bioconductor.org "Technology" keyword
View the packages on the bioconductor.org package registry that are tagged with the "Technology" keyword.
seq.hotSPOT 1.8.0
Targeted sequencing panel design based on mutation hotspots5 versions - Latest release: 5 months ago - 4.54 thousand downloads total - 0 stars on GitHub - 1 maintainer
TAPseq 1.20.0
Targeted scRNA-seq primer design for TAP-seq6 versions - Latest release: 4 months ago - 9.47 thousand downloads total - 4 stars on GitHub - 1 maintainer
pram 1.24.0
Pooling RNA-seq datasets for assembling transcript models5 versions - Latest release: 4 months ago - 9.8 thousand downloads total - 1 stars on GitHub - 1 maintainer
Top 5.5% on bioconductor.org
5 versions - Latest release: 4 months ago - 57.6 thousand downloads total - 2 stars on GitHub - 2 maintainers
dupRadar 1.38.0
Assessment of duplication rates in RNA-Seq datasets5 versions - Latest release: 4 months ago - 57.6 thousand downloads total - 2 stars on GitHub - 2 maintainers
LymphoSeq 1.36.0
Analyze high-throughput sequencing of T and B cell receptors5 versions - Latest release: 4 months ago - 17.2 thousand downloads total - 1 maintainer
compSPOT 1.6.0
compSPOT: Tool for identifying and comparing significantly mutated genomic hotspots4 versions - Latest release: 5 months ago - 4.08 thousand downloads total - 0 stars on GitHub - 1 maintainer
CIMICE 1.16.0
CIMICE-R: (Markov) Chain Method to Inferr Cancer Evolution5 versions - Latest release: 4 months ago - 7.1 thousand downloads total - 0 stars on GitHub - 1 maintainer
nondetects 2.38.1
Non-detects in qPCR data6 versions - Latest release: 3 months ago - 22 thousand downloads total - 1 maintainer
metapone 1.14.0
Conducts pathway test of metabolomics data using a weighted permutation test5 versions - Latest release: 4 months ago - 6.8 thousand downloads total - 1 maintainer
HiCBricks 1.26.0
Framework for Storing and Accessing Hi-C Data Through HDF Files5 versions - Latest release: 4 months ago - 1 dependent package - 13.9 thousand downloads total - 1 maintainer
Top 9.3% on bioconductor.org
5 versions - Latest release: 4 months ago - 31 thousand downloads total - 1 maintainer
spkTools 1.64.0
Methods for Spike-in Arrays5 versions - Latest release: 4 months ago - 31 thousand downloads total - 1 maintainer
Top 5.1% on bioconductor.org
5 versions - Latest release: 4 months ago - 1 dependent package - 50.4 thousand downloads total - 1 maintainer
ACME 2.64.0
Algorithms for Calculating Microarray Enrichment (ACME)5 versions - Latest release: 4 months ago - 1 dependent package - 50.4 thousand downloads total - 1 maintainer
wavClusteR 2.42.0
Sensitive and highly resolved identification of RNA-protein interaction sites in PAR-CLIP data5 versions - Latest release: 4 months ago - 23.2 thousand downloads total - 1 maintainer
ORFhunteR 1.16.0
Predict open reading frames in nucleotide sequences5 versions - Latest release: 4 months ago - 7.32 thousand downloads total - 1 stars on GitHub - 1 maintainer
openPrimeR 1.30.1
Multiplex PCR Primer Design and Analysis6 versions - Latest release: about 1 month ago - 1 dependent package - 18.9 thousand downloads total - 1 maintainer
DMRScan 1.30.0
Detection of Differentially Methylated Regions5 versions - Latest release: 5 months ago - 13.2 thousand downloads total - 2 stars on GitHub - 1 maintainer
