bioconductor.org "HistoneModification" keyword
Top 2.4% on bioconductor.org
6 versions - Latest release: 3 months ago - 2 dependent packages - 302 thousand downloads total - 1 maintainer
DiffBind 3.20.0
Differential Binding Analysis of ChIP-Seq Peak Data6 versions - Latest release: 3 months ago - 2 dependent packages - 302 thousand downloads total - 1 maintainer
chromstaR 1.34.0 removed
Combinatorial and Differential Chromatin State Analysis for ChIP-Seq Data5 versions - Latest release: 10 months ago - 19.7 thousand downloads total - 8 stars on GitHub - 1 maintainer
geneXtendeR 1.36.0
Optimized Functional Annotation Of ChIP-seq Data6 versions - Latest release: 3 months ago - 20.7 thousand downloads total - 9 stars on GitHub - 1 maintainer
crupR 1.2.0
An R package to predict condition-specific enhancers from ChIP-seq data2 versions - Latest release: 3 months ago - 2.37 thousand downloads total - 0 stars on GitHub - 1 maintainer
TENET 1.2.0
R package for TENET (Tracing regulatory Element Networks using Epigenetic Traits) to identify key...3 versions - Latest release: 3 months ago - 2.42 thousand downloads total - 1 stars on GitHub - 1 maintainer
chromswitch 1.22.0 removed
An R package to detect chromatin state switches from epigenomic data1 version - Latest release: over 2 years ago - 7.34 thousand downloads total - 4 stars on GitHub - 1 maintainer
nullranges 1.16.3
Generation of null ranges via bootstrapping or covariate matching7 versions - Latest release: 2 months ago - 1 dependent package - 15.4 thousand downloads total - 22 stars on GitHub - 1 maintainer
epidecodeR 1.18.0
epidecodeR: a functional exploration tool for epigenetic and epitranscriptomic regulation6 versions - Latest release: 4 months ago - 8.31 thousand downloads total - 3 stars on GitHub - 1 maintainer
chipenrich 2.34.0
Gene Set Enrichment For ChIP-seq Peak Data6 versions - Latest release: 3 months ago - 37.4 thousand downloads total - 1 maintainer
segmenter 1.16.0
Perform Chromatin Segmentation Analysis in R by Calling ChromHMM6 versions - Latest release: 3 months ago - 7.9 thousand downloads total - 3 stars on GitHub - 1 maintainer
Related Keywords
Software
10
Epigenetics
6
FunctionalGenomics
6
ChIPSeq
5
DifferentialPeakCalling
5
bioconductor
4
GeneRegulation
4
MultipleComparison
4
PeakDetection
4
GeneTarget
3
GeneExpression
3
Visualization
3
Transcription
3
ImmunoOncology
3
Sequencing
3
ATACSeq
3
FunctionalPrediction
2
r
2
genomics
2
epigenetics
2
DifferentialExpression
2
chip-seq
2
BiomedicalInformatics
2
bioinformatics
2
CellBiology
2
DNaseSeq
2
GenomeAnnotation
2
Genetics
2
RNASeq
2
DifferentialMethylation
2
ChipOnChip
2
Annotation
2
MethylSeq
2
HiddenMarkovModel
2
GeneSetEnrichment
2
Transcriptomics
2
bootstrap
1
GenomeWideAssociation
1
epigenomics
1
matching
1
statistics
1
Epitranscriptomics
1
SystemsBiology
1
differential-expression
1
epitranscriptomics
1
genomics-visualization
1
Regression
1
chromhmm
1
segmentation-an
1
Clustering
1
Survival
1
MethylationArray
1
DNAMethylation
1
functional-annotation
1
computational-biology
1
c
1
NaturalLanguageProcessing
1
GO
1
DataImport
1
Coverage
1
ReportWriting
1
RIPSeq
1
Normalization
1