Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

Top 3.9% on cran.r-project.org
Top 0.8% downloads on cran.r-project.org
Top 0.4% dependent packages on cran.r-project.org
Top 0.4% dependent repos on cran.r-project.org
Top 2.2% forks on cran.r-project.org

cran.r-project.org : matrixStats

Functions that Apply to Rows and Columns of Matrices (and to Vectors)

Registry - Source - Documentation - JSON
purl: pkg:cran/matrixStats
Keywords: cran, matrix, package, performance, r, vector
License: Artistic-2.0
Latest release: about 1 month ago
First release: almost 15 years ago
Dependent packages: 295
Dependent repositories: 1,130
Downloads: 253,123 last month
Stars: 198 on GitHub
Forks: 33 on GitHub
Docker dependents: 873
Docker downloads: 3,030,806
Total Commits: 1567
Committers: 14
Average commits per author: 111.929
Development Distribution Score (DDS): 0.185
More commit stats: commits.ecosyste.ms
See more repository details: repos.ecosyste.ms
Last synced: 3 days ago

Top 3.6% on cran.r-project.org
Seurat 5.1.0
Tools for Single Cell Genomics
41 versions - Latest release: 8 days ago - 63 dependent packages - 433 dependent repositories - 51.7 thousand downloads last month - 2,133 stars on GitHub - 1 maintainer
Top 4.8% on cran.r-project.org
brms 2.21.0 💰
Bayesian Regression Models using 'Stan'
60 versions - Latest release: about 2 months ago - 53 dependent packages - 186 dependent repositories - 26.5 thousand downloads last month - 1,231 stars on GitHub - 1 maintainer
Top 5.7% on cran.r-project.org
collapse 2.0.13 💰
Advanced and Fast Data Transformation
43 versions - Latest release: about 1 month ago - 25 dependent packages - 38 dependent repositories - 36.2 thousand downloads last month - 601 stars on GitHub - 1 maintainer
Top 6.9% on cran.r-project.org
summarytools 1.0.1
Tools to Quickly and Neatly Summarize Data
25 versions - Latest release: almost 2 years ago - 8 dependent packages - 18 dependent repositories - 20.3 thousand downloads last month - 492 stars on GitHub - 1 maintainer
fastverse 0.3.2
A Suite of High-Performance Packages for Statistics and Data Manipulation
8 versions - Latest release: 8 months ago - 1 dependent package - 4 dependent repositories - 1.41 thousand downloads last month - 213 stars on GitHub - 1 maintainer
Top 8.8% on cran.r-project.org
recommenderlab 1.0.6
Lab for Developing and Testing Recommender Algorithms
24 versions - Latest release: 8 months ago - 6 dependent packages - 13 dependent repositories - 2.3 thousand downloads last month - 207 stars on GitHub - 1 maintainer
Top 6.2% on cran.r-project.org
sctransform 0.4.1
Variance Stabilizing Transformations for Single Cell UMI Data
11 versions - Latest release: 7 months ago - 5 dependent packages - 33 dependent repositories - 29.9 thousand downloads last month - 197 stars on GitHub - 1 maintainer
susieR 0.12.35
Sum of Single Effects Linear Regression
9 versions - Latest release: about 1 year ago - 1 dependent package - 12 dependent repositories - 1.55 thousand downloads last month - 162 stars on GitHub - 1 maintainer
numbat 1.4.0
Haplotype-Aware CNV Analysis from scRNA-Seq
8 versions - Latest release: 3 months ago - 820 downloads last month - 150 stars on GitHub - 1 maintainer
sigminer 2.3.1
Extract, Analyze and Visualize Mutational Signatures for Genomic Variations
34 versions - Latest release: 7 days ago - 1 dependent repositories - 841 downloads last month - 134 stars on GitHub - 1 maintainer
fastshap 0.1.1
Fast Approximate Shapley Values
8 versions - Latest release: 3 months ago - 6 dependent packages - 4 dependent repositories - 2.12 thousand downloads last month - 110 stars on GitHub - 1 maintainer
Top 8.4% on cran.r-project.org
expss 0.11.6 💰
Tables, Labels and Some Useful Functions from Spreadsheets and 'SPSS' Statistics
23 versions - Latest release: 10 months ago - 6 dependent packages - 7 dependent repositories - 7.44 thousand downloads last month - 80 stars on GitHub - 1 maintainer