IFAA 1.10.0
Robust Inference for Absolute Abundance in Microbiome Analysis5 versions - Latest release: 4 months ago - 28.9 thousand downloads total - 1 maintainer
MPAC 1.2.0
Multi-omic Pathway Analysis of Cells2 versions - Latest release: 4 months ago - 2.34 thousand downloads total - 0 stars on GitHub - 1 maintainer
optimalFlow 1.20.0
optimalFlow5 versions - Latest release: 4 months ago - 8.21 thousand downloads total - 1 maintainer
amplican 1.30.0
Automated analysis of CRISPR experiments5 versions - Latest release: 4 months ago - 19.1 thousand downloads total - 9 stars on GitHub - 1 maintainer
BioGA 1.2.0
Bioinformatics Genetic Algorithm (BioGA)2 versions - Latest release: 4 months ago - 2.39 thousand downloads total - 0 stars on GitHub - 1 maintainer
scruff 1.26.0
Single Cell RNA-Seq UMI Filtering Facilitator (scruff)5 versions - Latest release: 4 months ago - 12.3 thousand downloads total - 8 stars on GitHub - 1 maintainer
consICA 2.6.0
consensus Independent Component Analysis5 versions - Latest release: 4 months ago - 7.09 thousand downloads total - 0 stars on GitHub - 1 maintainer
MetID 1.26.0
Network-based prioritization of putative metabolite IDs5 versions - Latest release: 4 months ago - 9.97 thousand downloads total - 1 stars on GitHub - 1 maintainer
CoverageView 1.46.0
Coverage visualization package for R5 versions - Latest release: 4 months ago - 25 thousand downloads total - 1 maintainer
MDTS 1.28.0
Detection of de novo deletion in targeted sequencing trios5 versions - Latest release: 4 months ago - 11.4 thousand downloads total - 1 maintainer
CellaRepertorium 1.16.0 removed
Data structures, clustering and testing for single cell immune receptor repertoires (scRNAseq Rep...4 versions - Latest release: 10 months ago - 4.59 thousand downloads total - 15 stars on GitHub - 1 maintainer
iGC 1.36.0
An integrated analysis package of Gene expression and Copy number alteration4 versions - Latest release: 9 months ago - 13.3 thousand downloads total - 1 stars on GitHub - 1 maintainer
openPrimeRui 1.26.0 removed
Shiny Application for Multiplex PCR Primer Design and Analysis3 versions - Latest release: over 1 year ago - 9.56 thousand downloads total - 1 maintainer
Related Keywords
Software
29
Sequencing
17
RNASeq
9
ImmunoOncology
7
SingleCell
5
StatisticalMethod
5
ResearchField
4
WorkflowStep
4
Classification
3
MultipleComparison
3
BiologicalQuestion
3
Microarray
3
TargetedResequencing
3
WholeGenome
3
Transcriptomics
3
AssayDomain
3
Alignment
3
GeneExpression
2
Preprocessing
2
qPCR
2
Visualization
2
DataImport
2
Infrastructure
2
FeatureExtraction
2
Coverage
2
Clustering
2
DNASeq
2
CRISPR
2
Survival
2
QualityControl
2
FlowCytometry
1
GenomicVariation
1
ExperimentalDesign
1
data-analysis
1
gene-expression
1
Genetics
1
DifferentialExpression
1
genetic-algorithms
1
CopyNumberVariation
1
genomics
1
optimization-algorithms
1
Biological Question
1
ChIPSeq
1
Network
1
KEGG
1
umi
1
bioinformatics
1
scrna-seq
1
single-cell
1
PooledScreens
1
GenePrediction
1
GenomeAnnotation
1
bioconductor-package
1
genome-annotation
1
r-package
1
rna-seq
1
transcript-model
1
MultipleSequenceAlignment
1
GraphAndNetwork
1
NetworkInference
1
Phylogenetics
1
MassSpectrometry
1
Metabolomics
1
Pathways
1
HiC
1
Normalization
1
Bayesian
1
RIPSeq
1
Microbiome
1
Regression
1