Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

bioconductor.org maintainers: Vince Carey

Top 2.0% on bioconductor.org
ROC 1.80.0
utilities for ROC, with microarray focus
3 versions - Latest release: 11 days ago - 6 dependent packages - 247 thousand downloads total - 1 maintainer
BiocHail 1.4.0
basilisk and hail
3 versions - Latest release: 7 days ago - 942 downloads total - 6 stars on GitHub - 1 maintainer
BiocFHIR 1.6.0
Illustration of FHIR ingestion and transformation using R
3 versions - Latest release: 8 days ago - 1.55 thousand downloads total - 3 stars on GitHub - 1 maintainer
Top 3.8% on bioconductor.org
MLInterfaces 1.84.0
Uniform interfaces to R machine learning procedures for data in Bioconductor containers
3 versions - Latest release: 8 days ago - 2 dependent packages - 96.7 thousand downloads total - 1 maintainer
Top 5.2% on bioconductor.org
gwascat 2.36.0
representing and modeling data in the EMBL-EBI GWAS catalog
3 versions - Latest release: 8 days ago - 7 dependent packages - 64.9 thousand downloads total - 1 maintainer
Rcollectl 1.4.0
Help use collectl with R in Linux, to measure resource consumption in R processes
3 versions - Latest release: 9 days ago - 819 downloads total - 3 stars on GitHub - 1 maintainer
scviR 1.2.0
experimental inferface from R to scvi-tools
2 versions - Latest release: 6 months ago - 1.01 thousand downloads total - 6 stars on GitHub - 1 maintainer
ontoProc 1.24.0
processing of ontologies of anatomy, cell lines, and so on
2 versions - Latest release: 7 months ago - 3 dependent packages - 13.2 thousand downloads total - 2 stars on GitHub - 1 maintainer
ssrch 1.18.0
a simple search engine
2 versions - Latest release: 6 months ago - 1 dependent package - 5.32 thousand downloads total - 1 maintainer
tenXplore 1.24.0
ontological exploration of scRNA-seq of 1.3 million mouse neurons from 10x genomics
2 versions - Latest release: 6 months ago - 8.11 thousand downloads total - 1 maintainer
HumanTranscriptomeCompendium 1.17.0
Tools to work with a Compendium of 181000 human transcriptome sequencing studies
2 versions - Latest release: 6 months ago - 5.32 thousand downloads total - 1 maintainer
Top 7.8% on bioconductor.org
keggorthology 2.54.0
graph support for KO, KEGG Orthology
2 versions - Latest release: 6 months ago - 1 dependent package - 38.5 thousand downloads total - 1 maintainer
ldblock 1.32.0
data structures for linkage disequilibrium measures in populations
2 versions - Latest release: 6 months ago - 16.7 thousand downloads total - 1 maintainer
rhdf5client 1.24.0
Access HDF5 content from HDF Scalable Data Service
2 versions - Latest release: 6 months ago - 4 dependent packages - 11 thousand downloads total - 1 maintainer
BiocSklearn 1.24.0
interface to python sklearn via Rstudio reticulate
2 versions - Latest release: 6 months ago - 15.5 thousand downloads total - 1 maintainer
vtpnet 0.42.0
variant-transcription factor-phenotype networks
2 versions - Latest release: 6 months ago - 17 thousand downloads total - 1 maintainer
Top 8.0% on bioconductor.org
pathRender 1.70.0
Render molecular pathways
2 versions - Latest release: 6 months ago - 29.5 thousand downloads total - 1 maintainer
arrayMvout 1.60.0
multivariate outlier detection for expression array QA
2 versions - Latest release: 6 months ago - 33 thousand downloads total - 1 maintainer
hmdbQuery 1.22.0
utilities for exploration of human metabolome database
2 versions - Latest release: 6 months ago - 8.6 thousand downloads total - 1 maintainer
erma 1.18.0
epigenomic road map adventures
2 versions - Latest release: 6 months ago - 22.9 thousand downloads total - 1 maintainer
BiocOncoTK 1.22.2
Bioconductor components for general cancer genomics
3 versions - Latest release: 28 days ago - 9.46 thousand downloads total - 1 maintainer
Top 6.6% on bioconductor.org
RbcBook1 1.70.0
Support for Springer monograph on Bioconductor
2 versions - Latest release: 6 months ago - 35.8 thousand downloads total - 1 maintainer
parglms 1.34.0
support for parallelized estimation of GLMs/GEEs
2 versions - Latest release: 6 months ago - 11.4 thousand downloads total - 1 maintainer
AnVILBilling 1.12.0
Provide functions to retrieve and report on usage expenses in NHGRI AnVIL (anvilproject.org).
2 versions - Latest release: 6 months ago - 3.26 thousand downloads total - 0 stars on GitHub - 1 maintainer
affyContam 1.60.0
structured corruption of affymetrix cel file data
2 versions - Latest release: 6 months ago - 1 dependent package - 36.3 thousand downloads total - 1 maintainer
pogos 1.22.0
PharmacOGenomics Ontology Support
2 versions - Latest release: 6 months ago - 1 dependent package - 7.14 thousand downloads total - 1 maintainer
TFutils 1.22.0
TFutils
2 versions - Latest release: 6 months ago - 7.09 thousand downloads total - 1 maintainer
ivygapSE 1.24.0
A SummarizedExperiment for Ivy-GAP data
2 versions - Latest release: 6 months ago - 7.35 thousand downloads total - 1 maintainer
Top 6.5% on bioconductor.org
parody 1.60.0
Parametric And Resistant Outlier DYtection
2 versions - Latest release: 6 months ago - 1 dependent package - 37.8 thousand downloads total - 1 maintainer