mvgam 1.1.1 💰
Multivariate (Dynamic) Generalized Additive Models
2 versions - Latest release: 8 days ago - 199 downloads last month - 78 stars on GitHub - 1 maintainer
mgcViz 0.1.11
Visualisations for Generalized Additive Models
7 versions - Latest release: 8 months ago - 1 dependent package - 3 dependent repositories - 2.76 thousand downloads last month - 74 stars on GitHub - 1 maintainer
JMbayes2 0.4-5
Extended Joint Models for Longitudinal and Time-to-Event Data
12 versions - Latest release: 11 months ago - 2 dependent packages - 1 dependent repositories - 558 downloads last month - 67 stars on GitHub - 1 maintainer
Top 9.1% on cran.r-project.org
GLMMadaptive 0.9-1
Generalized Linear Mixed Models using Adaptive Gaussian Quadrature
17 versions - Latest release: 7 months ago - 10 dependent packages - 26 dependent repositories - 3.58 thousand downloads last month - 56 stars on GitHub - 1 maintainer
liger 2.0.1
Lightweight Iterative Geneset Enrichment
4 versions - Latest release: over 3 years ago - 4 dependent repositories - 372 downloads last month - 55 stars on GitHub - 1 maintainer
statar 0.7.6
Tools Inspired by 'Stata' to Manipulate Tabular Data
21 versions - Latest release: 9 months ago - 1 dependent package - 1 dependent repositories - 1.51 thousand downloads last month - 51 stars on GitHub - 1 maintainer
fslr 2.25.3
Wrapper Functions for 'FSL' ('FMRIB' Software Library) from Functional MRI of the Brain ('FMRIB')
15 versions - Latest release: 8 days ago - 5 dependent packages - 9 dependent repositories - 502 downloads last month - 41 stars on GitHub - 1 maintainer
strex 2.0.0
Extra String Manipulation Functions
23 versions - Latest release: 4 months ago - 9 dependent packages - 14 dependent repositories - 2.45 thousand downloads last month - 40 stars on GitHub - 1 maintainer
refund 0.1-35
Regression with Functional Data
31 versions - Latest release: 3 months ago - 16 dependent packages - 20 dependent repositories - 2.47 thousand downloads last month - 38 stars on GitHub - 1 maintainer
Top 4.9% on cran.r-project.org
dplR 1.7.6
Dendrochronology Program Library in R
70 versions - Latest release: 6 months ago - 13 dependent packages - 51 dependent repositories - 3.68 thousand downloads last month - 36 stars on GitHub - 1 maintainer
landmap 0.0.13 removed
Automated Spatial Prediction using Ensemble Machine Learning
6 versions - Latest release: over 2 years ago - 1 dependent package - 3 dependent repositories - 35 stars on GitHub
scDHA 1.2.2
Single-Cell Decomposition using Hierarchical Autoencoder
6 versions - Latest release: about 2 months ago - 1 dependent package - 312 downloads last month - 35 stars on GitHub - 1 maintainer
Top 8.0% on cran.r-project.org
matrixTests 0.2.3 💰
Fast Statistical Hypothesis Tests on Rows and Columns of Matrices
15 versions - Latest release: 8 months ago - 4 dependent packages - 14 dependent repositories - 1.55 thousand downloads last month - 34 stars on GitHub - 1 maintainer
metamicrobiomeR 1.2
Microbiome Data Analysis & Meta-Analysis with GAMLSS-BEZI & Random Effects
2 versions - Latest release: over 3 years ago - 1 dependent repositories - 165 downloads last month - 33 stars on GitHub - 1 maintainer
footBayes 0.2.0
Fitting Bayesian and MLE Football Models
2 versions - Latest release: 9 months ago - 236 downloads last month - 32 stars on GitHub - 1 maintainer
rhierbaps 1.1.4
Clustering Genetic Sequence Data Using the HierBAPS Algorithm
5 versions - Latest release: over 1 year ago - 1 dependent package - 2 dependent repositories - 268 downloads last month - 29 stars on GitHub - 1 maintainer
simPop 2.1.3
Simulation of Complex Synthetic Data Information
16 versions - Latest release: 4 months ago - 1 dependent package - 1 dependent repositories - 476 downloads last month - 28 stars on GitHub - 1 maintainer
migest 2.0.4
