Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
conda-forge.org "napari-plugin" keyword
napari-sc3d-viewer 0.1.0
A plugin to visualise 3D spatial single cell omics1 version - Latest release: over 1 year ago - 14 stars on GitHub
napari-matplotlib 0.2.1 💰
Linking napari layers with Matplotlib plots1 version - Latest release: almost 2 years ago - 2 dependent packages - 29 stars on GitHub
napari-itk-io 0.2.0
File IO with itk for napari.2 versions - Latest release: about 2 years ago - 1 dependent package - 5 stars on GitHub
itk-napari-conversion 0.3.1
Convert between itk and napari data structures.1 version - Latest release: about 2 years ago - 2 dependent packages - 3 stars on GitHub
napari-plugin-search 0.1.3
1 version - Latest release: about 2 years ago - 1 dependent package - 0 stars on GitHubnapari-yapic-prediction 0.2.0
Image segmentation prediction tool that uses trained YAPiC model and performs image segmentation ...2 versions - Latest release: about 2 years ago - 0 stars on GitHub
world2data 0.0.3
A napari plugin in order to convert the world information to the data of a 2D/3D layer1 version - Latest release: about 2 years ago - 0 stars on GitHub
napari-animated-gif-io 0.1.2
Open and save 3D image stacks as animated gifs in napari2 versions - Latest release: almost 2 years ago - 1 stars on GitHub
napari-layer-details-display 0.1.4
3 versions - Latest release: almost 2 years ago - 1 dependent package - 1 stars on GitHubnapari-accelerated-pixel-and-object-classification 0.10.2
GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classificati...14 versions - Latest release: over 1 year ago - 1 dependent package - 37 stars on GitHub
napari-omero 0.1.1
Browse your OMERO database from within napari.1 version - Latest release: about 2 years ago - 26 stars on GitHub
napari-tabu 0.1.5
1 version - Latest release: over 2 years ago - 1 dependent package - 0 stars on GitHubnapari-script-editor 0.2.9
A python script editor plugin for napari3 versions - Latest release: over 1 year ago - 9 stars on GitHub
napari-kics 0.0.3rc6
A plugin to estimate chromosome sizes from karyotype images.1 version - Latest release: almost 2 years ago - 5 stars on GitHub
napari-brightness-contrast 0.1.8
3 versions - Latest release: over 1 year ago - 1 dependent package - 10 stars on GitHubnapari-workflow-inspector 0.2.2
Inspect relationships between napari-plugins in active workflows.4 versions - Latest release: almost 2 years ago - 1 dependent package - 8 stars on GitHub
napari-spatialdata 0.1.0
Interactive visualization of spatial omics data1 version - Latest release: over 1 year ago - 21 stars on GitHub
grabber-ift 0.2.2
Grabber: A Tool to Improve Convergence in Interactive Image Segmentation1 version - Latest release: over 2 years ago - 14 stars on GitHub
napari-allencell-segmenter 2.1.3
A plugin that enables image segmentation provided by Allen Institute for Cell Science3 versions - Latest release: over 1 year ago - 16 stars on GitHub
napari-folder-browser 0.1.3
1 version - Latest release: about 2 years ago - 1 dependent package - 4 stars on GitHubnapari-curtain 0.1.1
1 version - Latest release: about 2 years ago - 1 dependent package - 4 stars on GitHubstardist-napari 2022.7.5
StarDist plugin for napari2 versions - Latest release: almost 2 years ago - 22 stars on GitHub
napari-mat-images 0.1.3
A plugin for napari to load images from Matlab's .mat files1 version - Latest release: about 2 years ago - 1 stars on GitHub
napari-segment-blobs-and-things-with-membranes 0.3.3
A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy im...12 versions - Latest release: over 1 year ago - 1 dependent package - 17 stars on GitHub
napari-j 0.2.4
Connect Napari with FIJI/ImageJ3 versions - Latest release: over 1 year ago - 3 stars on GitHub
napari-trait2d 0.1.4
A napari plugin for TRAIT2D, a software for quantitative analysis of single particle diffusion data2 versions - Latest release: over 1 year ago - 0 stars on GitHub
napari-text-layer 0.1.2
Text layer for bio-image annotation.1 version - Latest release: over 2 years ago - 6 stars on GitHub
napari-labels-overlap 0.0.3
napari-labels-overlap plugin2 versions - Latest release: almost 2 years ago - 1 stars on GitHub
cellfinder-napari 0.0.20
Efficient cell detection in large images using cellfinder (https://brainglobe.info/cellfinder) in...3 versions - Latest release: over 1 year ago - 16 stars on GitHub
napari_video 0.2.9
Napari plugin for working with video files.3 versions - Latest release: over 1 year ago - 7 stars on GitHub
napari-dvid 0.2.0
DVID loader for napari1 version - Latest release: about 2 years ago - 0 stars on GitHub
napari-cupy-image-processing 0.3.1
7 versions - Latest release: over 1 year ago - 16 stars on GitHubbrainglobe-napari-io 0.1.5
Read and write files from the BrainGlobe neuroanatomy suite2 versions - Latest release: about 2 years ago - 2 dependent packages - 4 stars on GitHub
napari-hdf5-labels-io 0.3.dev16
Napari plugin to store Napari projects in a .h5 file. Label layer are stored in a sparse represen...1 version - Latest release: about 2 years ago - 1 stars on GitHub
napari-vesicles-segmentation 0.0.1
A simple plugin to detect vesicles in cells images.1 version - Latest release: over 1 year ago - 4 stars on GitHub
