bioconductor.org "HistoneModification" keyword
geneXtendeR 1.37.0
Optimized Functional Annotation Of ChIP-seq Data7 versions - Latest release: 2 days ago - 22.6 thousand downloads total - 9 stars on GitHub - 1 maintainer
segmenter 1.18.0
Perform Chromatin Segmentation Analysis in R by Calling ChromHMM7 versions - Latest release: 17 days ago - 9.53 thousand downloads total - 3 stars on GitHub - 1 maintainer
epidecodeR 1.20.0
epidecodeR: a functional exploration tool for epigenetic and epitranscriptomic regulation7 versions - Latest release: 20 days ago - 9.83 thousand downloads total - 3 stars on GitHub - 1 maintainer
nullranges 1.18.0
Generation of null ranges via bootstrapping or covariate matching8 versions - Latest release: 21 days ago - 1 dependent package - 17.5 thousand downloads total - 22 stars on GitHub - 1 maintainer
Top 2.4% on bioconductor.org
7 versions - Latest release: 23 days ago - 2 dependent packages - 311 thousand downloads total - 1 maintainer
DiffBind 3.22.1
Differential Binding Analysis of ChIP-Seq Peak Data7 versions - Latest release: 23 days ago - 2 dependent packages - 311 thousand downloads total - 1 maintainer
crupR 1.4.0
An R package to predict condition-specific enhancers from ChIP-seq data3 versions - Latest release: 24 days ago - 3.05 thousand downloads total - 0 stars on GitHub - 1 maintainer
TENET 1.4.0
R package for TENET (Tracing regulatory Element Networks using Epigenetic Traits) to identify key...4 versions - Latest release: 25 days ago - 3.19 thousand downloads total - 1 stars on GitHub - 1 maintainer
epiRomics 1.0.0
Epigenomic Analysis Package Built for R (epiRomics)1 version - Latest release: 27 days ago - 33 downloads total - 1 maintainer
chipenrich 2.34.0
Gene Set Enrichment For ChIP-seq Peak Data6 versions - Latest release: 6 months ago - 39.1 thousand downloads total - 1 maintainer
chromstaR 1.34.0 removed
Combinatorial and Differential Chromatin State Analysis for ChIP-Seq Data5 versions - Latest release: about 1 year ago - 19.7 thousand downloads total - 8 stars on GitHub - 1 maintainer
chromswitch 1.22.0 removed
An R package to detect chromatin state switches from epigenomic data1 version - Latest release: over 2 years ago - 7.34 thousand downloads total - 4 stars on GitHub - 1 maintainer
Related Keywords
Software
11
FunctionalGenomics
7
Epigenetics
7
ChIPSeq
6
GeneRegulation
5
DifferentialPeakCalling
5
Transcription
4
ATACSeq
4
bioconductor
4
Visualization
4
PeakDetection
4
Sequencing
4
MultipleComparison
4
ImmunoOncology
3
GeneExpression
3
GeneTarget
3
RNASeq
3
GeneSetEnrichment
2
DNaseSeq
2
DifferentialMethylation
2
genomics
2
Transcriptomics
2
MethylSeq
2
HiddenMarkovModel
2
CellBiology
2
BiomedicalInformatics
2
FunctionalPrediction
2
GenomeAnnotation
2
Genetics
2
bioinformatics
2
chip-seq
2
epigenetics
2
ChipOnChip
2
r
2
Annotation
2
DifferentialExpression
2
Survival
1
MethylationArray
1
DNAMethylation
1
ReportWriting
1
Regression
1
RIPSeq
1
Normalization
1
Clustering
1
Coverage
1
DataImport
1
GO
1
epigenomics
1
statistics
1
matching
1
bootstrap
1
NaturalLanguageProcessing
1
GenomeWideAssociation
1
c
1
computational-biology
1
genomics-visualization
1
functional-annotation
1
epitranscriptomics
1
differential-expression
1
chromhmm
1
SystemsBiology
1
segmentation-an
1
Epitranscriptomics
1