Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
cran.r-project.org "phylogenetics" keyword
phylopath 1.2.1
Perform Phylogenetic Path Analysis15 versions - Latest release: about 2 months ago - 1 dependent package - 507 downloads last month - 11 stars on GitHub - 1 maintainer
beautier 2.6.12
'BEAUti' from R15 versions - Latest release: about 1 month ago - 6 dependent packages - 10 dependent repositories - 670 downloads last month - 13 stars on GitHub - 1 maintainer
phylobase 0.8.12 💰
Base Package for Phylogenetic Structures and Comparative Data16 versions - Latest release: 3 months ago - 18 dependent packages - 51 dependent repositories - 4.58 thousand downloads last month - 17 stars on GitHub - 1 maintainer
Top 5.3% on cran.r-project.org
58 versions - Latest release: over 1 year ago - 64 dependent packages - 162 dependent repositories - 14.8 thousand downloads last month - 197 stars on GitHub - 1 maintainer
phangorn 2.11.1
Phylogenetic Reconstruction and Analysis58 versions - Latest release: over 1 year ago - 64 dependent packages - 162 dependent repositories - 14.8 thousand downloads last month - 197 stars on GitHub - 1 maintainer
sensiPhy 0.8.5
Sensitivity Analysis for Comparative Methods9 versions - Latest release: about 4 years ago - 220 downloads last month - 11 stars on GitHub - 1 maintainer
phylosamp 1.0.1
Sample Size Calculations for Molecular and Phylogenetic Studies2 versions - Latest release: 12 months ago - 229 downloads last month - 12 stars on GitHub - 1 maintainer
datelife 0.6.8
Scientific Data on Time of Lineage Divergence for Your Taxa6 versions - Latest release: 11 months ago - 3 dependent repositories - 11 stars on GitHub - 1 maintainer
paleobuddy 1.0.0
Simulating Diversification Dynamics1 version - Latest release: over 2 years ago - 192 downloads last month - 5 stars on GitHub - 1 maintainer
ontoFAST 1.0.0
Interactive Annotation of Characters with Biological Ontologies1 version - Latest release: about 3 years ago - 136 downloads last month - 1 stars on GitHub - 1 maintainer
scistreer 1.2.0
Maximum-Likelihood Perfect Phylogeny Inference at Scale4 versions - Latest release: 11 months ago - 1 dependent package - 319 downloads last month - 5 stars on GitHub - 1 maintainer
harrietr 0.2.3
Wrangle Phylogenetic Distance Matrices and Other Utilities2 versions - Latest release: over 6 years ago - 1 dependent repositories - 12 stars on GitHub - 1 maintainer
Rogue 2.1.6
Identify Rogue Taxa in Sets of Phylogenetic Trees9 versions - Latest release: 5 months ago - 2 dependent packages - 3 dependent repositories - 489 downloads last month - 2 stars on GitHub - 1 maintainer
nLTT 1.4.9
Calculate the NLTT Statistic13 versions - Latest release: 9 months ago - 4 dependent packages - 12 dependent repositories - 302 downloads last month - 6 stars on GitHub - 1 maintainer
TBRDist 1.0.2
Rearrangement Distances Between Unrooted Phylogenetic Trees3 versions - Latest release: over 3 years ago - 1 dependent repositories - 161 downloads last month - 0 stars on GitHub - 1 maintainer
rrnni 0.1.1
Manipulate with RNNI Tree Space2 versions - Latest release: 8 months ago - 170 downloads last month - 1 stars on GitHub - 1 maintainer
bumblebee 0.1.0
Quantify Disease Transmission Within and Between Population Groups1 version - Latest release: almost 3 years ago - 173 downloads last month - 0 stars on GitHub - 1 maintainer
phylter 0.9.11
Detect and Remove Outliers in Phylogenomics Datasets3 versions - Latest release: 9 months ago - 162 downloads last month - 8 stars on GitHub - 1 maintainer
RNeXML 2.4.11
Semantically Rich I/O for the 'NeXML' Format28 versions - Latest release: over 1 year ago - 2 dependent packages - 7 dependent repositories - 3.61 thousand downloads last month - 12 stars on GitHub - 1 maintainer
DAISIEprep 0.4.0
Extracts Phylogenetic Island Community Data from Phylogenetic Trees2 versions - Latest release: about 1 month ago - 1 dependent repositories - 310 downloads last month - 6 stars on GitHub - 1 maintainer
Quartet 1.2.6
Comparison of Phylogenetic Trees Using Quartet and Split Measures10 versions - Latest release: 3 months ago - 3 dependent packages - 5 dependent repositories - 8 stars on GitHub - 1 maintainer
TreeTools 1.10.0
Create, Modify and Analyse Phylogenetic Trees26 versions - Latest release: 9 months ago - 7 dependent packages - 13 dependent repositories - 1.04 thousand downloads last month - 15 stars on GitHub - 1 maintainer
shinyTempSignal 0.0.8
Explore Temporal and Other Phylogenetic Signals7 versions - Latest release: 2 months ago - 364 downloads last month - 6 stars on GitHub - 1 maintainer
TreeSearch 1.5.0
Phylogenetic Analysis with Discrete Character Data24 versions - Latest release: about 1 month ago - 3 dependent packages - 4 dependent repositories - 525 downloads last month - 5 stars on GitHub - 1 maintainer
rncl 0.8.7 💰
An Interface to the Nexus Class Library9 versions - Latest release: over 1 year ago - 2 dependent packages - 5 dependent repositories - 6.79 thousand downloads last month - 8 stars on GitHub - 1 maintainer
aphylo 0.3-3 removed
Statistical Inference and Prediction of Annotations in Phylogenetic Trees4 versions - Latest release: 8 months ago - 278 downloads last month - 6 stars on GitHub - 1 maintainer
Related Keywords
r
16
r-package
7
phylogenetic-trees
6
evolution
5
cran
4
rstats
3
bioinformatics
3
package
3
comparative-methods
2
research-tool
2
annotations
2
comparison
1
island-biogeography
1
data-science
1
nexml
1
phylogenomics
1
transmission
1
heterogeneity
1
genetics
1
epidemiology
1
r-stats
1
quartet
1
quartet-distance
1
tree
1
evolutionary-biology
1
molecular-clock
1
shiny-app
1
morphological-analysis
1
tree-search
1
newick
1
nexus
1
tree-parsing
1
inference
1
rcpparmadillo
1
analysis
1
path
1
bayesian
1
beast
1
beast2
1
beauti
1
phylogenetic-inference
1
phylogenetic-analysis
1
ecology
1
sensitivity-analysis
1
sampling
1
dating-software
1
reproducible-research
1
macroevolution
1
paleobiology
1
paleontology
1
character-matrices
1
characters
1
ontology
1
single-cell
1
consensus-tree
1
nltt
1
nltt-statistic
1
distance-calculation
1