napari-pyclesperanto-assistant 0.21.0
GPU-accelerated general purpose image processing and image analysis in napari9 versions - Latest release: over 1 year ago - 2 dependent packages - 26 stars on GitHub
napari-deepmeta 1.2
Segment mouse lungs and metastasis on MRI images.1 version - Latest release: about 2 years ago - 2 stars on GitHub
napari-labelimg4classification 0.1.1
A simple image-level annotation tool supporting multi-channel images for napari.1 version - Latest release: over 2 years ago - 4 stars on GitHub
napari-plot-profile 0.2.2
2 versions - Latest release: over 1 year ago - 1 dependent package - 13 stars on GitHubnapari-ome-zarr 0.5.2
A napari plugin for zarr backed OME-NGFF images5 versions - Latest release: almost 2 years ago - 2 dependent packages - 1 dependent repositories - 13 stars on GitHub
devbio-napari 0.8.0
16 versions - Latest release: over 1 year ago - 18 stars on GitHubnapari-time-slicer 0.4.9
A meta plugin for processing timelapse data timepoint by timepoint in napari8 versions - Latest release: almost 2 years ago - 8 dependent packages - 2 stars on GitHub
napari-clusters-plotter 0.5.2
A napari plugin for clustering objects according to their properties.6 versions - Latest release: over 1 year ago - 2 dependent packages - 60 stars on GitHub
napari-skimage-regionprops 0.5.6
Feature extraction for labeled objects in images using regionprops from scikit-image16 versions - Latest release: over 1 year ago - 11 dependent packages - 30 stars on GitHub
label-creator 0.0.9
A napari plugin for generation of Label-Layers according to selected image data shapes1 version - Latest release: about 2 years ago - 0 stars on GitHub
partial-aligner 0.0.1
Partial-Aligner is a napari plugin used for manual registration and histology slide repair1 version - Latest release: over 2 years ago - 1 stars on GitHub
offset-subtraction 0.0.5
A napari plugin in oder to subtract an intensity offset such as autofluorescence1 version - Latest release: about 2 years ago - 0 stars on GitHub
napari-labelling-assistant 0.0.5
A lightweight plugin for visualizing labelling statistics.1 version - Latest release: over 2 years ago - 0 stars on GitHub
napari-medical-image-formats 0.3.8
A napari plugin in order to read and write medical image formats such as DICOM, DICOM Series and ...1 version - Latest release: about 2 years ago - 5 stars on GitHub
layer-data-replace 0.0.5
A napari plugin in order to replace parts of the data of a layer by another one1 version - Latest release: about 2 years ago - 0 stars on GitHub
image-composer 0.0.19
A napari plugin in order to compose a background image with a foreground image1 version - Latest release: about 2 years ago - 0 stars on GitHub
napari-yolov5 0.2.13
2 versions - Latest release: over 1 year ago - 4 stars on GitHubnapari-3d-ortho-viewer 0.0.1
Napari 3D Ortho Viewer - an ortho viewer for napari for 3D images1 version - Latest release: about 2 years ago - 1 dependent package - 6 stars on GitHub
napari-elementary-numpy-operations 0.0.5
A napari plugin covers elementary numpy operations like swap axes, flip, sqeeze an array or rotat...1 version - Latest release: about 2 years ago - 1 stars on GitHub
napari-simpleitk-image-processing 0.4.4
11 versions - Latest release: over 1 year ago - 2 dependent packages - 13 stars on GitHubnapari-tracks-reader 0.1.3
napari reader plugin for tracking1 version - Latest release: about 2 years ago - 6 stars on GitHub
napari-mouse-controls 0.1.3
Control zoom, slicing and contrast windowing with mouse and touch screen1 version - Latest release: about 2 years ago - 1 dependent package - 1 stars on GitHub
napari-nd-cropper 0.1.3
A napari plugin in order to crop nd-images via different modes1 version - Latest release: about 2 years ago - 0 stars on GitHub
napari-stracking 0.1.9
Napari plugin for particles tracking1 version - Latest release: over 1 year ago - 5 stars on GitHub
napari-crop 0.1.6
2 versions - Latest release: almost 2 years ago - 1 dependent package - 5 stars on GitHubimage-part-selecter 0.0.7
A napari plugin in order to select parts of images1 version - Latest release: about 2 years ago - 0 stars on GitHub
napari-workflow-optimizer 0.1.4
Optimize image processing workflows in napari2 versions - Latest release: about 2 years ago - 1 dependent package - 17 stars on GitHub
Related Keywords
napari
15
python
8
image-segmentation
3
object-detection
3
tensorflow
2
plotting
2
itk
2
medical-imaging
2
open-source
2
scientific-computing
2
image-processing
2
cookiecutter-napari-plugin
1
pyopencl
1
clesperanto
1
vesicles
1
segmentation
1
microscopy
1
cell-biology
1
yapic
1
video
1
opencv
1
resnet
1
keras
1
deeplearning
1
lungs-segmentation
1
mri-images
1
ngff
1
zarr
1
clustering
1
skimage
1
histology
1
image-registration
1
image-restoration
1
assistive-technology
1
labelling
1
python-3
1
3d
1
spatial-transcriptomics
1
matplotlib
1
hacktoberfest
1
io
1
omero
1
chromosomes
1
size-estimation
1
spatial-analysis
1
spatial-omics
1
visualization
1
grabber
1
image-foresting-transform
1
livewire
1
napari-allencell-segmenter
1
cell-segmentation
1
deep-learning
1
nuclei-segmentation
1
bioimage-analysis
1
fiji
1
image-analysis
1
imagej
1
python3
1
single-particle-tracking
1
cell-detection
1
cellfinder
1