Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

bioconductor.org "snp" keyword

Top 3.6% on bioconductor.org
SeqArray 1.44.0
Data Management of Large-Scale Whole-Genome Sequence Variant Calls
7 versions - Latest release: 7 days ago - 11 dependent packages - 86.6 thousand downloads total - 42 stars on GitHub - 1 maintainer
Top 3.2% on bioconductor.org
SNPRelate 1.38.0
Parallel Computing Toolset for Relatedness and Principal Component Analysis of SNP Data
4 versions - Latest release: 12 days ago - 11 dependent packages - 175 thousand downloads total - 96 stars on GitHub - 1 maintainer
HIBAG 1.40.0
HLA Genotype Imputation with Attribute Bagging
5 versions - Latest release: 15 days ago - 20.1 thousand downloads total - 26 stars on GitHub - 1 maintainer
RIVER 1.26.0
R package for RIVER (RNA-Informed Variant Effect on Regulation)
2 versions - Latest release: 6 months ago - 8.53 thousand downloads total - 10 stars on GitHub - 1 maintainer
Related Keywords
Genetics 4 Software 4 bioinformatics 3 r 3 Infrastructure 2 gds-format 2 StatisticalMethod 2 functionalgenomics 1 functional-variants 1 clustering 1 biomedicalinformatics 1 bayesian 1 Transcriptomics 1 TranscriptomeVariant 1 Transcription 1 SystemsBiology 1 SNP 1 Regression 1 functionalprediction 1 generegulation 1 genetics 1 geneticvariability 1 genomicvariation 1 systemsbiology 1 transcription 1 transcriptomevariant 1 transcriptomics 1 variant 1 DataRepresentation 1 Sequencing 1 snv 1 wes 1 wgs 1 PrincipalComponent 1 pca 1 simd 1 gpu 1 hla 1 imputation 1 mhc 1 Bayesian 1 BiomedicalInformatics 1 Clustering 1 FunctionalGenomics 1 FunctionalPrediction 1 GeneExpression 1 GeneRegulation 1 GeneticVariability 1 GenomicVariation 1