Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
bioconductor.org "rna-seq-analysis" keyword
factR 1.4.0
Functional Annotation of Custom Transcriptomes3 versions - Latest release: 6 months ago - 1.8 thousand downloads total - 1 stars on GitHub - 1 maintainer
bambu 3.4.1
Context-Aware Transcript Quantification from Long Read RNA-Seq data4 versions - Latest release: about 1 month ago - 1 dependent package - 13 thousand downloads total - 118 stars on GitHub - 1 maintainer
raer 1.2.0
RNA editing tools in R3 versions - Latest release: 11 days ago - 823 downloads total - 6 stars on GitHub - 1 maintainer
Top 5.4% on bioconductor.org
3 versions - Latest release: 23 days ago - 2 dependent packages - 49.4 thousand downloads total - 52 stars on GitHub - 1 maintainer
pcaExplorer 2.30.0
Interactive Visualization of RNA-seq Data Using a Principal Components Approach3 versions - Latest release: 23 days ago - 2 dependent packages - 49.4 thousand downloads total - 52 stars on GitHub - 1 maintainer
GeneTonic 2.8.0
Enjoy Analyzing And Integrating The Results From Differential Expression Analysis And Functional ...3 versions - Latest release: 23 days ago - 1 dependent package - 10 thousand downloads total - 75 stars on GitHub - 1 maintainer
ideal 1.28.0
Interactive Differential Expression AnaLysis3 versions - Latest release: 23 days ago - 14.5 thousand downloads total - 29 stars on GitHub - 1 maintainer
vidger 1.22.0
Create rapid visualizations of RNAseq data in R2 versions - Latest release: 6 months ago - 11.4 thousand downloads total - 17 stars on GitHub - 1 maintainer
dasper 1.9.0 removed
Detecting abberant splicing events from RNA-sequencing data1 version - Latest release: 8 months ago - 1 dependent package - 2.76 thousand downloads total - 14 stars on GitHub - 1 maintainer
Related Keywords
Software
8
RNASeq
6
r
5
bioconductor
4
Sequencing
4
ImmunoOncology
4
DifferentialExpression
4
GeneExpression
4
Visualization
4
Transcriptomics
3
GUI
3
ReportWriting
3
ShinyApps
3
reproducible-research
3
Coverage
3
shiny
3
user-friendly
3
rna-seq-data
2
QualityControl
2
transcriptome
2
bioconductor-package
2
Annotation
2
GeneSetEnrichment
2
transcriptomics
2
gene-expression
2
rna-seq
2
differential-expression
2
Alignment
2
FeatureExtraction
2
AlternativeSplicing
2
Transcription
2
MultipleComparison
2
gtf
1
functional-annotation
1
custom-transcriptomes
1
GO
1
GenePrediction
1
Pathways
1
data-exploration
1
data-visualization
1
functional-enrichment-analysis
1
FunctionalPrediction
1
gui
1
pathway-analysis
1
data-munging
1
visualization
1
diagnostics
1
rare-disease
1
splicing
1
nanopore-sequencing
1
nanopore
1
long-reads
1
transcript-quantification
1
transcript-reconstruction
1
bambu
1
Epitranscriptomics
1
SingleCell
1
Regression
1
single-cell-analysis
1
single-cell-rna-seq
1
DimensionReduction
1
Normalization
1
PrincipalComponent
1
LongRead
1
GenomeAssembly
1
GenomeAnnotation
1
principal-components
1