bioconductor.org "Technology" keyword
wavClusteR 2.44.0
Sensitive and highly resolved identification of RNA-protein interaction sites in PAR-CLIP data6 versions - Latest release: 3 months ago - 25.8 thousand downloads total - 1 maintainer
nondetects 2.40.0
Non-detects in qPCR data7 versions - Latest release: 3 months ago - 24.8 thousand downloads total - 1 maintainer
optimalFlow 1.22.0
optimalFlow6 versions - Latest release: 3 months ago - 10 thousand downloads total - 1 maintainer
MPAC 1.4.0
Multi-omic Pathway Analysis of Cells3 versions - Latest release: 4 months ago - 3.7 thousand downloads total - 0 stars on GitHub - 1 maintainer
MDTS 1.30.0
Detection of de novo deletion in targeted sequencing trios6 versions - Latest release: 3 months ago - 13.8 thousand downloads total - 1 maintainer
LymphoSeq 1.38.0
Analyze high-throughput sequencing of T and B cell receptors6 versions - Latest release: 3 months ago - 19.6 thousand downloads total - 1 maintainer
DMRScan 1.32.0
Detection of Differentially Methylated Regions6 versions - Latest release: 4 months ago - 16.1 thousand downloads total - 2 stars on GitHub - 1 maintainer
ORFhunteR 1.18.0
Predict open reading frames in nucleotide sequences6 versions - Latest release: 3 months ago - 9.17 thousand downloads total - 1 stars on GitHub - 1 maintainer
metapone 1.16.0
Conducts pathway test of metabolomics data using a weighted permutation test6 versions - Latest release: 3 months ago - 8.49 thousand downloads total - 1 maintainer
MetID 1.28.0
Network-based prioritization of putative metabolite IDs6 versions - Latest release: 4 months ago - 12.1 thousand downloads total - 1 stars on GitHub - 1 maintainer
openPrimeR 1.32.0
Multiplex PCR Primer Design and Analysis7 versions - Latest release: 3 months ago - 1 dependent package - 21.6 thousand downloads total - 1 maintainer
HiCBricks 1.28.0
Framework for Storing and Accessing Hi-C Data Through HDF Files6 versions - Latest release: 3 months ago - 1 dependent package - 16.7 thousand downloads total - 1 maintainer
BioGA 1.4.0
Bioinformatics Genetic Algorithm (BioGA)3 versions - Latest release: 4 months ago - 3.71 thousand downloads total - 0 stars on GitHub - 1 maintainer
Top 5.5% on bioconductor.org
6 versions - Latest release: 4 months ago - 60.7 thousand downloads total - 2 stars on GitHub - 2 maintainers
dupRadar 1.40.0
Assessment of duplication rates in RNA-Seq datasets6 versions - Latest release: 4 months ago - 60.7 thousand downloads total - 2 stars on GitHub - 2 maintainers
Top 9.3% on bioconductor.org
6 versions - Latest release: 3 months ago - 33.5 thousand downloads total - 1 maintainer
spkTools 1.66.0
Methods for Spike-in Arrays6 versions - Latest release: 3 months ago - 33.5 thousand downloads total - 1 maintainer
CoverageView 1.48.0
Coverage visualization package for R6 versions - Latest release: 4 months ago - 28.3 thousand downloads total - 1 maintainer
CIMICE 1.18.0
CIMICE-R: (Markov) Chain Method to Inferr Cancer Evolution6 versions - Latest release: 4 months ago - 8.64 thousand downloads total - 0 stars on GitHub - 1 maintainer
consICA 2.8.0
consensus Independent Component Analysis6 versions - Latest release: 4 months ago - 8.87 thousand downloads total - 0 stars on GitHub - 1 maintainer
scruff 1.28.0
Single Cell RNA-Seq UMI Filtering Facilitator (scruff)7 versions - Latest release: 4 months ago - 14.6 thousand downloads total - 8 stars on GitHub - 1 maintainer
pram 1.26.0
Pooling RNA-seq datasets for assembling transcript models6 versions - Latest release: 3 months ago - 11.5 thousand downloads total - 1 stars on GitHub - 1 maintainer
Top 5.1% on bioconductor.org
6 versions - Latest release: 3 months ago - 1 dependent package - 56 thousand downloads total - 1 maintainer
ACME 2.66.0
Algorithms for Calculating Microarray Enrichment (ACME)6 versions - Latest release: 3 months ago - 1 dependent package - 56 thousand downloads total - 1 maintainer
iGC 1.36.0
An integrated analysis package of Gene expression and Copy number alteration4 versions - Latest release: about 1 year ago - 13.3 thousand downloads total - 1 stars on GitHub - 1 maintainer
seq.hotSPOT 1.10.0
Targeted sequencing panel design based on mutation hotspots6 versions - Latest release: 3 months ago - 5.78 thousand downloads total - 0 stars on GitHub - 1 maintainer
CellaRepertorium 1.16.0 removed
Data structures, clustering and testing for single cell immune receptor repertoires (scRNAseq Rep...4 versions - Latest release: over 1 year ago - 4.59 thousand downloads total - 15 stars on GitHub - 1 maintainer
TAPseq 1.22.1
Targeted scRNA-seq primer design for TAP-seq8 versions - Latest release: about 1 month ago - 11.3 thousand downloads total - 4 stars on GitHub - 1 maintainer
amplican 1.32.1
Automated analysis of CRISPR experiments6 versions - Latest release: 3 months ago - 22.1 thousand downloads total - 9 stars on GitHub - 1 maintainer
IFAA 1.12.0
Robust Inference for Absolute Abundance in Microbiome Analysis6 versions - Latest release: 3 months ago - 30.4 thousand downloads total - 1 maintainer
compSPOT 1.8.0
compSPOT: Tool for identifying and comparing significantly mutated genomic hotspots5 versions - Latest release: 4 months ago - 5.28 thousand downloads total - 0 stars on GitHub - 1 maintainer
openPrimeRui 1.26.0 removed
Shiny Application for Multiplex PCR Primer Design and Analysis3 versions - Latest release: almost 2 years ago - 9.56 thousand downloads total - 1 maintainer
Related Keywords
Software
29
Sequencing
17
RNASeq
9
ImmunoOncology
7
StatisticalMethod
5
SingleCell
5
WorkflowStep
4
ResearchField
4
Microarray
3
AssayDomain
3
Transcriptomics
3
BiologicalQuestion
3
MultipleComparison
3
TargetedResequencing
3
Alignment
3
WholeGenome
3
Classification
3
Visualization
2
Infrastructure
2
QualityControl
2
DNASeq
2
FeatureExtraction
2
CRISPR
2
DataImport
2
Coverage
2
Survival
2
Clustering
2
qPCR
2
Preprocessing
2
GeneExpression
2
GenomeAnnotation
1
bioconductor-package
1
genome-annotation
1
GenePrediction
1
umi
1
single-cell
1
scrna-seq
1
r-package
1
rna-seq
1
transcript-model
1
Normalization
1
Biological Question
1
CopyNumberVariation
1
DifferentialExpression
1
Genetics
1
GenomicVariation
1
PooledScreens
1
Microbiome
1
Regression
1
Bayesian
1
RIPSeq
1
FlowCytometry
1
MultipleSequenceAlignment
1
MassSpectrometry
1
Metabolomics
1
Pathways
1
KEGG
1
Network
1
HiC
1
ExperimentalDesign
1
data-analysis
1
gene-expression
1
genetic-algorithms
1
genomics
1
optimization-algorithms
1
ChIPSeq
1
GraphAndNetwork
1
NetworkInference
1
Phylogenetics
1
bioinformatics
1