Methods for the Indirect Estimation of Bilateral Migration
23 versions - Latest release: 6 months ago - 1 dependent repositories - 648 downloads last month - 27 stars on GitHub - 1 maintainer
geocmeans 0.3.4
Implementing Methods for Spatial Fuzzy Unsupervised Classification
7 versions - Latest release: 8 months ago - 307 downloads last month - 26 stars on GitHub - 1 maintainer
cSEM 0.5.0
Composite-Based Structural Equation Modeling
6 versions - Latest release: over 1 year ago - 2 dependent packages - 2 dependent repositories - 964 downloads last month - 25 stars on GitHub - 1 maintainer
ltmle 0.9.3
Longitudinal Targeted Maximum Likelihood Estimation
16 versions - Latest release: over 10 years ago - 1 dependent package - 3 dependent repositories - 510 downloads last month - 23 stars on GitHub - 1 maintainer
latrend 1.6.1
A Framework for Clustering Longitudinal Data
12 versions - Latest release: 3 days ago - 515 downloads last month - 23 stars on GitHub - 1 maintainer
LDM 6.0.1
Testing Hypotheses About the Microbiome using the Linear Decomposition Model
2 versions - Latest release: 8 months ago - 180 downloads last month - 23 stars on GitHub - 1 maintainer
filesstrings 3.4.0
Handy File and String Manipulation
31 versions - Latest release: 3 months ago - 8 dependent packages - 14 dependent repositories - 1.62 thousand downloads last month - 22 stars on GitHub - 1 maintainer
COINr 1.1.7
Composite Indicator Construction and Analysis
9 versions - Latest release: 7 months ago - 1 dependent repositories - 485 downloads last month - 22 stars on GitHub - 1 maintainer
bulkAnalyseR 1.1.0
Interactive Shiny App for Bulk Sequencing Data
3 versions - Latest release: over 1 year ago - 332 downloads last month - 21 stars on GitHub - 1 maintainer
BayesfMRI 0.3.11
Spatial Bayesian Methods for Task Functional MRI Studies
2 versions - Latest release: 5 months ago - 225 downloads last month - 19 stars on GitHub - 1 maintainer
bnclassify 0.4.8
Learning Discrete Bayesian Network Classifiers from Data
14 versions - Latest release: 2 months ago - 1 dependent package - 1 dependent repositories - 595 downloads last month - 18 stars on GitHub - 1 maintainer
ggdmc 0.2.6.0
Cognitive Models
8 versions - Latest release: about 5 years ago - 1 dependent repositories - 260 downloads last month - 17 stars on GitHub - 1 maintainer
TopDom 0.10.1
An Efficient and Deterministic Method for Identifying Topological Domains in Genomes
1 version - Latest release: about 3 years ago - 3 dependent packages - 1 dependent repositories - 214 downloads last month - 17 stars on GitHub - 1 maintainer
felp 0.5.0 💰
Functional Help for Functions, Objects, and Packages
6 versions - Latest release: about 1 month ago - 443 downloads last month - 16 stars on GitHub - 1 maintainer
conquer 1.3.3
Convolution-Type Smoothed Quantile Regression
10 versions - Latest release: about 1 year ago - 3 dependent packages - 4 dependent repositories - 6.03 thousand downloads last month - 16 stars on GitHub - 1 maintainer
adjclust 0.6.9
Adjacency-Constrained Clustering of a Block-Diagonal Similarity Matrix
12 versions - Latest release: 3 months ago - 2 dependent packages - 1 dependent repositories - 542 downloads last month - 16 stars on GitHub - 1 maintainer
PlackettLuce 0.4.3
Plackett-Luce Models for Rankings
13 versions - Latest release: 11 months ago - 3 dependent packages - 5 dependent repositories - 596 downloads last month - 16 stars on GitHub - 1 maintainer
eaf 2.4.1
Plots of the Empirical Attainment Function
16 versions - Latest release: about 1 year ago - 4 dependent packages - 5 dependent repositories - 1.53 thousand downloads last month - 16 stars on GitHub - 1 maintainer
RandomForestsGLS 0.1.4
Random Forests for Dependent Data
5 versions - Latest release: about 2 years ago - 247 downloads last month - 16 stars on GitHub - 1 maintainer
haldensify 0.2.3
Highly Adaptive Lasso Conditional Density Estimation
