Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
cran.r-project.org "gene-expression" keyword
glmmSeq 0.5.5
General Linear Mixed Models for Gene-Level Differential Expression6 versions - Latest release: over 1 year ago - 18 stars on GitHub - 1 maintainer
volcano3D 2.0.9
3D Volcano Plots and Polar Plots for Three-Class Data7 versions - Latest release: almost 1 year ago - 259 downloads last month - 31 stars on GitHub - 1 maintainer
graphsim 1.0.3
Simulate Expression Data from 'igraph' Networks5 versions - Latest release: over 1 year ago - 1 dependent package - 2 dependent repositories - 494 downloads last month - 21 stars on GitHub - 1 maintainer
myTAI 0.9.3
Evolutionary Transcriptomics15 versions - Latest release: about 3 years ago - 1 dependent repositories - 350 downloads last month - 35 stars on GitHub - 1 maintainer
scINSIGHT 0.1.4
Interpretation of Heterogeneous Single-Cell Gene Expression Data5 versions - Latest release: almost 2 years ago - 164 downloads last month - 19 stars on GitHub - 1 maintainer
grex 1.9
Gene ID Mapping for Genotype-Tissue Expression (GTEx) Data8 versions - Latest release: almost 5 years ago - 1 dependent repositories - 254 downloads last month - 8 stars on GitHub - 1 maintainer
countToFPKM 1.0
Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)1 version - Latest release: about 5 years ago - 267 downloads last month - 56 stars on GitHub - 1 maintainer
survival.svb 0.0-2
Fit High-Dimensional Proportional Hazards Models2 versions - Latest release: over 2 years ago - 160 downloads last month - 4 stars on GitHub - 1 maintainer
NCutYX 0.1.0
Clustering of Omics Data of Multiple Types with a Multilayer Network Representation1 version - Latest release: over 6 years ago - 129 downloads last month - 4 stars on GitHub - 1 maintainer
MixRF 1.0
A Random-Forest-Based Approach for Imputing Clustered Incomplete Data1 version - Latest release: about 8 years ago - 141 downloads last month - 34 stars on GitHub - 1 maintainer
Related Keywords
bioinformatics
4
graph-algorithms
2
rna-seq
2
package
2
r
2
transcriptomics
2
mixed-models
2
cran
2
studies-transcriptomes
1
transcriptome
1
integration
1
mytai
1
scrna-seq
1
gene-sets
1
genotype-tissue-expression
1
gtex
1
normalization
1
bayes
1
proportional-hazards
1
survival-analysis
1
variational-inference
1
c-plus-plus
1
cancer-genomics
1
clustering
1
copy-number-variation
1
devtools
1
graph-cut
1
graphs
1
proteins
1
rcpp
1
imputation
1
random-forest
1
differential-gene-expression
1
glmm
1
differential-expression
1
differential-expression-analysis
1
interactive
1
omics
1
plotly
1
volcanoplots
1
benchmarking
1
gene-regulatory-networks
1
genetics
1
genomic-data-analysis
1
genomics
1
igraph-networks
1
joss
1
ngs-analysis
1
r-stats
1
simulated-data
1
simulation-modeling
1
biological-processes
1
conservation
1
evo-devo
1
evolution
1
evolutionary-transcriptomics
1
expression-profiles
1