Ecosyste.ms: Packages

Software 220 Sequencing 111 GeneExpression 63 RNASeq 41 ImmunoOncology 41 Microarray 38 SNP 37 Visualization 35 DataImport 35 MultipleComparison 34 DifferentialExpression 32 Transcription 31 Coverage 31 Annotation 27 Alignment 26 GeneticVariability 24 QualityControl 24 ChIPSeq 23 StatisticalMethod 23 Clustering 20 Transcriptomics 20 CopyNumberVariation 19 Preprocessing 19 BiomedicalInformatics 19 Epigenetics 19 GeneSetEnrichment 18 Regression 18 Infrastructure 18 Bayesian 17 GenomeWideAssociation 17 SystemsBiology 17 FunctionalGenomics 16 Pathways 16 GenomicVariation 16 GeneRegulation 16 SequenceMatching 16 Classification 15 SingleCell 15 DataRepresentation 15 r 14 Proteomics 14 DNAMethylation 14 GenomeAnnotation 13 CellBiology 13 DNASeq 13 WholeGenome 12 VariantAnnotation 11 GO 10 Network 10 Normalization 10 AlternativeSplicing 10 bioinformatics 9 GraphAndNetwork 9 FeatureExtraction 9 bioconductor 8 DifferentialSplicing 8 HiddenMarkovModel 7 Metabolomics 7 MethylSeq 7 TimeCourse 7 GeneTarget 7 BatchEffect 7 bioconductor-package 6 ComparativeGenomics 6 r-package 6 MathematicalBiology 6 KEGG 6 DifferentialMethylation 6 TwoChannel 5 mRNAMicroarray 5 OneChannel 5 VariantDetection 5 SomaticMutation 5 PeakDetection 5 aCGH 5 gwas 4 genomics 4 FunctionalPrediction 4 DimensionReduction 4 genetics 4 GUI 4 ATACSeq 4 GenePrediction 4 PrincipalComponent 4 ExomeSeq 4 snp 4 BiologicalQuestion 4 NetworkInference 4 RiboSeq 3 WorkflowStep 3 AnnotationData 3 ShinyApps 3 ResearchField 3 MassSpectrometry 3 MethylationArray 3 rna-seq 3 NucleosomePositioning 3 DifferentialPeakCalling 3 LinkageDisequilibrium 3 PatternLogic 2