Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

Top 7.5% on cran.r-project.org
Top 6.3% downloads on cran.r-project.org
Top 2.2% dependent packages on cran.r-project.org
Top 2.6% dependent repos on cran.r-project.org
Top 1.6% forks on cran.r-project.org

cran.r-project.org : qtl

Tools for Analyzing QTL Experiments

Registry - Source - Homepage - Documentation - JSON
purl: pkg:cran/qtl
License: GPL-3.0
Latest release: 6 months ago
First release: over 22 years ago
Dependent packages: 35
Dependent repositories: 80
Downloads: 3,840 last month
Stars: 76 on GitHub
Forks: 45 on GitHub
Docker dependents: 14
Docker downloads: 43,887
Total Commits: 2785
Committers: 19
Average commits per author: 146.579
Development Distribution Score (DDS): 0.572
More commit stats: commits.ecosyste.ms
See more repository details: repos.ecosyste.ms
Last synced: 1 day ago

qtl2 0.36
Quantitative Trait Locus Mapping in Experimental Crosses
8 versions - Latest release: 6 days ago - 7 dependent packages - 10 dependent repositories - 602 downloads last month - 34 stars on GitHub - 1 maintainer
statgenSTA 1.0.13
Single Trial Analysis (STA) of Field Trials
12 versions - Latest release: 13 days ago - 2 dependent packages - 1 dependent repositories - 593 downloads last month - 4 stars on GitHub - 1 maintainer
qtlDesign 0.953
Design of QTL (Quantitative Trait Locus) Experiments
8 versions - Latest release: about 1 month ago - 2 dependent repositories - 402 downloads last month - 1 maintainer
qtl2convert 0.30
Convert Data among QTL Mapping Packages
5 versions - Latest release: about 1 month ago - 1 dependent package - 1 dependent repositories - 399 downloads last month - 5 stars on GitHub - 1 maintainer
netgwas 1.14.3
Network-Based Genome Wide Association Studies
18 versions - Latest release: 2 months ago - 481 downloads last month - 1 maintainer
mppR 1.5.0
Multi-Parent Population QTL Analysis
6 versions - Latest release: 3 months ago - 270 downloads last month - 2 stars on GitHub - 1 maintainer
PopVar 1.3.1 removed
Genomic Breeding Tools: Genetic Variance Prediction and Cross-Validation
6 versions - Latest release: 4 months ago - 198 downloads last month - 1 maintainer
ctl 1.0.0-10
Correlated Trait Locus Mapping
8 versions - Latest release: 4 months ago - 252 downloads last month - 1 maintainer
ASMap 1.0-7 removed
Linkage Map Construction using the MSTmap Algorithm
16 versions - Latest release: 4 months ago - 1 dependent repositories - 393 downloads last month - 1 maintainer
cape 3.1.2
Combined Analysis of Pleiotropy and Epistasis for Diversity Outbred Mice
10 versions - Latest release: 4 months ago - 373 downloads last month - 1 maintainer
simcross 0.6
Simulate Experimental Crosses
2 versions - Latest release: 6 months ago - 2 dependent repositories - 190 downloads last month - 6 stars on GitHub - 1 maintainer
QTLRel 1.14
Tools for Mapping of Quantitative Traits of Genetically Related Individuals and Calculating Ident...
29 versions - Latest release: 9 months ago - 3 dependent repositories - 568 downloads last month - 1 maintainer
publipha 0.1.2
Bayesian Meta-Analysis with Publications Bias and P-Hacking
3 versions - Latest release: about 1 year ago - 178 downloads last month - 1 maintainer
xoi 0.72
Tools for Analyzing Crossover Interference
8 versions - Latest release: about 1 year ago - 196 downloads last month - 4 stars on GitHub - 1 maintainer
dQTG.seq 1.0.2
A BSA Software for Detecting All Types of QTLs in BC, DH, RIL and F2
3 versions - Latest release: about 1 year ago - 317 downloads last month - 1 maintainer
onemap 3.0.0
