Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
cran.r-project.org "scrna-seq" keyword
conos 1.5.2
Clustering on Network of Samples13 versions - Latest release: 3 months ago - 2 dependent packages - 8 dependent repositories - 643 downloads last month - 188 stars on GitHub - 1 maintainer
scCustomize 2.1.2
Custom Visualizations & Functions for Streamlined Analyses of Single Cell Sequencing9 versions - Latest release: 3 months ago - 2.84 thousand downloads last month - 163 stars on GitHub - 1 maintainer
clustermole 1.1.1
Unbiased Single-Cell Transcriptomic Data Cell Type Identification4 versions - Latest release: 5 months ago - 1 dependent repositories - 562 downloads last month - 10 stars on GitHub - 1 maintainer
iCellR 1.6.7
Analyzing High-Throughput Single Cell Sequencing Data24 versions - Latest release: 4 months ago - 643 downloads last month - 116 stars on GitHub - 1 maintainer
DIscBIO 1.2.2
A User-Friendly Pipeline for Biomarker Discovery in Single-Cell Transcriptomics6 versions - Latest release: 7 months ago - 10 stars on GitHub - 1 maintainer
pagoda2 1.0.12
Single Cell Analysis and Differential Expression13 versions - Latest release: 3 months ago - 3 dependent packages - 12 dependent repositories - 817 downloads last month - 187 stars on GitHub - 1 maintainer
APackOfTheClones 1.2.0
Visualization of Clonal Expansion for Single Cell Immune Profiles5 versions - Latest release: about 1 month ago - 520 downloads last month - 13 stars on GitHub - 1 maintainer
scINSIGHT 0.1.4
Interpretation of Heterogeneous Single-Cell Gene Expression Data5 versions - Latest release: almost 2 years ago - 164 downloads last month - 19 stars on GitHub - 1 maintainer
CACIMAR 1.0.0
Cross-Species Analysis of Cell Identities, Markers and Regulations1 version - Latest release: about 2 years ago - 183 downloads last month - 5 stars on GitHub - 1 maintainer
scperturbR 0.1.0
E-Statistics for Seurat Objects1 version - Latest release: about 1 year ago - 147 downloads last month - 83 stars on GitHub - 1 maintainer
Related Keywords
single-cell
5
single-cell-rna-seq
3
cite-seq
2
r
2
seurat
2
single-cell-genomics
2
cell-type-classification
2
transcriptomics
2
scrnaseq
1
immune-system
1
immune-repertoire
1
clonal-analysis
1
single-cell-analysis
1
r-package
1
jupyter-notebook
1
biomarker-discovery
1
umap
1
bioinformatics
1
gene-expression
1
integration
1
cross-species
1
database
1
perturbation
1
python
1
scatac-seq
1
science
1
statistics
1
batch-correction
1
customization
1
ggplot2
1
visualization
1
cell-type
1
cell-type-matching
1
gene-expression-signatures
1
10xgenomics
1
3d
1
batch-normalization
1
clustering
1
clustering-algorithm
1
diffusion-maps
1
dropout
1
icellr
1
imputation
1
intractive-graph
1
normalization
1
pseudotime
1
scvdj-seq
1
singel-cell-sequencing
1