bioconductor.org "MotifDiscovery" keyword
View the packages on the bioconductor.org package registry that are tagged with the "MotifDiscovery" keyword.
MotifPeeker 1.0.0
Benchmarking Epigenomic Profiling Methods Using Motif Enrichment1 version - Latest release: 3 months ago - 1.48 thousand downloads total - 2 stars on GitHub - 1 maintainer
seqArchR 1.12.0
Identify Different Architectures of Sequence Elements5 versions - Latest release: 3 months ago - 1 dependent package - 6.34 thousand downloads total - 1 stars on GitHub - 1 maintainer
memes 1.16.0
motif matching, comparison, and de novo discovery using the MEME Suite5 versions - Latest release: 3 months ago - 17.2 thousand downloads total - 43 stars on GitHub - 1 maintainer
Top 4.5% on bioconductor.org
5 versions - Latest release: 2 months ago - 17 dependent packages - 392 thousand downloads total - 29 stars on GitHub - 1 maintainer
TFBSTools 1.46.0
Software Package for Transcription Factor Binding Site (TFBS) Analysis5 versions - Latest release: 2 months ago - 17 dependent packages - 392 thousand downloads total - 29 stars on GitHub - 1 maintainer
sarks 1.20.0
Suffix Array Kernel Smoothing for discovery of correlative sequence motifs and multi-motif domains5 versions - Latest release: 3 months ago - 7.71 thousand downloads total - 1 maintainer
universalmotif 1.26.2
Import, Modify, and Export Motifs with R7 versions - Latest release: 3 months ago - 4 dependent packages - 55.3 thousand downloads total - 1 maintainer
RCAS 1.34.0
RNA Centric Annotation System6 versions - Latest release: 3 months ago - 1 dependent package - 20.4 thousand downloads total - 1 maintainer
omicsViewer 1.12.0
Interactive and explorative visualization of SummarizedExperssionSet or ExpressionSet using omics...5 versions - Latest release: 3 months ago - 6.31 thousand downloads total - 4 stars on GitHub - 1 maintainer
Top 3.4% on bioconductor.org
5 versions - Latest release: 3 months ago - 1 dependent package - 101 thousand downloads total - 1 maintainer
rGADEM 2.55.0
de novo motif discovery5 versions - Latest release: 3 months ago - 1 dependent package - 101 thousand downloads total - 1 maintainer
SELEX 1.40.0
Functions for analyzing SELEX-seq data5 versions - Latest release: 3 months ago - 17.2 thousand downloads total - 1 maintainer
pqsfinder 2.24.0
Identification of potential quadruplex forming sequences5 versions - Latest release: 3 months ago - 18.1 thousand downloads total - 1 maintainer
magrene 1.10.0
Motif Analysis In Gene Regulatory Networks5 versions - Latest release: 3 months ago - 4.74 thousand downloads total - 1 stars on GitHub - 1 maintainer
nearBynding 1.18.0
Discern RNA structure proximal to protein binding5 versions - Latest release: 3 months ago - 7.28 thousand downloads total - 1 maintainer
periodicDNA 1.18.0
Set of tools to identify periodic occurrences of k-mers in DNA sequences5 versions - Latest release: 3 months ago - 7.21 thousand downloads total - 6 stars on GitHub - 1 maintainer
Top 9.9% on bioconductor.org
5 versions - Latest release: 3 months ago - 43.8 thousand downloads total - 1 maintainer
BCRANK 1.70.0
Predicting binding site consensus from ranked DNA sequences5 versions - Latest release: 3 months ago - 43.8 thousand downloads total - 1 maintainer
Related Keywords
Software
15
GeneRegulation
8
MotifAnnotation
6
SequenceMatching
4
Transcriptomics
3
DataImport
3
Alignment
3
Coverage
2
GeneSetEnrichment
2
Transcription
2
NetworkEnrichment
2
Visualization
2
DifferentialExpression
2
SystemsBiology
2
FeatureExtraction
2
Sequencing
2
Clustering
2
r-package
2
ChIPSeq
2
FunctionalGenomics
2
Genetics
2
MultipleComparison
2
Epigenetics
1
StructuralPrediction
1
RNASeq
1
GO
1
DataRepresentation
1
GeneTarget
1
GenomeAnnotation
1
Network
1
rstats
1
network-science
1
network-motifs
1
motif-analysis
1
ChIPchip
1
gene-regulatory-network
1
GraphAndNetwork
1
Microarray
1
QualityControl
1
bioconductor
1
bioconductor-package
1
chip-seq
1
epigenomics
1
interactive-report
1
motif-enrichment-analysis
1
DNASeq
1
DimensionReduction
1
MathematicalBiology
1
clustering
1
nmf
1
nonnegative-matrix-factorization
1
promoter-sequence-architectures
1
r
1
scikit-learn
1
sequence-analysis
1
sequence-architectures
1
unsupervised-machine-learning
1
GeneExpression
1