Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

Top 6.4% on cran.r-project.org
Top 2.9% downloads on cran.r-project.org
Top 0.9% dependent packages on cran.r-project.org
Top 1.5% dependent repos on cran.r-project.org
Top 5.2% forks on cran.r-project.org

cran.r-project.org : msm

Multi-State Markov and Hidden Markov Models in Continuous Time

Registry - Source - Documentation - JSON
purl: pkg:cran/msm
License: CNRI-Python-GPL-Compatible,CNRI-Python-GPL-Compatible
Latest release: 6 months ago
First release: over 21 years ago
Dependent packages: 110
Dependent repositories: 160
Downloads: 17,270 last month
Stars: 53 on GitHub
Forks: 16 on GitHub
Docker dependents: 34
Docker downloads: 197,498
Total Commits: 130
Committers: 8
Average commits per author: 16.25
Development Distribution Score (DDS): 0.092
More commit stats: commits.ecosyste.ms
See more repository details: repos.ecosyste.ms
Last synced: about 3 hours ago

surveillance 1.23.0
Temporal and Spatio-Temporal Modeling and Monitoring of Epidemic Phenomena
52 versions - Latest release: 25 days ago - 4 dependent packages - 10 dependent repositories - 1.55 thousand downloads last month - 1 maintainer
ShinyItemAnalysis 1.5.1
Test and Item Analysis via Shiny
22 versions - Latest release: about 1 month ago - 3 dependent packages - 5 dependent repositories - 1.56 thousand downloads last month - 1 maintainer
Families 2.0.2
Kinship Ties in (Virtual) Multi-Generation Populations
4 versions - Latest release: about 2 months ago - 325 downloads last month - 6 stars on GitHub - 1 maintainer
httk 2.3.1
High-Throughput Toxicokinetics
24 versions - Latest release: 2 months ago - 1 dependent package - 1 dependent repositories - 752 downloads last month - 1 maintainer
tradepolicy 0.7.0 💰
Replication of 'An Advanced Guide To Trade Policy Analysis'
3 versions - Latest release: 2 months ago - 196 downloads last month - 4 stars on GitHub - 1 maintainer
Surrogate 3.2.5
Evaluation of Surrogate Endpoints in Clinical Trials
58 versions - Latest release: 2 months ago - 1 dependent package - 700 downloads last month - 1 stars on GitHub - 1 maintainer
VirtualPop 2.0.2
Simulation of Populations by Sampling Waiting-Time Distributions
2 versions - Latest release: 2 months ago - 1 dependent package - 204 downloads last month - 13 stars on GitHub - 1 maintainer
extrafrail 1.9
Estimation and Additional Tools for Alternative Shared Frailty Models
10 versions - Latest release: 2 months ago - 298 downloads last month - 1 maintainer
TropFishR 1.6.4
Tropical Fisheries Analysis
13 versions - Latest release: 3 months ago - 2 dependent repositories - 527 downloads last month - 22 stars on GitHub - 1 maintainer
hysteresis 2.7.2
Tools for Modeling Rate-Dependent Hysteretic Processes and Ellipses
6 versions - Latest release: 3 months ago - 275 downloads last month - 1 maintainer
Top 6.6% on cran.r-project.org
pammtools 0.5.93
Piece-Wise Exponential Additive Mixed Modeling Tools for Survival Analysis
16 versions - Latest release: 3 months ago - 6 dependent packages - 11 dependent repositories - 3.17 thousand downloads last month - 44 stars on GitHub - 1 maintainer
Top 5.5% on cran.r-project.org
TAM 4.2-21
Test Analysis Modules
60 versions - Latest release: 3 months ago - 11 dependent packages - 11 dependent repositories - 3.73 thousand downloads last month - 1 maintainer
hesim 0.5.4
Health Economic Simulation Modeling and Decision Analysis
15 versions - Latest release: 4 months ago - 1 dependent repositories - 680 downloads last month - 60 stars on GitHub - 1 maintainer
ammiBayes 1.0-2
Bayesian Ammi Model for Continuous Data
3 versions - Latest release: 4 months ago - 300 downloads last month - 1 maintainer
