Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
bioconductor.org "dna-methylation" keyword
Top 5.6% on bioconductor.org
3 versions - Latest release: 13 days ago - 4 dependent packages - 50.3 thousand downloads total - 48 stars on GitHub - 1 maintainer
sesame 1.22.0
SEnsible Step-wise Analysis of DNA MEthylation BeadChips3 versions - Latest release: 13 days ago - 4 dependent packages - 50.3 thousand downloads total - 48 stars on GitHub - 1 maintainer
deconvR 1.8.0
Simulation and Deconvolution of Omic Profiles3 versions - Latest release: 6 months ago - 3.22 thousand downloads total - 9 stars on GitHub - 1 maintainer
methrix 1.16.0
Fast and efficient summarization of generic bedGraph files from Bisufite sequencing3 versions - Latest release: 6 months ago - 1 dependent package - 6.26 thousand downloads total - 27 stars on GitHub - 1 maintainer
TDbasedUFE 1.2.0
Tensor Decomposition Based Unsupervised Feature Extraction3 versions - Latest release: 6 months ago - 1 dependent package - 1.75 thousand downloads total - 5 stars on GitHub - 1 maintainer
ramr 1.10.0
Detection of Rare Aberrantly Methylated Regions in Array and NGS Data3 versions - Latest release: 6 months ago - 3.04 thousand downloads total - 0 stars on GitHub - 1 maintainer
epialleleR 1.12.0
Fast, Epiallele-Aware Methylation Caller and Reporter3 versions - Latest release: 20 days ago - 2.98 thousand downloads total - 3 stars on GitHub - 1 maintainer
BEclear 2.18.0
Correction of batch effects in DNA methylation data2 versions - Latest release: 7 months ago - 14.8 thousand downloads total - 3 stars on GitHub - 1 maintainer
methylSig 1.14.0
MethylSig: Differential Methylation Testing for WGBS and RRBS Data2 versions - Latest release: 6 months ago - 5.02 thousand downloads total - 15 stars on GitHub - 1 maintainer
Related Keywords
Software
8
DNAMethylation
7
MethylationArray
3
bioinformatics
3
MethylSeq
3
Epigenetics
3
next-generation-sequencing
2
bioconductor
2
bioconductor-package
2
DifferentialMethylation
2
StatisticalMethod
2
SingleCell
2
Regression
2
GeneExpression
2
Preprocessing
2
aberrant-methylation
1
epimutation
1
methylation-microarrays
1
epiallele
1
samtools
1
BatchEffect
1
batch-effects
1
latent-factor-model
1
methylation
1
missing-data
1
missing-values
1
rpackage
1
stochastic-gradient-descent
1
differential-methylation
1
tensor-decomposition
1
multiomics
1
histone-modifications
1
gene-expression-profiles
1
FeatureExtraction
1
bedgraph
1
Sequencing
1
Coverage
1
regression
1
omics
1
deconvolution
1
Transcriptomics
1
RNASeq
1
microarray
1
QualityControl
1