Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

Top 6.6% dependent packages on cran.r-project.org
Top 9.2% dependent repos on cran.r-project.org
Top 5.8% forks on cran.r-project.org

cran.r-project.org : seqminer

Efficiently Read Sequence Data (VCF Format, BCF Format, METAL Format and BGEN Format) into R

Registry - Source - Homepage - Documentation - JSON
purl: pkg:cran/seqminer
Keywords: annotation, bcf, bgen, meta-analysis, next-generation-sequencing, plink, sequencing, tabix, vcf, workflow
License: xpp,Zed
Latest release: over 10 years ago
First release: about 11 years ago
Dependent packages: 7
Dependent repositories: 10
Downloads: 1,096 last month
Stars: 30 on GitHub
Forks: 12 on GitHub
Docker dependents: 7
Docker downloads: 318
Total Commits: 192
Committers: 8
Average commits per author: 24.0
Development Distribution Score (DDS): 0.229
More commit stats: commits.ecosyste.ms
See more repository details: repos.ecosyste.ms
Last synced: 25 days ago

Top 7.5% on cran.r-project.org
SKAT 2.2.5
SNP-Set (Sequence) Kernel Association Test
27 versions - Latest release: over 1 year ago - 16 dependent packages - 19 dependent repositories - 1.21 thousand downloads last month - 1 maintainer
sumFREGAT 1.2.5
Fast Region-Based Association Tests on Summary Statistics
8 versions - Latest release: almost 2 years ago - 289 downloads last month - 1 maintainer
GhostKnockoff 0.1.0
The Knockoff Inference Using Summary Statistics
1 version - Latest release: over 2 years ago - 196 downloads last month - 1 maintainer
KnockoffScreen 0.3.0
Whole-Genome Sequencing Data Analysis via Knockoff Statistics
3 versions - Latest release: over 2 years ago - 269 downloads last month - 1 maintainer
WGScan 0.1
A Genome-Wide Scan Statistic Framework for Whole-Genome Sequence Data Analysis
1 version - Latest release: about 5 years ago - 181 downloads last month - 1 maintainer
sequenza 3.0.0 removed
Copy Number Estimation from Tumor Genome Sequencing Data
10 versions - Latest release: about 5 years ago - 9 dependent repositories - 410 downloads last month - 1 maintainer
GenoScan 0.1
A Genome-Wide Scan Statistic Framework for Whole-Genome Sequence Data Analysis
1 version - Latest release: over 5 years ago - 203 downloads last month - 1 maintainer