SPAS 2024.1.31
Stratified-Petersen Analysis System
4 versions - Latest release: 4 months ago - 1 dependent repositories - 181 downloads last month - 1 maintainer
EventPredInCure 1.0
Event Prediction Including Cured Population
1 version - Latest release: 5 months ago - 179 downloads last month - 1 maintainer
Top 2.7% on cran.r-project.org
phytools 2.1-1
Phylogenetic Tools for Comparative Biology (and Other Things)
49 versions - Latest release: 5 months ago - 65 dependent packages - 156 dependent repositories - 12 thousand downloads last month - 196 stars on GitHub - 1 maintainer
interactionR 0.1.7
Full Reporting of Interaction Analyses
8 versions - Latest release: 6 months ago - 618 downloads last month - 18 stars on GitHub - 1 maintainer
pexm 1.1.3
Loading a JAGS Module for the Piecewise Exponential Distribution
5 versions - Latest release: 6 months ago - 275 downloads last month - 4 stars on GitHub - 1 maintainer
interactionRCS 0.1.1
Calculate Estimates in Models with Interaction
2 versions - Latest release: 6 months ago - 247 downloads last month - 1 maintainer
epiphy 0.5.0
Analysis of Plant Disease Epidemics
2 versions - Latest release: 7 months ago - 1 dependent package - 264 downloads last month - 15 stars on GitHub - 1 maintainer
nhm 0.1.1
Non-Homogeneous Markov and Hidden Markov Multistate Models
2 versions - Latest release: 7 months ago - 186 downloads last month - 1 maintainer
hmsr 1.0.1
Multipopulation Evolutionary Strategy HMS
2 versions - Latest release: 7 months ago - 184 downloads last month - 3 stars on GitHub - 1 maintainer
cfda 0.11.0
Categorical Functional Data Analysis
7 versions - Latest release: 8 months ago - 294 downloads last month - 3 stars on GitHub - 1 maintainer
CEoptim 1.3
Cross-Entropy R Package for Optimization
4 versions - Latest release: 8 months ago - 1 dependent package - 1 dependent repositories - 326 downloads last month - 1 maintainer
BIOMASS 2.1.11
Estimating Aboveground Biomass and Its Uncertainty in Tropical Forests
16 versions - Latest release: 8 months ago - 5 dependent repositories - 831 downloads last month - 19 stars on GitHub - 1 maintainer
Top 6.0% on cran.r-project.org
markovchain 0.9.5
Easy Handling Discrete Time Markov Chains
54 versions - Latest release: 8 months ago - 8 dependent packages - 17 dependent repositories - 6.05 thousand downloads last month - 103 stars on GitHub - 1 maintainer
varTestnlme 1.3.5
Variance Components Testing for Linear and Nonlinear Mixed Effects Models
12 versions - Latest release: 8 months ago - 1 dependent package - 484 downloads last month - 2 stars on GitHub - 1 maintainer
stUPscales 1.0.3.5 removed
Spatio-Temporal Uncertainty Propagation Across Multiple Scales
5 versions - Latest release: 8 months ago - 32 downloads last month - 1 maintainer
wxgenR 1.3.6
A Stochastic Weather Generator with Seasonality
2 versions - Latest release: 8 months ago - 237 downloads last month - 1 maintainer
TrenchR 1.1.1
Tools for Microclimate and Biophysical Ecology
3 versions - Latest release: 9 months ago - 1 dependent repositories - 187 downloads last month - 9 stars on GitHub - 1 maintainer
eiCompare 3.0.4 removed
Compares Different Ecological Inference Methods
10 versions - Latest release: 9 months ago - 1 dependent repositories - 384 downloads last month - 3 stars on GitHub - 1 maintainer
ARCensReg 3.0.1
Fitting Univariate Censored Linear Regression Model with Autoregressive Errors
4 versions - Latest release: 9 months ago - 392 downloads last month - 1 maintainer
ARDL 0.2.4
ARDL, ECM and Bounds-Test for Cointegration
7 versions - Latest release: 9 months ago - 1 dependent package - 1 dependent repositories - 1.72 thousand downloads last month - 16 stars on GitHub - 1 maintainer
