Matrix dependent packages | cran.r-project.org

Top 3.2% on cran.r-project.org

lme4 1.1-35.3

Linear Mixed-Effects Models using 'Eigen' and S4
130 versions - Latest release: about 2 months ago - 500 dependent packages - 1,383 dependent repositories - 471 thousand downloads last month - 607 stars on GitHub - 1 maintainer

SmCCNet 2.0.3

Sparse Multiple Canonical Correlation Network Analysis Tool
5 versions - Latest release: about 2 months ago - 1 dependent repositories - 377 downloads last month - 19 stars on GitHub - 1 maintainer

spmodel 0.6.0

Spatial Statistical Modeling and Prediction
8 versions - Latest release: about 2 months ago - 1 dependent package - 1 dependent repositories - 679 downloads last month - 12 stars on GitHub - 1 maintainer

Top 7.4% on cran.r-project.org

mlt 1.5-1

Most Likely Transformations
38 versions - Latest release: about 2 months ago - 10 dependent packages - 4 dependent repositories - 2.91 thousand downloads last month - 1 maintainer

norMmix 0.1-1

Direct MLE for Multivariate Normal Mixture Distributions
1 version - Latest release: about 2 months ago - 282 downloads last month - 1 maintainer

GPCERF 0.2.4

Gaussian Processes for Estimating Causal Exposure Response Curves
6 versions - Latest release: about 2 months ago - 369 downloads last month - 9 stars on GitHub - 1 maintainer

Top 4.6% on cran.r-project.org

ggeffects 1.5.2

Create Tidy Data Frames of Marginal Effects for 'ggplot' from Model Outputs
51 versions - Latest release: about 2 months ago - 11 dependent packages - 20 dependent repositories - 34.6 thousand downloads last month - 501 stars on GitHub - 1 maintainer

blavaan 0.5-4

Bayesian Latent Variable Analysis
36 versions - Latest release: about 2 months ago - 8 dependent packages - 22 dependent repositories - 4.82 thousand downloads last month - 77 stars on GitHub - 1 maintainer

Qval 0.1.6

The Q-Matrix Validation Methods Framework
3 versions - Latest release: about 2 months ago - 318 downloads last month - 1 maintainer

SDPDmod 0.0.5

Spatial Dynamic Panel Data Modeling
5 versions - Latest release: about 2 months ago - 485 downloads last month - 4 stars on GitHub - 1 maintainer

DIFM 1.0

Dynamic ICAR Spatiotemporal Factor Models
1 version - Latest release: 2 months ago - 278 downloads last month - 1 maintainer

konfound 0.5.1

Quantify the Robustness of Causal Inferences
9 versions - Latest release: 2 months ago - 971 downloads last month - 14 stars on GitHub - 1 maintainer

MendelianRandomization 0.10.0

Mendelian Randomization Package
15 versions - Latest release: 2 months ago - 1 dependent package - 8 dependent repositories - 8.25 thousand downloads last month - 1 maintainer

gpboost 1.4.0

Combining Tree-Boosting with Gaussian Process and Mixed Effects Models
37 versions - Latest release: 2 months ago - 717 downloads last month - 498 stars on GitHub - 1 maintainer

quanteda.textmodels 0.9.7

Scaling Models and Classifiers for Textual Data
9 versions - Latest release: 2 months ago - 9 dependent packages - 14 dependent repositories - 2.76 thousand downloads last month - 41 stars on GitHub - 1 maintainer

text2map 0.2.0

R Tools for Text Matrices, Embeddings, and Networks
10 versions - Latest release: 2 months ago - 433 downloads last month - 4 stars on GitLab.com - 1 maintainer

seededlda 1.2.1

Seeded Sequential LDA for Topic Modeling
15 versions - Latest release: 2 months ago - 2 dependent packages - 3 dependent repositories - 1.3 thousand downloads last month - 64 stars on GitHub - 1 maintainer

Top 9.4% on cran.r-project.org

umx 4.20.0

Structural Equation Modeling and Twin Modeling in R
40 versions - Latest release: 2 months ago - 2 dependent packages - 6 dependent repositories - 2.11 thousand downloads last month - 43 stars on GitHub - 1 maintainer

sparseCov 0.0.1

Sparse Covariance Estimation Based on Thresholding
1 version - Latest release: 2 months ago - 250 downloads last month - 0 stars on GitHub - 1 maintainer