Construction of Genetic Maps in Experimental Crosses
16 versions - Latest release: over 1 year ago - 1 dependent repositories - 661 downloads last month - 32 stars on GitHub - 1 maintainer
lineup 0.42
Lining Up Two Sets of Measurements
7 versions - Latest release: almost 2 years ago - 231 downloads last month - 4 stars on GitHub - 1 maintainer
BayesNetBP 1.6.1
Bayesian Network Belief Propagation
8 versions - Latest release: about 2 years ago - 329 downloads last month - 18 stars on GitHub - 1 maintainer
fssemR 0.1.8
Fused Sparse Structural Equation Models to Jointly Infer Gene Regulatory Network
5 versions - Latest release: over 2 years ago - 1 dependent repositories - 210 downloads last month - 4 stars on GitHub - 1 maintainer
qtlcharts 0.16
Interactive Graphics for QTL Experiments
9 versions - Latest release: over 2 years ago - 1 dependent repositories - 257 downloads last month - 84 stars on GitHub - 1 maintainer
rNeighborQTL 1.1.2
Interval Mapping for Quantitative Trait Loci Underlying Neighbor Effects
4 versions - Latest release: about 3 years ago - 732 downloads last month - 1 maintainer
QTL.gCIMapping 3.3.1
QTL Genome-Wide Composite Interval Mapping
8 versions - Latest release: over 3 years ago - 1 dependent package - 388 downloads last month - 1 maintainer
QTL.gCIMapping.GUI 2.1.1
QTL Genome-Wide Composite Interval Mapping with Graphical User Interface
4 versions - Latest release: over 3 years ago - 225 downloads last month - 1 maintainer
qtlnet 1.5.4
Causal Inference of QTL Networks
7 versions - Latest release: about 4 years ago - 1 dependent package - 2 dependent repositories - 181 downloads last month - 1 maintainer
wgaim 2.0-1
Whole Genome Average Interval Mapping for QTL Detection and Estimation using ASReml-R
24 versions - Latest release: over 4 years ago - 4 dependent repositories - 362 downloads last month - 1 maintainer
qtlbook 0.18-8
Datasets for the R/qtl Book
9 versions - Latest release: almost 5 years ago - 207 downloads last month - 5 stars on GitHub - 1 maintainer
MDSMap 1.1
High Density Genetic Linkage Mapping using Multidimensional Scaling
2 versions - Latest release: almost 6 years ago - 2 dependent packages - 2 dependent repositories - 252 downloads last month - 1 maintainer
GenomicMating 2.0 removed
Efficient Breeding by Genomic Mating
5 versions - Latest release: almost 6 years ago - 1 maintainer
genotypeR 0.0.1.8 removed
SNP Genotype Marker Design and Analysis
3 versions - Latest release: almost 6 years ago - 1 stars on GitHub
qtlhot 1.0.4
Inference for QTL Hotspots
11 versions - Latest release: about 6 years ago - 1 dependent repositories - 215 downloads last month - 1 maintainer
MPR.genotyping 0.8 removed
Maximum Parsimony of Recombination to Infer Parental Genotypes
1 version - Latest release: over 6 years ago - 1 maintainer
LinkageMapView 2.1.2
Plot Linkage Group Maps with Quantitative Trait Loci
4 versions - Latest release: over 6 years ago - 276 downloads last month - 7 stars on GitHub - 1 maintainer
varbvs 2.0.0
Large-Scale Bayesian Variable Selection Using Variational Methods
7 versions - Latest release: almost 8 years ago - 1 dependent package - 2 dependent repositories - 273 downloads last month - 41 stars on GitHub - 1 maintainer
Top 5.1% on cran.r-project.org
agridat 1.8.1
Agricultural Datasets
23 versions - Latest release: almost 10 years ago - 8 dependent packages - 8 dependent repositories - 2.7 thousand downloads last month - 98 stars on GitHub - 1 maintainer
mQTL 1.0 removed
Metabolomic Quantitative Trait Locus Mapping
1 version - Latest release: over 10 years ago - 1 dependent package