DelayedEffect.Design 1.1.3
Sample Size and Power Calculations using the APPLE, SEPPLE, APPLE+ and SEPPLE+ Methods
3 versions - Latest release: 9 months ago - 318 downloads last month - 1 maintainer
SightabilityModel 1.5.5
Wildlife Sightability Modeling
12 versions - Latest release: 9 months ago - 287 downloads last month - 1 stars on GitHub - 1 maintainer
flexmsm 0.1.1
A General Framework for Flexible Multi-State Survival Modelling
2 versions - Latest release: 11 months ago - 222 downloads last month - 1 maintainer
OneSampleMR 0.1.3
One Sample Mendelian Randomization and Instrumental Variable Analyses
4 versions - Latest release: about 1 year ago - 1 dependent repositories - 289 downloads last month - 13 stars on GitHub - 1 maintainer
surrosurv 1.1.26 removed
Evaluation of Failure Time Surrogate Endpoints in Individual Patient Data Meta-Analyses
7 versions - Latest release: about 1 year ago - 268 downloads last month - 1 stars on GitHub - 1 maintainer
Top 8.6% on cran.r-project.org
geiger 2.0.11
Analysis of Evolutionary Diversification
28 versions - Latest release: about 1 year ago - 43 dependent packages - 86 dependent repositories - 5.06 thousand downloads last month - 1 maintainer
eatRep 0.14.7
Educational Assessment Tools for Replication Methods
10 versions - Latest release: about 1 year ago - 1 dependent repositories - 260 downloads last month - 1 stars on GitHub - 1 maintainer
spBFA 1.3
Spatial Bayesian Factor Analysis
4 versions - Latest release: about 1 year ago - 254 downloads last month - 1 maintainer
Rchoice 0.3-6
Discrete Choice (Binary, Poisson and Ordered) Models with Random Parameters
10 versions - Latest release: about 1 year ago - 2 dependent packages - 4 dependent repositories - 1.42 thousand downloads last month - 3 stars on GitHub - 1 maintainer
eiPack 0.2-2
Ecological Inference and Higher-Dimension Data Management
9 versions - Latest release: over 1 year ago - 2 dependent packages - 9 dependent repositories - 843 downloads last month - 1 maintainer
Top 3.5% on cran.r-project.org
flexsurv 2.2.2
Flexible Parametric Survival and Multi-State Models
19 versions - Latest release: over 1 year ago - 48 dependent packages - 59 dependent repositories - 8.81 thousand downloads last month - 51 stars on GitHub - 1 maintainer
Top 7.9% on cran.r-project.org
BayesianTools 0.1.8
General-Purpose MCMC and SMC Samplers and Tools for Bayesian Statistics
9 versions - Latest release: over 1 year ago - 7 dependent packages - 33 dependent repositories - 112 stars on GitHub - 1 maintainer
CensSpatial 3.6 removed
Censored Spatial Models
10 versions - Latest release: over 1 year ago - 1 dependent package - 249 downloads last month - 1 maintainer
parfm 2.7.7 removed
Parametric Frailty Models
14 versions - Latest release: over 1 year ago - 2 dependent packages - 1 dependent repositories - 403 downloads last month - 1 maintainer
stochLAB 1.1.2
Stochastic Collision Risk Model
2 versions - Latest release: over 1 year ago - 1 dependent repositories - 176 downloads last month - 6 stars on GitHub - 1 maintainer
RIbench 1.0.2
Benchmark Suite for Indirect Methods for RI Estimation
3 versions - Latest release: over 1 year ago - 282 downloads last month - 1 maintainer
biodosetools 3.6.1
An R Shiny Application for Biological Dosimetry
2 versions - Latest release: over 1 year ago - 5 stars on GitHub - 1 maintainer
BaSTA 1.9.5 removed
Age-Specific Survival Analysis from Incomplete Capture-Recapture/Recovery Data
15 versions - Latest release: over 1 year ago - 543 downloads last month - 1 maintainer
womblR 1.0.5
Spatiotemporal Boundary Detection Model for Areal Unit Data
