bioconductor.org maintainers: Hervé Pagès
View the packages maintained by Hervé Pagès on the bioconductor.org package registry, including their contributions and dependencies.
Top 0.2% on bioconductor.org
15 versions - Latest release: about 2 months ago - 342 dependent packages - 8.57 million downloads total - 1 maintainer
GenomeInfoDb 1.44.0
Utilities for manipulating chromosome names, including modifying them to follow a particular nami...15 versions - Latest release: about 2 months ago - 342 dependent packages - 8.57 million downloads total - 1 maintainer
Top 0.6% on bioconductor.org
7 versions - Latest release: about 2 months ago - 132 dependent packages - 4.11 million downloads total - 1 maintainer
GenomicAlignments 1.44.0
Representation and manipulation of short genomic alignments7 versions - Latest release: about 2 months ago - 132 dependent packages - 4.11 million downloads total - 1 maintainer
Top 0.8% on bioconductor.org
7 versions - Latest release: about 1 month ago - 129 dependent packages - 2.35 million downloads total - 1 maintainer
BSgenome 1.76.0
Software infrastructure for efficient representation of full genomes and their SNPs7 versions - Latest release: about 1 month ago - 129 dependent packages - 2.35 million downloads total - 1 maintainer
Top 0.1% on bioconductor.org
8 versions - Latest release: about 2 months ago - 740 dependent packages - 8.79 million downloads total - 1 maintainer
S4Vectors 0.46.0
Foundation of vector-like and list-like containers in Bioconductor8 versions - Latest release: about 2 months ago - 740 dependent packages - 8.79 million downloads total - 1 maintainer
Top 0.5% on bioconductor.org
8 versions - Latest release: about 2 months ago - 183 dependent packages - 3.73 million downloads total - 1 maintainer
GenomicFeatures 1.60.0
Query the gene models of a given organism/assembly8 versions - Latest release: about 2 months ago - 183 dependent packages - 3.73 million downloads total - 1 maintainer
Top 0.9% on bioconductor.org
5 versions - Latest release: about 1 month ago - 36 dependent packages - 7.23 million downloads total - 1 maintainer
XVector 0.48.0
Foundation of external vector representation and manipulation in Bioconductor5 versions - Latest release: about 1 month ago - 36 dependent packages - 7.23 million downloads total - 1 maintainer
Top 1.4% on bioconductor.org
7 versions - Latest release: about 1 month ago - 54 dependent packages - 1.32 million downloads total - 1 maintainer
HDF5Array 1.36.0
HDF5 datasets as array-like objects in R7 versions - Latest release: about 1 month ago - 54 dependent packages - 1.32 million downloads total - 1 maintainer
Top 0.1% on bioconductor.org
5 versions - Latest release: about 1 month ago - 729 dependent packages - 9.64 million downloads total - 1 maintainer
BiocGenerics 0.54.0
S4 generic functions used in Bioconductor5 versions - Latest release: about 1 month ago - 729 dependent packages - 9.64 million downloads total - 1 maintainer
Top 0.1% on bioconductor.org
8 versions - Latest release: about 1 month ago - 604 dependent packages - 7.44 million downloads total - 1 maintainer
GenomicRanges 1.60.0
Representation and manipulation of genomic intervals8 versions - Latest release: about 1 month ago - 604 dependent packages - 7.44 million downloads total - 1 maintainer
Top 0.2% on bioconductor.org
6 versions - Latest release: about 1 month ago - 632 dependent packages - 5.99 million downloads total - 1 maintainer
SummarizedExperiment 1.38.1
A container (S4 class) for matrix-like assays6 versions - Latest release: about 1 month ago - 632 dependent packages - 5.99 million downloads total - 1 maintainer
Top 0.1% on bioconductor.org
7 versions - Latest release: about 2 months ago - 563 dependent packages - 9.35 million downloads total - 1 maintainer
IRanges 2.42.0
Foundation of integer range manipulation in Bioconductor7 versions - Latest release: about 2 months ago - 563 dependent packages - 9.35 million downloads total - 1 maintainer
Top 0.2% on bioconductor.org
10 versions - Latest release: about 2 months ago - 333 dependent packages - 7.46 million downloads total - 1 maintainer
Biostrings 2.76.0
Efficient manipulation of biological strings10 versions - Latest release: about 2 months ago - 333 dependent packages - 7.46 million downloads total - 1 maintainer
Top 0.5% on bioconductor.org
7 versions - Latest release: about 1 month ago - 111 dependent packages - 6.08 million downloads total - 1 maintainer
DelayedArray 0.34.1
A unified framework for working transparently with on-disk and in-memory array-like datasets7 versions - Latest release: about 1 month ago - 111 dependent packages - 6.08 million downloads total - 1 maintainer
SparseArray 1.8.0
High-performance sparse data representation and manipulation in R10 versions - Latest release: about 1 month ago - 5 dependent packages - 1.57 million downloads total - 1 maintainer
Top 8.6% on bioconductor.org
5 versions - Latest release: about 1 month ago - 32.9 thousand downloads total - 1 maintainer
SplicingGraphs 1.48.0
Create, manipulate, visualize splicing graphs, and assign RNA-seq reads to them5 versions - Latest release: about 1 month ago - 32.9 thousand downloads total - 1 maintainer
pwalign 1.4.0
Perform pairwise sequence alignments3 versions - Latest release: about 1 month ago - 9 dependent packages - 124 thousand downloads total - 1 maintainer
txdbmaker 1.4.1
Tools for making TxDb objects from genomic annotations6 versions - Latest release: 6 days ago - 8 dependent packages - 80.4 thousand downloads total - 1 maintainer
Top 3.1% on bioconductor.org
6 versions - Latest release: about 1 month ago - 5 dependent packages - 3.02 million downloads total - 1 maintainer
Rhtslib 3.4.0
HTSlib high-throughput sequencing library as an R package6 versions - Latest release: about 1 month ago - 5 dependent packages - 3.02 million downloads total - 1 maintainer
h5mread 1.0.0
A fast HDF5 reader1 version - Latest release: about 2 months ago - 14.4 thousand downloads total - 1 maintainer
UCSC.utils 1.4.0
Low-level utilities to retrieve data from the UCSC Genome Browser3 versions - Latest release: 16 days ago - 2 dependent packages - 810 thousand downloads total - 1 maintainer
Top 4.3% on bioconductor.org
6 versions - Latest release: 26 days ago - 4 dependent packages - 1.76 million downloads total - 1 maintainer
S4Arrays 1.8.0
Foundation of array-like containers in Bioconductor6 versions - Latest release: 26 days ago - 4 dependent packages - 1.76 million downloads total - 1 maintainer
updateObject 1.12.0
Find/fix old serialized S4 instances5 versions - Latest release: 28 days ago - 4.09 thousand downloads total - 1 maintainer
BSgenomeForge 1.8.0
Forge your own BSgenome data package8 versions - Latest release: 29 days ago - 1 dependent package - 12.4 thousand downloads total - 1 maintainer