5 versions - Latest release: over 2 years ago - 1 dependent package - 18 dependent repositories - 347 downloads last month - 15 stars on GitHub - 1 maintainer
regsem 1.9.5
Regularized Structural Equation Modeling
24 versions - Latest release: 12 months ago - 2 dependent packages - 739 downloads last month - 14 stars on GitHub - 1 maintainer
miesmuschel 0.0.4 💰
Mixed Integer Evolution Strategies
4 versions - Latest release: 3 days ago - 1 dependent package - 2 dependent repositories - 555 downloads last month - 14 stars on GitHub - 1 maintainer
decompr 6.4.0
Global Value Chain Decomposition
12 versions - Latest release: almost 2 years ago - 1 dependent package - 5 dependent repositories - 528 downloads last month - 14 stars on GitHub - 1 maintainer
cvCovEst 1.2.2
Cross-Validated Covariance Matrix Estimation
11 versions - Latest release: 3 months ago - 3 dependent packages - 346 downloads last month - 12 stars on GitHub - 1 maintainer
estudy2 0.10.0 removed
An Implementation of Parametric and Nonparametric Event Study
7 versions - Latest release: over 2 years ago - 12 stars on GitHub
CARBayesST 3.3.1
Spatio-Temporal Generalised Linear Mixed Models for Areal Unit Data
22 versions - Latest release: over 1 year ago - 1 dependent package - 4 dependent repositories - 695 downloads last month - 12 stars on GitHub - 1 maintainer
gap 1.2.2
Genetic Analysis Package
50 versions - Latest release: over 4 years ago - 5 dependent packages - 31 dependent repositories - 11.6 thousand downloads last month - 12 stars on GitHub - 1 maintainer
semtree 0.9.20
Recursive Partitioning for Structural Equation Models
12 versions - Latest release: about 1 month ago - 1 dependent repositories - 767 downloads last month - 12 stars on GitHub - 1 maintainer
templateICAr 0.6.4
Estimate Brain Networks and Connectivity with ICA and Empirical Priors
3 versions - Latest release: 4 months ago - 1 dependent package - 1 dependent repositories - 243 downloads last month - 10 stars on GitHub - 1 maintainer
DSWE 1.8.2
Data Science for Wind Energy
8 versions - Latest release: 3 months ago - 295 downloads last month - 10 stars on GitHub - 1 maintainer
aroma.affymetrix 3.2.2
Analysis of Large Affymetrix Microarray Data Sets
33 versions - Latest release: 3 months ago - 2 dependent packages - 14 dependent repositories - 837 downloads last month - 10 stars on GitHub - 1 maintainer
WeMix 4.0.3
Weighted Mixed-Effects Models Using Multilevel Pseudo Maximum Likelihood Estimation
21 versions - Latest release: 7 months ago - 1 dependent package - 1 dependent repositories - 707 downloads last month - 10 stars on GitHub - 1 maintainer
aSPU 1.50
Adaptive Sum of Powered Score Test
17 versions - Latest release: almost 3 years ago - 1 dependent package - 1 dependent repositories - 434 downloads last month - 10 stars on GitHub - 1 maintainer
penppml 0.2.3
Penalized Poisson Pseudo Maximum Likelihood Regression
6 versions - Latest release: 8 months ago - 342 downloads last month - 10 stars on GitHub - 1 maintainer
RGCCA 3.0.3
Regularized and Sparse Generalized Canonical Correlation Analysis for Multiblock Data
9 versions - Latest release: 5 months ago - 4 dependent packages - 9 dependent repositories - 552 downloads last month - 9 stars on GitHub - 1 maintainer
fastcpd 0.14.3
Fast Change Point Detection via Sequential Gradient Descent
14 versions - Latest release: 22 days ago - 621 downloads last month - 9 stars on GitHub - 1 maintainer
sensobol 1.1.5
Computation of Variance-Based Sensitivity Indices
15 versions - Latest release: 3 months ago - 423 downloads last month - 9 stars on GitHub - 1 maintainer
nn2poly 0.1.1
Neural Network Weights Transformation into Polynomial Coefficients
2 versions - Latest release: 4 months ago - 164 downloads last month - 8 stars on GitHub - 1 maintainer
surveysd 1.3.1
Survey Standard Error Estimation for Cumulated Estimates and their Differences in Complex Panel D...