6 versions - Latest release: over 1 year ago - 2 dependent packages - 2 dependent repositories - 252 downloads last month - 1 maintainer
spCP 1.3
Spatially Varying Change Points
4 versions - Latest release: over 1 year ago - 226 downloads last month - 1 maintainer
qte 1.3.1 removed
Quantile Treatment Effects
6 versions - Latest release: over 1 year ago - 2 dependent packages - 1 dependent repositories - 312 downloads last month - 1 maintainer
oro.pet 0.2.7
Rigorous - Positron Emission Tomography
4 versions - Latest release: almost 2 years ago - 222 downloads last month - 1 maintainer
Top 10.0% on cran.r-project.org
RMark 3.0.0
R Code for Mark Analysis
27 versions - Latest release: almost 2 years ago - 5 dependent packages - 11 dependent repositories - 1.09 thousand downloads last month - 1 maintainer
HBSTM 1.0.2
Hierarchical Bayesian Space-Time Models for Gaussian Space-Time Data
3 versions - Latest release: about 2 years ago - 172 downloads last month - 1 maintainer
riAFTBART 0.3.2 removed
A Flexible Approach for Causal Inference with Multiple Treatments and Clustered Survival Outcomes
5 versions - Latest release: about 2 years ago - 172 downloads last month - 1 maintainer
BayesRGMM 2.2
Bayesian Robust Generalized Mixed Models for Longitudinal Data
5 versions - Latest release: about 2 years ago - 272 downloads last month - 1 maintainer
difNLR 1.4.1
DIF and DDF Detection by Non-Linear Regression Models
17 versions - Latest release: about 2 years ago - 2 dependent packages - 1 dependent repositories - 675 downloads last month - 6 stars on GitHub - 1 maintainer
fitteR 0.2.0
Fit Hundreds of Theoretical Distributions to Empirical Data
2 versions - Latest release: over 2 years ago - 265 downloads last month - 1 maintainer
Top 5.7% on cran.r-project.org
ltm 1.2-0
Latent Trait Models under IRT
37 versions - Latest release: over 2 years ago - 27 dependent packages - 33 dependent repositories - 9.05 thousand downloads last month - 27 stars on GitHub - 1 maintainer
Top 9.4% on cran.r-project.org
pder 1.0-2
Panel Data Econometrics with R
3 versions - Latest release: over 2 years ago - 2 dependent packages - 5 dependent repositories - 1.77 thousand downloads last month - 1 maintainer
rtdists 0.11-5
Response Time Distributions
13 versions - Latest release: over 2 years ago - 7 dependent packages - 15 dependent repositories - 1.8 thousand downloads last month - 42 stars on GitHub - 1 maintainer
cosa 2.1.0
Bound Constrained Optimal Sample Size Allocation
7 versions - Latest release: over 2 years ago - 290 downloads last month - 1 maintainer
EValue 4.1.3
Sensitivity Analyses for Unmeasured Confounding and Other Biases in Observational Studies and Met...
14 versions - Latest release: over 2 years ago - 2 dependent packages - 2 dependent repositories - 780 downloads last month - 1 maintainer
DFIT 1.1
Differential Functioning of Items and Tests
5 versions - Latest release: almost 3 years ago - 402 downloads last month - 1 maintainer
semmcmc 0.0.6
Bayesian Structural Equation Modeling in Multiple Omics Data Integration
2 versions - Latest release: about 3 years ago - 165 downloads last month - 1 maintainer
msmtools 2.0.1
Building Augmented Data to Run Multi-State Models with 'msm' Package
6 versions - Latest release: about 3 years ago - 905 downloads last month - 6 stars on GitHub - 1 maintainer
TREXr 1.0.0 removed
Tree Sap Flow Extractor
1 version - Latest release: about 3 years ago - 1 stars on GitHub
grmsem 1.1.0
Genetic-Relationship-Matrix Structural Equation Modelling (GRMSEM)
1 version - Latest release: over 3 years ago - 173 downloads last month - 1 maintainer
optBiomarker 1.0-28
Estimation of Optimal Number of Biomarkers for Two-Group Microarray Based Classifications at a Gi...
