bioconductor.org "Phylogenetics" keyword
View the packages on the bioconductor.org package registry that are tagged with the "Phylogenetics" keyword.
Top 1.7% on bioconductor.org
8 versions - Latest release: 9 days ago - 28 dependent packages - 1.69 million downloads total - 1 maintainer
ggtree 3.16.3
an R package for visualization of tree and annotation data8 versions - Latest release: 9 days ago - 28 dependent packages - 1.69 million downloads total - 1 maintainer
ggtreeSpace 1.4.0
Visualizing Phylomorphospaces using 'ggtree'3 versions - Latest release: 3 months ago - 3.22 thousand downloads total - 5 stars on GitHub - 1 maintainer
doubletrouble 1.8.0
Identification and classification of duplicated genes11 versions - Latest release: 3 months ago - 5.74 thousand downloads total - 27 stars on GitHub - 1 maintainer
cogeqc 1.12.0
Systematic quality checks on comparative genomics analyses6 versions - Latest release: 3 months ago - 6.54 thousand downloads total - 8 stars on GitHub - 1 maintainer
syntenet 1.10.0
Inference And Analysis Of Synteny Networks8 versions - Latest release: 3 months ago - 1 dependent package - 7.84 thousand downloads total - 30 stars on GitHub - 1 maintainer
Top 3.1% on bioconductor.org
5 versions - Latest release: 3 months ago - 7 dependent packages - 1.4 million downloads total - 1 maintainer
treeio 1.32.0
Base Classes and Functions for Phylogenetic Tree Input and Output5 versions - Latest release: 3 months ago - 7 dependent packages - 1.4 million downloads total - 1 maintainer
tanggle 1.14.0
Visualization of Phylogenetic Networks5 versions - Latest release: 3 months ago - 6.53 thousand downloads total - 10 stars on GitHub - 1 maintainer
orthogene 1.14.0
Interspecies gene mapping5 versions - Latest release: 3 months ago - 1 dependent package - 19.7 thousand downloads total - 43 stars on GitHub - 1 maintainer
fastreeR 1.12.2
Phylogenetic, Distance and Other Calculations on VCF and Fasta Files6 versions - Latest release: 22 days ago - 6.81 thousand downloads total - 18 stars on GitHub - 1 maintainer
sitePath 1.24.0
Phylogeny-based sequence clustering with site polymorphism5 versions - Latest release: 3 months ago - 8.99 thousand downloads total - 9 stars on GitHub - 1 maintainer
ggtreeDendro 1.10.0
Drawing 'dendrogram' using 'ggtree'5 versions - Latest release: 3 months ago - 5.11 thousand downloads total - 1 maintainer
CIMICE 1.16.0
CIMICE-R: (Markov) Chain Method to Inferr Cancer Evolution5 versions - Latest release: 3 months ago - 6.55 thousand downloads total - 0 stars on GitHub - 1 maintainer
rhinotypeR 1.2.0
Rhinovirus genotyping2 versions - Latest release: 3 months ago - 1.58 thousand downloads total - 4 stars on GitHub - 1 maintainer
Top 9.0% on bioconductor.org
5 versions - Latest release: 3 months ago - 3 dependent packages - 58.7 thousand downloads total - 94 stars on GitHub - 1 maintainer
ggtreeExtra 1.18.0
An R Package To Add Geometric Layers On Circular Or Other Layout Tree Of "ggtree"5 versions - Latest release: 3 months ago - 3 dependent packages - 58.7 thousand downloads total - 94 stars on GitHub - 1 maintainer
Related Keywords
Software
14
Clustering
5
Visualization
5
comparative-genomics
4
ComparativeGenomics
4
MultipleSequenceAlignment
4
Annotation
4
Alignment
4
DataImport
3
FunctionalGenomics
3
Network
3
rstats
3
evolutionary-genomics
2
GraphAndNetwork
2
NetworkInference
2
Genetics
2
bioinformatics
2
WholeGenome
2
Classification
2
r-package
1
translational-research
1
Metagenomics
1
r
1
ontologies
1
genomics
1
genes
1
evolutionary-biology
1
ReproducibleResearch
1
SNP
1
mutation
1
phylogenetics
1
DecisionTree
1
BiologicalQuestion
1
ResearchField
1
SingleCell
1
StatisticalMethod
1
Technology
1
Sequencing
1
gene-duplication
1
molecular-evolution
1
whole-genome-duplication
1
GenomeAssembly
1
QualityControl
1
SystemsBiology
1
network-science
1
phylogenomics
1
synteny
1
synteny-network
1
DataRepresentation
1
GeneExpression
1
Preprocessing
1
Transcriptomics
1
animal-models
1
bioconductor
1
bioconductor-package
1
biomedicine
1