Top 1.3% on cran.r-project.org

tidytext 0.4.2

Text Mining using 'dplyr', 'ggplot2', and Other Tidy Tools
14 versions - Latest release: 2 months ago - 66 dependent packages - 194 dependent repositories - 44.9 thousand downloads last month - 1,158 stars on GitHub - 1 maintainer

pedgene 3.9

Gene-Level Variant Association Tests for Pedigree Data
13 versions - Latest release: 2 months ago - 1 dependent package - 1 dependent repositories - 343 downloads last month - 1 maintainer

lpcde 0.1.4

Boundary Adaptive Local Polynomial Conditional Density Estimator
6 versions - Latest release: 2 months ago - 1 dependent package - 333 downloads last month - 1 maintainer

BOSO 1.0.4

Bilevel Optimization Selector Operator
2 versions - Latest release: 2 months ago - 300 downloads last month - 2 stars on GitHub - 1 maintainer

makemyprior 1.2.1

Intuitive Construction of Joint Priors for Variance Parameters
5 versions - Latest release: 2 months ago - 324 downloads last month - 1 maintainer

semfindr 0.1.8

Influential Cases in Structural Equation Modeling
5 versions - Latest release: 2 months ago - 209 downloads last month - 1 stars on GitHub - 1 maintainer

glmmrBase 0.8.1

Generalised Linear Mixed Models in R
18 versions - Latest release: 2 months ago - 1 dependent package - 2 dependent repositories - 432 downloads last month - 3 stars on GitHub - 1 maintainer

rTwig 1.0.2

Realistic Quantitative Structure Models
1 version - Latest release: 2 months ago - 208 downloads last month - 2 stars on GitHub - 1 maintainer

galamm 0.2.0

Generalized Additive Latent and Mixed Models
3 versions - Latest release: 2 months ago - 212 downloads last month - 22 stars on GitHub - 1 maintainer

ILSM 1.0.2

Analyze Inter-Layer Structure of Multilayer Ecological Network
2 versions - Latest release: 2 months ago - 145 downloads last month - 1 maintainer

proxyC 0.4.1

Computes Proximity in Large Sparse Matrices
17 versions - Latest release: 2 months ago - 7 dependent packages - 17 dependent repositories - 6.38 thousand downloads last month - 28 stars on GitHub - 1 maintainer

RealVAMS 0.4-6

Multivariate VAM Fitting
9 versions - Latest release: 2 months ago - 212 downloads last month - 1 maintainer

MonteCarloSEM 0.0.8

Monte Carlo Data Simulation Package
8 versions - Latest release: 2 months ago - 255 downloads last month - 1 maintainer

psychonetrics 0.11.6

Structural Equation Modeling and Confirmatory Network Analysis
18 versions - Latest release: 2 months ago - 1 dependent repositories - 786 downloads last month - 1 maintainer

GPvam 3.1-0

Maximum Likelihood Estimation of Multiple Membership Mixed Models Used in Value-Added Modeling
13 versions - Latest release: 2 months ago - 310 downloads last month - 1 maintainer

hySAINT 1.2.1

Hybrid Genetic and Simulated Annealing Algorithm for High Dimensional Linear Models with Interact...
2 versions - Latest release: 2 months ago - 136 downloads last month - 1 maintainer

brainGraph 3.1.0

Graph Theory Analysis of Brain MRI Data
12 versions - Latest release: 2 months ago - 1 dependent package - 2 dependent repositories - 600 downloads last month - 153 stars on GitHub - 1 maintainer

Top 8.9% on cran.r-project.org

Signac 1.13.0

Analysis of Single-Cell Chromatin Data
18 versions - Latest release: 2 months ago - 1 dependent package - 17 dependent repositories - 6.89 thousand downloads last month - 295 stars on GitHub - 1 maintainer

rliger 2.0.1

Linked Inference of Genomic Experimental Relationships
5 versions - Latest release: 2 months ago - 1 dependent package - 13 dependent repositories - 1.43 thousand downloads last month - 360 stars on GitHub - 1 maintainer

Top 5.4% on cran.r-project.org

TMB 1.9.11

Template Model Builder: A General Random Effect Tool Inspired by 'ADMB'
39 versions - Latest release: 2 months ago - 38 dependent packages - 180 dependent repositories - 33 thousand downloads last month - 164 stars on GitHub - 1 maintainer