5 versions - Latest release: over 1 year ago - 1 dependent package - 2 dependent repositories - 269 downloads last month - 8 stars on GitHub - 1 maintainer
conformalbayes 0.1.2
Jackknife(+) Predictive Intervals for Bayesian Models
2 versions - Latest release: almost 2 years ago - 289 downloads last month - 8 stars on GitHub - 1 maintainer
BREADR 1.0.1
Estimates Degrees of Relatedness (Up to the Second Degree) for Extreme Low-Coverage Data
2 versions - Latest release: about 1 year ago - 756 downloads last month - 8 stars on GitHub - 1 maintainer
arf 0.2.0
Adversarial Random Forests
3 versions - Latest release: 4 months ago - 370 downloads last month - 7 stars on GitHub - 1 maintainer
nestedcv 0.7.8
Nested Cross-Validation with 'glmnet' and 'caret'
14 versions - Latest release: 2 months ago - 683 downloads last month - 7 stars on GitHub - 1 maintainer
PSCBS 0.67.0
Analysis of Parent-Specific DNA Copy Numbers
34 versions - Latest release: 3 months ago - 4 dependent packages - 11 dependent repositories - 792 downloads last month - 7 stars on GitHub - 1 maintainer
ldsep 2.1.5
Linkage Disequilibrium Shrinkage Estimation for Polyploids
8 versions - Latest release: over 1 year ago - 229 downloads last month - 7 stars on GitHub - 1 maintainer
Ostats 0.2.0
O-Stats, or Pairwise Community-Level Niche Overlap Statistics
3 versions - Latest release: over 1 year ago - 732 downloads last month - 7 stars on GitHub - 1 maintainer
grandR 0.2.5
Comprehensive Analysis of Nucleotide Conversion Sequencing Data
4 versions - Latest release: 3 months ago - 319 downloads last month - 7 stars on GitHub - 1 maintainer
CNVScope 3.7.2
A Versatile Toolkit for Copy Number Variation Relationship Data Analysis and Visualization
18 versions - Latest release: about 2 years ago - 395 downloads last month - 7 stars on GitHub - 1 maintainer
stagedtrees 2.3.0
Staged Event Trees
9 versions - Latest release: 3 months ago - 224 downloads last month - 7 stars on GitHub - 1 maintainer
disbayes 1.1.0
Bayesian Multi-State Modelling of Chronic Disease Burden Data
2 versions - Latest release: 8 months ago - 231 downloads last month - 7 stars on GitHub - 1 maintainer
cophescan 1.4.0
Adaptation of the Coloc Method for PheWAS
2 versions - Latest release: 2 months ago - 260 downloads last month - 6 stars on GitHub - 1 maintainer
seagull 1.1.0 removed
Lasso, Group Lasso, and Sparse-Group Lasso for Mixed Models
5 versions - Latest release: about 3 years ago - 1 dependent package - 1 dependent repositories - 196 downloads last month - 6 stars on GitHub - 1 maintainer
DCLEAR 1.0.13
Distance Based Cell Lineage Reconstruction
5 versions - Latest release: 8 months ago - 1 dependent repositories - 225 downloads last month - 6 stars on GitHub - 1 maintainer
UBayFS 1.0
A User-Guided Bayesian Framework for Ensemble Feature Selection
1 version - Latest release: about 1 year ago - 135 downloads last month - 6 stars on GitHub - 1 maintainer
cointReg 0.2.0
Parameter Estimation and Inference in a Cointegrating Regression
2 versions - Latest release: almost 8 years ago - 2 dependent packages - 4 dependent repositories - 296 downloads last month - 5 stars on GitHub - 2 maintainers
jointseg 1.0.2
