Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

bioconductor.org maintainers: Bioconductor Package Maintainer

Top 0.4% on bioconductor.org
Rsamtools 2.20.0
Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import
3 versions - Latest release: 14 days ago - 212 dependent packages - 3.91 million downloads total - 1 maintainer
Top 1.4% on bioconductor.org
RBGL 1.80.0
An interface to the BOOST graph library
3 versions - Latest release: 14 days ago - 33 dependent packages - 1.48 million downloads total - 1 maintainer
Top 0.9% on bioconductor.org
zlibbioc 1.50.0
An R packaged zlib-1.2.5
4 versions - Latest release: 14 days ago - 29 dependent packages - 6.46 million downloads total - 1 maintainer
Top 1.3% on bioconductor.org
ShortRead 1.62.0
FASTQ input and manipulation
3 versions - Latest release: 14 days ago - 36 dependent packages - 1.63 million downloads total - 1 maintainer
Top 1.2% on bioconductor.org
KEGGREST 1.44.0
Client-side REST access to the Kyoto Encyclopedia of Genes and Genomes (KEGG)
3 versions - Latest release: 14 days ago - 35 dependent packages - 2.41 million downloads total - 1 maintainer
Top 0.1% on bioconductor.org
Biobase 2.64.0
Biobase: Base functions for Bioconductor
3 versions - Latest release: 14 days ago - 518 dependent packages - 7.89 million downloads total - 1 maintainer
Top 0.9% on bioconductor.org
VariantAnnotation 1.50.0
Annotation of Genetic Variants
4 versions - Latest release: 14 days ago - 93 dependent packages - 1.54 million downloads total - 1 maintainer
Top 1.4% on bioconductor.org
GSEABase 1.66.0
Gene set enrichment data structures and methods
3 versions - Latest release: 14 days ago - 49 dependent packages - 976 thousand downloads total - 1 maintainer
Top 0.7% on bioconductor.org
genefilter 1.86.0
genefilter: methods for filtering genes from high-throughput experiments
3 versions - Latest release: 14 days ago - 66 dependent packages - 3.31 million downloads total - 1 maintainer
Top 0.7% on bioconductor.org
graph 1.82.0
graph: A package to handle graph data structures
3 versions - Latest release: 14 days ago - 101 dependent packages - 2.56 million downloads total - 1 maintainer
Top 0.3% on bioconductor.org
AnnotationDbi 1.66.0
Manipulation of SQLite-based annotations in Bioconductor
3 versions - Latest release: 15 days ago - 255 dependent packages - 6.01 million downloads total - 1 maintainer
Top 0.9% on bioconductor.org
annotate 1.82.0
Annotation for microarrays
3 versions - Latest release: 15 days ago - 48 dependent packages - 3.6 million downloads total - 1 maintainer
Top 6.2% on bioconductor.org
ExperimentHub 2.10.0
Client to access ExperimentHub resources
2 versions - Latest release: 6 months ago - 61 dependent packages - 427 thousand downloads total - 6 stars on GitHub - 1 maintainer
Top 3.8% on bioconductor.org
BiocStyle 2.32.0
Standard styles for vignettes and other Bioconductor documents
3 versions - Latest release: 16 days ago - 1,298 dependent packages - 736 thousand downloads total - 12 stars on GitHub - 1 maintainer
Top 4.3% on bioconductor.org
AnnotationHub 3.10.1
Client to access AnnotationHub resources
3 versions - Latest release: 22 days ago - 97 dependent packages - 966 thousand downloads total - 13 stars on GitHub - 1 maintainer
Top 3.6% on bioconductor.org
Icens 1.76.0
NPMLE for Censored and Truncated Data
3 versions - Latest release: 8 days ago - 1 dependent package - 123 thousand downloads total - 1 maintainer
Top 5.3% on bioconductor.org
bioDist 1.76.0
Different distance measures
3 versions - Latest release: 8 days ago - 2 dependent packages - 88.6 thousand downloads total - 1 maintainer
Top 4.6% on bioconductor.org
chipseq 1.54.0
chipseq: A package for analyzing chipseq data
3 versions - Latest release: 8 days ago - 4 dependent packages - 115 thousand downloads total - 1 maintainer
Top 3.3% on bioconductor.org
GenomicFiles 1.40.0
Distributed computing by file or by range