RNewsflow 1.2.8

Tools for Comparing Text Messages Across Time and Media
11 versions - Latest release: 2 months ago - 1 dependent package - 2 dependent repositories - 757 downloads last month - 1 maintainer

cgaim 1.0.1

Constrained Groupwise Additive Index Models
2 versions - Latest release: 2 months ago - 193 downloads last month - 1 maintainer

sdmTMB 0.5.0

Spatial and Spatiotemporal SPDE-Based GLMMs with 'TMB'
8 versions - Latest release: 2 months ago - 1 dependent package - 2 dependent repositories - 2.12 thousand downloads last month - 174 stars on GitHub - 1 maintainer

Top 9.5% on cran.r-project.org

FRK 2.2.3

Fixed Rank Kriging
27 versions - Latest release: 2 months ago - 1 dependent package - 5 dependent repositories - 756 downloads last month - 60 stars on GitHub - 1 maintainer

RaceID 0.3.5

Identification of Cell Types, Inference of Lineage Trees, and Prediction of Noise Dynamics from S...
27 versions - Latest release: 2 months ago - 1 dependent repositories - 483 downloads last month - 1 maintainer

scDHA 1.2.2

Single-Cell Decomposition using Hierarchical Autoencoder
6 versions - Latest release: 2 months ago - 1 dependent package - 312 downloads last month - 35 stars on GitHub - 1 maintainer

dsem 1.2.1

Fit Dynamic Structural Equation Models
6 versions - Latest release: 2 months ago - 336 downloads last month - 3 stars on GitHub - 1 maintainer

Top 7.5% on cran.r-project.org

arm 1.14-4

Data Analysis Using Regression and Multilevel/Hierarchical Models
120 versions - Latest release: 2 months ago - 55 dependent packages - 125 dependent repositories - 40.2 thousand downloads last month - 1 maintainer

MicrobiomeStat 1.2

Statistical Methods for Microbiome Compositional Data
3 versions - Latest release: 2 months ago - 1 dependent package - 1 dependent repositories - 1.28 thousand downloads last month - 1 maintainer

Top 9.5% on cran.r-project.org

nonlinearTseries 0.3.0

Nonlinear Time Series Analysis
15 versions - Latest release: 2 months ago - 7 dependent packages - 5 dependent repositories - 1.56 thousand downloads last month - 33 stars on GitHub - 1 maintainer

Top 6.8% on cran.r-project.org

plm 2.6-4

Linear Models for Panel Data
47 versions - Latest release: 2 months ago - 64 dependent packages - 149 dependent repositories - 39.8 thousand downloads last month - 46 stars on GitHub - 1 maintainer

pencal 2.2.1

Penalized Regression Calibration (PRC) for the Dynamic Prediction of Survival
22 versions - Latest release: 2 months ago - 357 downloads last month - 1 maintainer

TestDesign 1.6.1

Optimal Test Design Approach to Fixed and Adaptive Test Construction
23 versions - Latest release: 2 months ago - 1 dependent package - 2 dependent repositories - 526 downloads last month - 2 stars on GitHub - 1 maintainer

btergm 1.10.12

Temporal Exponential Random Graph Models by Bootstrapped Pseudolikelihood
21 versions - Latest release: 2 months ago - 4 dependent packages - 25 dependent repositories - 2.72 thousand downloads last month - 16 stars on GitHub - 1 maintainer

onion 1.5-3

Octonions and Quaternions
14 versions - Latest release: 2 months ago - 8 dependent packages - 11 dependent repositories - 438 downloads last month - 6 stars on GitHub - 1 maintainer

CooRTweet 2.0.2

Coordinated Networks Detection on Social Media
5 versions - Latest release: 2 months ago - 278 downloads last month - 28 stars on GitHub - 1 maintainer

rmumps 5.2.1-29

Wrapper for MUMPS Library
36 versions - Latest release: 2 months ago - 4 dependent packages - 4 dependent repositories - 545 downloads last month - 9 stars on GitHub - 1 maintainer

rTensor2 2.0.0

MultiLinear Algebra
3 versions - Latest release: 2 months ago - 167 downloads last month - 1 maintainer

multivarious 0.2.0

Extensible Data Structures for Multivariate Analysis
1 version - Latest release: 3 months ago - 174 downloads last month - 0 stars on GitHub - 1 maintainer

Top 1.9% on cran.r-project.org

metafor 4.6-0

Meta-Analysis Package for R
34 versions - Latest release: 3 months ago - 82 dependent packages - 160 dependent repositories - 31.4 thousand downloads last month - 209 stars on GitHub - 1 maintainer

