Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

Top 9.9% on bioconductor.org
Top 1.7% downloads on bioconductor.org
Top 4.3% dependent packages on bioconductor.org

bioconductor.org : affyio

Tools for parsing Affymetrix data files

Registry - Source - Documentation - JSON
purl: pkg:bioconductor/affyio
Keywords: DataImport, Infrastructure, Microarray, Software
License: libpng-2.0
Latest release: 7 months ago
First release: 8 months ago
Dependent packages: 12
Downloads: 1,530,330 total
Stars: 3 on GitHub
Forks: 2 on GitHub
See more repository details: repos.ecosyste.ms
Last synced: 9 days ago

Top 5.3% on bioconductor.org
puma 3.46.0
Propagating Uncertainty in Microarray Analysis(including Affymetrix tranditional 3' arrays and ex...
3 versions - Latest release: 26 days ago - 1 dependent package - 46.1 thousand downloads total - 1 maintainer
Top 4.1% on bioconductor.org
makecdfenv 1.80.0
CDF Environment Maker
3 versions - Latest release: 26 days ago - 1 dependent package - 75.9 thousand downloads total - 1 maintainer
Top 3.2% on bioconductor.org
oligo 1.68.0
Preprocessing tools for oligonucleotide arrays
3 versions - Latest release: 27 days ago - 11 dependent packages - 368 thousand downloads total - 1 maintainer
Top 4.8% on bioconductor.org
affylmGUI 1.78.0
GUI for limma Package with Affymetrix Microarrays
3 versions - Latest release: 27 days ago - 66 thousand downloads total - 1 maintainer
Top 4.3% on bioconductor.org
crlmm 1.62.0
Genotype Calling (CRLMM) and Copy Number Analysis tool for Affymetrix SNP 5.0 and 6.0 and Illumin...
3 versions - Latest release: 27 days ago - 3 dependent packages - 69.9 thousand downloads total - 3 maintainers
Top 1.8% on bioconductor.org
oligoClasses 1.66.0
Classes for high-throughput arrays supported by oligo and crlmm
3 versions - Latest release: 30 days ago - 12 dependent packages - 355 thousand downloads total - 1 maintainer
Top 0.9% on bioconductor.org
affy 1.82.0
Methods for Affymetrix Oligonucleotide Arrays
3 versions - Latest release: about 1 month ago - 74 dependent packages - 1.86 million downloads total - 1 maintainer
Top 7.0% on bioconductor.org
SCAN.UPC 2.44.0
Single-channel array normalization (SCAN) and Universal exPression Codes (UPC)
3 versions - Latest release: 7 months ago - 35.2 thousand downloads total - 1 maintainer
BufferedMatrixMethods 1.66.0
Microarray Data related methods that utlize BufferedMatrix objects
3 versions - Latest release: 7 months ago - 31.4 thousand downloads total - 1 maintainer
ExiMiR 2.44.0
R functions for the normalization of Exiqon miRNA array data
3 versions - Latest release: 7 months ago - 24.8 thousand downloads total - 1 maintainer
Top 8.4% on bioconductor.org
sscore 1.74.0 removed
S-Score Algorithm for Affymetrix Oligonucleotide Microarrays
2 versions - Latest release: 7 months ago - 27.3 thousand downloads total - 1 maintainer
Top 2.9% on bioconductor.org
gcrma 2.74.0
Background Adjustment Using Sequence Information
3 versions - Latest release: 7 months ago - 9 dependent packages - 618 thousand downloads total - 1 maintainer