3 versions - Latest release: 8 days ago - 12 dependent packages - 154 thousand downloads total - 1 maintainer
Top 5.9% on bioconductor.org
hypergraph 1.76.0
A package providing hypergraph data structures
3 versions - Latest release: 9 days ago - 3 dependent packages - 50 thousand downloads total - 1 maintainer
Top 8.6% on bioconductor.org
AnnotationFilter 1.28.0
Facilities for Filtering Bioconductor Annotation Resources
3 versions - Latest release: 16 days ago - 19 dependent packages - 815 thousand downloads total - 4 stars on GitHub - 1 maintainer
Top 2.3% on bioconductor.org
GOstats 2.68.0
Tools for manipulating GO and microarrays
2 versions - Latest release: 7 months ago - 23 dependent packages - 501 thousand downloads total - 1 maintainer
Top 3.5% on bioconductor.org
biocViews 1.70.0
Categorized views of R package repositories
2 versions - Latest release: 6 months ago - 8 dependent packages - 428 thousand downloads total - 1 maintainer
Top 4.7% on bioconductor.org
interactiveDisplayBase 1.40.0
Base package for enabling powerful shiny web displays of Bioconductor objects
2 versions - Latest release: 7 months ago - 3 dependent packages - 793 thousand downloads total - 1 maintainer
Top 2.6% on bioconductor.org
Category 2.68.0
Category Analysis
2 versions - Latest release: 6 months ago - 13 dependent packages - 513 thousand downloads total - 1 maintainer
Top 3.8% on bioconductor.org
OrganismDbi 1.44.0
Software to enable the smooth interfacing of different database packages
2 versions - Latest release: 7 months ago - 6 dependent packages - 428 thousand downloads total - 1 maintainer
Top 6.7% on bioconductor.org
BiocVersion 3.18.1
Set the appropriate version of Bioconductor packages
3 versions - Latest release: 6 months ago - 1 dependent package - 6.05 million downloads total - 1 maintainer
Top 2.2% on bioconductor.org
geneplotter 1.80.0
Graphics related functions for Bioconductor
2 versions - Latest release: 7 months ago - 9 dependent packages - 2.29 million downloads total - 1 maintainer
Top 8.2% on bioconductor.org
DynDoc 1.80.0
Dynamic document tools
2 versions - Latest release: 7 months ago - 1 dependent package - 390 thousand downloads total - 1 maintainer
Top 4.0% on bioconductor.org
AnnotationForge 1.44.0
Tools for building SQLite-based annotation data packages
2 versions - Latest release: 6 months ago - 5 dependent packages - 479 thousand downloads total - 1 maintainer
ExperimentHubData 1.28.0
Add resources to ExperimentHub
2 versions - Latest release: 6 months ago - 3 dependent packages - 26.5 thousand downloads total - 1 maintainer
Top 9.0% on bioconductor.org
CoCiteStats 1.74.0
Different test statistics based on co-citation.
2 versions - Latest release: 6 months ago - 32.9 thousand downloads total - 1 maintainer
AnnotationHubData 1.32.1
Transform public data resources into Bioconductor Data Structures
3 versions - Latest release: 3 months ago - 4 dependent packages - 34.5 thousand downloads total - 1 maintainer
Top 8.1% on bioconductor.org
ensemblVEP 1.44.0
R Interface to Ensembl Variant Effect Predictor
2 versions - Latest release: 6 months ago - 2 dependent packages - 34.8 thousand downloads total - 1 maintainer
Top 6.3% on bioconductor.org
gpls 1.74.0
Classification using generalized partial least squares
2 versions - Latest release: 6 months ago - 1 dependent package - 51.4 thousand downloads total - 1 maintainer
Top 6.5% on bioconductor.org
GeneMeta 1.74.0
MetaAnalysis for High Throughput Experiments
2 versions - Latest release: 6 months ago - 2 dependent packages - 39 thousand downloads total - 1 maintainer
Top 6.5% on bioconductor.org
interactiveDisplay 1.40.0
Package for enabling powerful shiny web displays of Bioconductor objects
2 versions - Latest release: 6 months ago - 1 dependent package - 39.2 thousand downloads total - 1 maintainer
LoomExperiment 1.20.0
LoomExperiment container
2 versions - Latest release: 6 months ago - 2 dependent packages - 27.1 thousand downloads total - 1 maintainer