Joint Segmentation of Multivariate (Copy Number) Signals
3 versions - Latest release: over 5 years ago - 4 dependent packages - 3 dependent repositories - 427 downloads last month - 5 stars on GitHub - 1 maintainer
corrcoverage 1.2.1
Correcting the Coverage of Credible Sets from Bayesian Genetic Fine Mapping
4 versions - Latest release: over 4 years ago - 155 downloads last month - 5 stars on GitHub - 1 maintainer
greeks 1.4.2
Sensitivities of Prices of Financial Options and Implied Volatilities
19 versions - Latest release: 25 days ago - 585 downloads last month - 5 stars on GitHub - 1 maintainer
neurobase 1.32.4
'Neuroconductor' Base Package with Helper Functions for 'nifti' Objects
12 versions - Latest release: 9 days ago - 11 dependent packages - 44 dependent repositories - 704 downloads last month - 5 stars on GitHub - 1 maintainer
maic 0.1.4
Matching-Adjusted Indirect Comparison
3 versions - Latest release: about 2 years ago - 276 downloads last month - 5 stars on GitHub - 1 maintainer
liminal 0.1.2
Multivariate Data Visualization with Tours and Embeddings
1 version - Latest release: almost 3 years ago - 1 dependent package - 1 dependent repositories - 148 downloads last month - 5 stars on GitHub - 1 maintainer
Canek 0.2.5
Batch Correction of Single Cell Transcriptome Data
6 versions - Latest release: 5 months ago - 1 dependent repositories - 300 downloads last month - 4 stars on GitHub - 1 maintainer
iraceplot 1.3
Plots for Visualizing the Data Produced by the 'irace' Package
4 versions - Latest release: 3 days ago - 250 downloads last month - 4 stars on GitHub - 1 maintainer
fergm 1.1.4
Estimation and Fit Assessment of Frailty Exponential Random Graph Models
6 versions - Latest release: over 5 years ago - 477 downloads last month - 4 stars on GitHub - 1 maintainer
dynamicSDM 1.3.3
Species Distribution and Abundance Modelling at High Spatio-Temporal Resolution
7 versions - Latest release: 7 months ago - 282 downloads last month - 4 stars on GitHub - 1 maintainer
utilities 0.6.1 removed
Data Utility Functions
4 versions - Latest release: almost 2 years ago - 5 dependent repositories - 519 downloads last month - 4 stars on GitHub - 1 maintainer
RHRT 1.0.1
Heart Rate Turbulence Analysis
2 versions - Latest release: almost 3 years ago - 126 downloads last month - 4 stars on GitHub - 1 maintainer
EstimationTools 4.0.0
Maximum Likelihood Estimation for Probability Functions from Data Sets
6 versions - Latest release: over 1 year ago - 1 dependent repositories - 472 downloads last month - 4 stars on GitHub - 1 maintainer
cosinor2 0.2.1
Extended Tools for Cosinor Analysis of Rhythms
3 versions - Latest release: over 5 years ago - 4 dependent packages - 4 dependent repositories - 813 downloads last month - 4 stars on GitHub - 1 maintainer
BRISC 1.0.5
Fast Inference for Large Spatial Datasets using BRISC
8 versions - Latest release: about 2 years ago - 1 dependent package - 4 dependent repositories - 396 downloads last month - 4 stars on GitHub - 1 maintainer
pARI 1.1.1
Permutation-Based All-Resolutions Inference Method
3 versions - Latest release: over 2 years ago - 1 dependent package - 2 dependent repositories - 143 downloads last month - 4 stars on GitHub - 1 maintainer