7 versions - Latest release: over 3 years ago - 207 downloads last month - 1 maintainer
horseshoenlm 0.0.6
Nonlinear Regression using Horseshoe Prior
1 version - Latest release: over 3 years ago - 199 downloads last month - 1 maintainer
iBATCGH 1.3.1 removed
Integrative Bayesian Analysis of Transcriptomic and CGH Data
5 versions - Latest release: over 3 years ago - 175 downloads last month - 1 maintainer
hmi 1.0.0 removed
Hierarchical Multiple Imputation
16 versions - Latest release: over 3 years ago - 1 dependent package - 4 stars on GitHub
bsam 1.1.3
Bayesian State-Space Models for Animal Movement
5 versions - Latest release: over 3 years ago - 632 downloads last month - 14 stars on GitHub - 1 maintainer
bayesCT 0.99.3
Simulation and Analysis of Adaptive Bayesian Clinical Trials
4 versions - Latest release: almost 4 years ago - 340 downloads last month - 12 stars on GitHub - 1 maintainer
NHMM 3.11 removed
Bayesian Non-Homogeneous Markov and Mixture Models for Multiple Time Series
7 versions - Latest release: almost 4 years ago
Top 8.0% on cran.r-project.org
gmnl 1.1-3.2
Multinomial Logit Models with Random Parameters
6 versions - Latest release: about 4 years ago - 3 dependent packages - 8 dependent repositories - 1.94 thousand downloads last month - 1 maintainer
decisionSupport 1.105.3
Quantitative Support of Decision Making under Uncertainty
18 versions - Latest release: about 4 years ago - 592 downloads last month - 1 maintainer
ATmet 1.2.1 removed
Advanced Tools for Metrology
2 versions - Latest release: about 4 years ago
endoSwitch 1.0.0
Endogenous Switching Regression Models
1 version - Latest release: over 4 years ago - 275 downloads last month - 1 stars on GitHub - 1 maintainer
intsurvbin 0.0.4 removed
Survival and Binary Data Integration
1 version - Latest release: over 4 years ago
frailtyEM 1.0.1
Fitting Frailty Models with the EM Algorithm
12 versions - Latest release: over 4 years ago - 1 dependent repositories - 400 downloads last month - 3 stars on GitHub - 1 maintainer
PanCanVarSel 0.0.3
Pan-Cancer Variable Selection
1 version - Latest release: over 4 years ago - 139 downloads last month - 1 maintainer
ccostr 0.1.0
Estimation of Mean Costs in Censored Data
1 version - Latest release: over 4 years ago - 300 downloads last month - 1 maintainer
simExam 1.0.0
Generate Simulated Data for IRT-Enabled Exams
1 version - Latest release: almost 5 years ago - 139 downloads last month - 0 stars on GitHub - 1 maintainer
fic 1.0.0
Focused Information Criteria for Model Comparison
1 version - Latest release: about 5 years ago - 192 downloads last month - 9 stars on GitHub - 1 maintainer
ccrs 0.1.0
Correct and Cluster Response Style Biased Data
1 version - Latest release: about 5 years ago - 198 downloads last month - 1 maintainer
elect 1.1.3
Estimation of Life Expectancies Using Multi-State Models
5 versions - Latest release: over 5 years ago - 245 downloads last month - 1 maintainer
CatDyn 1.1-1
Fishery Stock Assessment by Catch Dynamics Models
6 versions - Latest release: over 5 years ago - 259 downloads last month - 1 maintainer
CopCTS 1.0.0
Copula-Based Semiparametric Analysis for Time Series Data with Detection Limits
1 version - Latest release: over 5 years ago - 173 downloads last month - 1 maintainer
ICcalib 1.0.8
Cox Model with Interval-Censored Starting Time of a Covariate
4 versions - Latest release: almost 6 years ago - 188 downloads last month - 1 maintainer
EAinference 0.2.3
Estimator Augmentation and Simulation-Based Inference
4 versions - Latest release: over 6 years ago - 195 downloads last month - 1 maintainer
RcppTN 0.2-2
Rcpp-Based Truncated Normal Distribution RNG and Family
2 versions - Latest release: over 6 years ago - 3 dependent packages - 5 dependent repositories - 288 downloads last month - 6 stars on GitHub - 1 maintainer
clustMD 1.2.1
Model Based Clustering for Mixed Data
4 versions - Latest release: about 7 years ago - 2 dependent packages - 1 dependent repositories - 270 downloads last month - 1 maintainer
gems 1.1.1
Generalized Multistate Simulation Model
9 versions - Latest release: about 7 years ago - 345 downloads last month - 1 maintainer
rriskDistributions 2.1.2
Fitting Distributions to Given Data or Known Quantiles
6 versions - Latest release: about 7 years ago - 1 dependent package - 2 dependent repositories - 13.4 thousand downloads last month - 1 maintainer
ei 1.3-3
Ecological Inference
3 versions - Latest release: over 7 years ago - 1 dependent package - 6 dependent repositories - 250 downloads last month - 1 maintainer