Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

bioconductor.org maintainers: Mikhail Dozmorov

TADCompare 1.12.1
TADCompare: Identification and characterization of differential TADs
4 versions - Latest release: 2 months ago - 5.22 thousand downloads total - 19 stars on GitHub - 1 maintainer
SpectralTAD 1.18.0
SpectralTAD: Hierarchical TAD detection using spectral clustering
2 versions - Latest release: 6 months ago - 1 dependent package - 6.76 thousand downloads total - 6 stars on GitHub - 1 maintainer
preciseTAD 1.12.0
preciseTAD: A machine learning framework for precise TAD boundary prediction
2 versions - Latest release: 6 months ago - 3.45 thousand downloads total - 6 stars on GitHub - 1 maintainer
HiCcompare 1.24.0
HiCcompare: Joint normalization and comparative analysis of multiple Hi-C datasets
2 versions - Latest release: 6 months ago - 3 dependent packages - 19.3 thousand downloads total - 15 stars on GitHub - 1 maintainer
multiHiCcompare 1.20.0
Normalize and detect differences between Hi-C datasets when replicates of each experimental condi...
2 versions - Latest release: 6 months ago - 2 dependent packages - 9.46 thousand downloads total - 4 stars on GitHub - 1 maintainer