Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

bioconductor.org maintainers: Michael Love

nullranges 1.8.0
Generation of null ranges via bootstrapping or covariate matching
3 versions - Latest release: 6 months ago - 1 dependent package - 4.44 thousand downloads total - 22 stars on GitHub - 1 maintainer
Top 0.5% on bioconductor.org
DESeq2 1.44.0
Differential gene expression analysis based on the negative binomial distribution
4 versions - Latest release: 20 days ago - 146 dependent packages - 2.77 million downloads total - 328 stars on GitHub - 1 maintainer
Top 6.0% on bioconductor.org
tximeta 1.22.1
Transcript Quantification Import with Automatic Metadata
7 versions - Latest release: 7 days ago - 3 dependent packages - 93 thousand downloads total - 64 stars on GitHub - 1 maintainer
Top 4.3% on bioconductor.org
plyranges 1.24.0
A fluent interface for manipulating GenomicRanges
3 versions - Latest release: 12 days ago - 22 dependent packages - 74.9 thousand downloads total - 127 stars on GitHub - 1 maintainer
Top 5.4% on bioconductor.org
exomeCopy 1.48.0 removed
Copy number variant detection from exome sequencing read depth
2 versions - Latest release: 6 months ago - 3 dependent packages - 52.2 thousand downloads total - 1 maintainer
fishpond 2.10.0
Fishpond: downstream methods and tools for expression data
3 versions - Latest release: 13 days ago - 1 dependent package - 27.1 thousand downloads total - 21 stars on GitHub - 1 maintainer
Top 2.3% on bioconductor.org
tximport 1.30.0
Import and summarize transcript-level estimates for transcript- and gene-level analysis
2 versions - Latest release: 6 months ago - 13 dependent packages - 354 thousand downloads total - 130 stars on GitHub - 1 maintainer