 0 stars on GitHub - 1 maintainer
SpaceTrooper 1.0.1
SpaceTrooper performs Quality Control analysis of Image-Based spatial2 versions - Latest release: 3 months ago - 2.14 thousand downloads total - 8 stars on GitHub - 1 maintainer
beachmat.tiledb 1.2.0
beachmat bindings for TileDB-backed matrices2 versions - Latest release: 4 months ago - 2.86 thousand downloads total - 0 stars on GitHub - 1 maintainer
ORFik 1.30.2
Open Reading Frames in Genomics13 versions - Latest release: 3 months ago - 2 dependent packages - 33.3 thousand downloads total - 36 stars on GitHub - 1 maintainer
SpatialExperimentIO 1.2.0
Read in Xenium, CosMx, MERSCOPE or STARmapPLUS data as SpatialExperiment object2 versions - Latest release: 4 months ago - 4.21 thousand downloads total - 16 stars on GitHub - 1 maintainer
recoup 1.38.0
An R package for the creation of complex genomic profile plots6 versions - Latest release: 4 months ago - 19.8 thousand downloads total - 1 stars on GitHub - 1 maintainer
scDataviz 1.20.0
scDataviz: single cell dataviz and downstream analyses6 versions - Latest release: 4 months ago - 11.7 thousand downloads total - 66 stars on GitHub - 1 maintainer
iSEEhub 1.12.0
iSEE for the Bioconductor ExperimentHub6 versions - Latest release: 4 months ago - 9.46 thousand downloads total - 3 stars on GitHub - 1 maintainer
periodicDNA 1.20.0
Set of tools to identify periodic occurrences of k-mers in DNA sequences6 versions - Latest release: 5 months ago - 10.5 thousand downloads total - 6 stars on GitHub - 1 maintainer
Top 6.1% on bioconductor.org
6 versions - Latest release: 4 months ago - 1 dependent package - 69.8 thousand downloads total - 6 stars on GitHub - 1 maintainer
fmcsR 1.52.0
Mismatch Tolerant Maximum Common Substructure Searching6 versions - Latest release: 4 months ago - 1 dependent package - 69.8 thousand downloads total - 6 stars on GitHub - 1 maintainer
bugsigdbr 1.16.2
R-side access to published microbial signatures from BugSigDB16 versions - Latest release: about 1 month ago - 20.5 thousand downloads total - 5 stars on GitHub - 1 maintainer
MGnifyR 1.6.1
R interface to EBI MGnify metagenomics resource5 versions - Latest release: about 2 months ago - 6.44 thousand downloads total - 23 stars on GitHub - 1 maintainer
Top 6.0% on bioconductor.org
6 versions - Latest release: 4 months ago - 3 dependent packages - 86 thousand downloads total - 1 maintainer
BioNet 1.70.0
Routines for the functional analysis of biological networks6 versions - Latest release: 4 months ago - 3 dependent packages - 86 thousand downloads total - 1 maintainer
HoloFoodR 1.4.0
R interface to EBI HoloFood resource3 versions - Latest release: 4 months ago - 3.94 thousand downloads total - 2 stars on GitHub - 1 maintainer
Top 6.7% on bioconductor.org
6 versions - Latest release: 4 months ago - 45.6 thousand downloads total - 0 stars on GitHub - 1 maintainer
segmentSeq 2.44.0
Methods for identifying small RNA loci from high-throughput sequencing data6 versions - Latest release: 4 months ago - 45.6 thousand downloads total - 0 stars on GitHub - 1 maintainer
Bioc.gff 1.0.0
Read and write GFF and GTF files1 version - Latest release: 5 months ago - 1.17 thousand downloads total - 0 stars on GitHub - 1 maintainer
Top 6.0% on bioconductor.org
15 versions - Latest release: about 1 month ago - 3 dependent packages - 189 thousand downloads total - 67 stars on GitHub - 1 maintainer
tximeta 1.28.3
Transcript Quantification Import with Automatic Metadata15 versions - Latest release: about 1 month ago - 3 dependent packages - 189 thousand downloads total - 67 stars on GitHub - 1 maintainer
terraTCGAdata 1.14.0
OpenAccess TCGA Data on Terra as MultiAssayExperiment6 versions - Latest release: 4 months ago - 7.76 thousand downloads total - 0 stars on GitHub - 1 maintainer
CAGEfightR 1.30.0
Analysis of Cap Analysis of Gene Expression (CAGE) data using Bioconductor6 versions - Latest release: 4 months ago - 1 dependent package - 31.3 thousand downloads total - 10 stars on GitHub - 1 maintainer
RImmPort 1.38.0
RImmPort: Enabling Ready-for-analysis Immunology Research Data6 versions - Latest release: 5 months ago - 15.9 thousand downloads total - 2 maintainers
sevenC 1.30.0
Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs6 versions - Latest release: 4 months ago - 15.3 thousand downloads total - 13 stars on GitHub - 1 maintainer
gemma.R 3.6.1
A wrapper for Gemma's Restful API to access curated gene expression data and differential express...18 versions - Latest release: about 2 months ago - 9.46 thousand downloads total - 10 stars on GitHub - 1 maintainer
ProteoDisco 1.16.0
Generation of customized protein variant databases from genomic variants, splice-junctions and ma...6 versions - Latest release: 4 months ago - 8.94 thousand downloads total - 5 stars on GitHub - 1 maintainer
OSTA.data 1.2.1
OSTA book data2 versions - Latest release: 4 months ago - 4.09 thousand downloads total - 2 stars on GitHub - 1 maintainer
pfamAnalyzeR 1.10.0
Identification of domain isotypes in pfam data6 versions - Latest release: 4 months ago - 1 dependent package - 16.5 thousand downloads total - 1 stars on GitHub - 1 maintainer
alabaster.vcf 1.10.0
Save and Load Variant Data to/from File6 versions - Latest release: 4 months ago - 1 dependent package - 7.47 thousand downloads total - 1 maintainer
autonomics 1.18.0
Unified Statistical Modeling of Omics Data9 versions - Latest release: 5 months ago - 10.5 thousand downloads total - 3 stars on GitHub - 1 maintainer
APAlyzer 1.23.0
A toolkit for APA analysis using RNA-seq data6 versions - Latest release: 4 months ago - 13.6 thousand downloads total - 4 stars on GitHub - 1 maintainer
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Sequencing
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Infrastructure
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GeneExpression
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DataRepresentation
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ImmunoOncology
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QualityControl
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Preprocessing
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Visualization
71
SingleCell
62
RNASeq
60
Coverage
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Transcriptomics
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Alignment
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Clustering
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DifferentialExpression
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Normalization
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Proteomics
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Genetics
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Microarray
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bioconductor
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MassSpectrometry
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Transcription
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MultipleComparison
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Annotation
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BiomedicalInformatics
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ThirdPartyClient
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TwoChannel
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SequenceMatching
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BatchEffect
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FunctionalGenomics
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OneChannel
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ChIPSeq
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Spatial
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bioinformatics
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TimeCourse
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VariantAnnotation
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AlternativeSplicing
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MethylationArray
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rstats
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ExperimentalDesign
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GraphAndNetwork
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WholeGenome
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