Top 1.3% on cran.r-project.org

spatstat 3.0-8

Spatial Point Pattern Analysis, Model-Fitting, Simulation, Tests
212 versions - Latest release: 3 months ago - 138 dependent packages - 233 dependent repositories - 16.5 thousand downloads last month - 1 maintainer

profoc 1.3.2

Probabilistic Forecast Combination Using CRPS Learning
18 versions - Latest release: 3 months ago - 396 downloads last month - 12 stars on GitHub - 1 maintainer

Crossover 0.1-22

Analysis and Search of Crossover Designs
13 versions - Latest release: 3 months ago - 418 downloads last month - 6 stars on GitHub - 1 maintainer

INLAjoint 24.3.25

Multivariate Joint Modeling for Longitudinal and Time-to-Event Outcomes with 'INLA'
3 versions - Latest release: 3 months ago - 256 downloads last month - 14 stars on GitHub - 1 maintainer

qtlpoly 0.2.4

Random-Effect Multiple QTL Mapping in Autopolyploids
3 versions - Latest release: 3 months ago - 250 downloads last month - 4 stars on GitHub - 1 maintainer

gMCP 0.8-17

Graph Based Multiple Comparison Procedures
47 versions - Latest release: 3 months ago - 1 dependent package - 3 dependent repositories - 750 downloads last month - 7 stars on GitHub - 1 maintainer

Top 7.5% on cran.r-project.org

spatstat.linnet 3.1-5

Linear Networks Functionality of the 'spatstat' Family
16 versions - Latest release: 3 months ago - 32 dependent packages - 36 dependent repositories - 13.6 thousand downloads last month - 1 maintainer

Top 3.0% on cran.r-project.org

sf 1.0-16

Simple Features for R
62 versions - Latest release: 3 months ago - 818 dependent packages - 2,616 dependent repositories - 661 thousand downloads last month - 1,279 stars on GitHub - 1 maintainer

stylest2 0.1

Estimating Speakers of Texts
1 version - Latest release: 3 months ago - 136 downloads last month - 1 maintainer

PFIM 6.0.3

Population Fisher Information Matrix
5 versions - Latest release: 3 months ago - 289 downloads last month - 1 maintainer

Top 1.5% on cran.r-project.org

parsnip 1.2.1

A Common API to Modeling and Analysis Functions
25 versions - Latest release: 3 months ago - 69 dependent packages - 184 dependent repositories - 36.8 thousand downloads last month - 562 stars on GitHub - 1 maintainer

Top 8.9% on cran.r-project.org

spatstat.model 3.2-11

Parametric Statistical Modelling and Inference for the 'spatstat' Family
9 versions - Latest release: 3 months ago - 21 dependent packages - 10 dependent repositories - 13.8 thousand downloads last month - 1 maintainer

GaussSuppression 0.8.3

Tabular Data Suppression using Gaussian Elimination
10 versions - Latest release: 3 months ago - 1 dependent repositories - 396 downloads last month - 2 stars on GitHub - 1 maintainer

MCARtest 1.2.1

Optimal Nonparametric Testing of Missing Completely at Random
4 versions - Latest release: 3 months ago - 262 downloads last month - 1 maintainer

Top 5.1% on cran.r-project.org

performance 0.11.0 💰

Assessment of Regression Models Performance
34 versions - Latest release: 3 months ago - 34 dependent packages - 71 dependent repositories - 65.6 thousand downloads last month - 945 stars on GitHub - 1 maintainer

abn 3.0.6

Modelling Multivariate Data with Additive Bayesian Networks
31 versions - Latest release: 3 months ago - 1 dependent package - 2 dependent repositories - 361 downloads last month - 1 stars on GitHub - 1 maintainer

Top 6.3% on cran.r-project.org

spatstat.explore 3.2-7

Exploratory Data Analysis for the 'spatstat' Family
9 versions - Latest release: 3 months ago - 41 dependent packages - 45 dependent repositories - 47.7 thousand downloads last month - 1 maintainer

spANOVA 0.99.4

Analysis of Field Trials with Geostatistics & Spatial AR Models
5 versions - Latest release: 3 months ago - 212 downloads last month - 1 maintainer

SimplyAgree 0.2.0

Flexible and Robust Agreement and Reliability Analyses
5 versions - Latest release: 3 months ago - 583 downloads last month - 1 maintainer

Top 5.8% on cran.r-project.org

survey 4.4-2

Analysis of Complex Survey Samples
110 versions - Latest release: 3 months ago - 152 dependent packages - 300 dependent repositories - 71.3 thousand downloads last month - 1 maintainer

Top 4.8% on cran.r-project.org

brms 2.21.0 💰

Bayesian Regression Models using 'Stan'
60 versions - Latest release: 3 months ago - 53 dependent packages - 186 dependent repositories - 25.1 thousand downloads last month - 1,231 stars on GitHub - 1 maintainer

Top 5.4% on cran.r-project.org

glmmTMB 1.1.9

Generalized Linear Mixed Models using Template Model Builder
20 versions - Latest release: 3 months ago - 48 dependent packages - 81 dependent repositories - 262 stars on GitHub - 1 maintainer

PRECAST 1.6.5

Embedding and Clustering with Alignment for Spatial Datasets
11 versions - Latest release: 3 months ago - 1 dependent package - 2 dependent repositories - 332 downloads last month - 8 stars on GitHub - 1 maintainer

getspanel 0.2.0

General-to-Specific Modelling of Panel Data
5 versions - Latest release: 3 months ago - 288 downloads last month - 11 stars on GitHub - 1 maintainer

DR.SC 3.4

Joint Dimension Reduction and Spatial Clustering
13 versions - Latest release: 3 months ago - 2 dependent packages - 2 dependent repositories - 423 downloads last month - 4 stars on GitHub - 1 maintainer

gadget3 0.11-1

Globally-Applicable Area Disaggregated General Ecosystem Toolbox V3
4 versions - Latest release: 3 months ago - 2 dependent repositories - 256 downloads last month - 8 stars on GitHub - 1 maintainer

netgwas 1.14.3

Network-Based Genome Wide Association Studies
18 versions - Latest release: 3 months ago - 369 downloads last month - 1 maintainer

ProFAST 1.4

Probabilistic Factor Analysis for Spatially-Aware Dimension Reduction
3 versions - Latest release: 3 months ago - 188 downloads last month - 2 stars on GitHub - 1 maintainer

GSNA 0.1.4.2 removed

Gene Set Networking Analysis Package
2 versions - Latest release: 3 months ago - 1 maintainer

Top 4.3% on cran.r-project.org

sommer 4.3.4

Solving Mixed Model Equations in R
55 versions - Latest release: 3 months ago - 10 dependent packages - 19 dependent repositories - 7 thousand downloads last month - 1 maintainer

naivebayes 1.0.0

High Performance Implementation of the Naive Bayes Algorithm
9 versions - Latest release: 3 months ago - 10 dependent packages - 13 dependent repositories - 8.05 thousand downloads last month - 36 stars on GitHub - 1 maintainer

mosaicCalc 0.6.1

R-Language Based Calculus Operations for Teaching
4 versions - Latest release: 3 months ago - 5 dependent packages - 6 dependent repositories - 1.18 thousand downloads last month - 10 stars on GitHub - 1 maintainer

saeRobust 0.5.0

Robust Small Area Estimation
5 versions - Latest release: 3 months ago - 2 dependent packages - 3 dependent repositories - 479 downloads last month - 1 stars on GitHub - 1 maintainer

rqPen 3.2.2

Penalized Quantile Regression
25 versions - Latest release: 3 months ago - 3 dependent packages - 1 dependent repositories - 1.12 thousand downloads last month - 13 stars on GitHub - 1 maintainer

PROreg 1.3

Patient Reported Outcomes Regression Analysis
4 versions - Latest release: 3 months ago - 2 dependent packages - 5 dependent repositories - 1.69 thousand downloads last month - 1 maintainer

Top 4.5% on cran.r-project.org

igraph 2.0.3

Network Analysis and Visualization
71 versions - Latest release: 3 months ago - 941 dependent packages - 3,446 dependent repositories - 638 thousand downloads last month - 1 maintainer

glmmrOptim 0.3.4

Approximate Optimal Experimental Designs Using Generalised Linear Mixed Models
9 versions - Latest release: 3 months ago - 223 downloads last month - 1 stars on GitHub - 1 maintainer

GPvecchia 0.1.7

Scalable Gaussian-Process Approximations
6 versions - Latest release: 3 months ago - 2 dependent packages - 3 dependent repositories - 489 downloads last month - 1 maintainer

landsepi 1.4.0

Landscape Epidemiology and Evolution
21 versions - Latest release: 3 months ago - 378 downloads last month - 1 maintainer