Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
Top 3.6% on cran.r-project.org
Top 1.4% downloads on cran.r-project.org
Top 0.5% dependent packages on cran.r-project.org
Top 0.6% dependent repos on cran.r-project.org
Top 0.7% forks on cran.r-project.org
Top 1.4% downloads on cran.r-project.org
Top 0.5% dependent packages on cran.r-project.org
Top 0.6% dependent repos on cran.r-project.org
Top 0.7% forks on cran.r-project.org
cran.r-project.org : vegan
Community Ecology Package
Registry
-
Source
- Documentation
- JSON
purl: pkg:cran/vegan
Keywords: ecological-modelling, ecology, ordination, r
License: GPL-2.0
Latest release: over 1 year ago
First release: over 22 years ago
Dependent packages: 202
Dependent repositories: 563
Downloads: 91,299 last month
Stars: 426 on GitHub
Forks: 94 on GitHub
Docker dependents: 35
Docker downloads: 39
Total Commits: 4572
Committers: 36
Average commits per author: 127.0
Development Distribution Score (DDS): 0.479
More commit stats: commits.ecosyste.ms
See more repository details: repos.ecosyste.ms
Last synced: about 12 hours ago
netcom 2.1.6 removed
NETwork COMparison Inference4 versions - Latest release: almost 2 years ago - 159 downloads last month - 4 stars on GitHub - 1 maintainer
netassoc 0.7.0
Inference of Species Associations from Co-Occurrence Data7 versions - Latest release: almost 2 years ago - 173 downloads last month - 1 maintainer
Top 8.4% on cran.r-project.org
9 versions - Latest release: almost 2 years ago - 3 dependent packages - 14 dependent repositories - 1.68 thousand downloads last month - 1 maintainer
dimRed 0.2.6
A Framework for Dimensionality Reduction9 versions - Latest release: almost 2 years ago - 3 dependent packages - 14 dependent repositories - 1.68 thousand downloads last month - 1 maintainer
EvaluateCore 0.1.3 removed
Quality Evaluation of Core Collections3 versions - Latest release: almost 2 years ago - 644 downloads last month - 0 stars on GitHub - 1 maintainer
zetadiv 1.2.1
Functions to Compute Compositional Turnover Using Zeta Diversity7 versions - Latest release: almost 2 years ago - 1 dependent repositories - 278 downloads last month - 1 maintainer
rareNMtests 1.2
Ecological and Biogeographical Null Model Tests for Comparing Rarefaction Curves3 versions - Latest release: almost 2 years ago - 179 downloads last month - 1 maintainer
NST 3.1.10
Normalized Stochasticity Ratio6 versions - Latest release: almost 2 years ago - 561 downloads last month - 22 stars on GitHub - 1 maintainer
iCAMP 1.5.12
Infer Community Assembly Mechanisms by Phylogenetic-Bin-Based Null Model Analysis4 versions - Latest release: almost 2 years ago - 1 dependent package - 1 dependent repositories - 757 downloads last month - 58 stars on GitHub - 1 maintainer
PopGenReport 3.0.7
A Simple Framework to Analyse Population and Landscape Genetic Data13 versions - Latest release: almost 2 years ago - 2 dependent packages - 5 dependent repositories - 1.31 thousand downloads last month - 5 stars on GitHub - 1 maintainer
Top 9.7% on cran.r-project.org
46 versions - Latest release: about 2 years ago - 35 dependent packages - 91 dependent repositories - 25.6 thousand downloads last month - 1 maintainer
taxize 0.9.100
Taxonomic Information from Around the Web46 versions - Latest release: about 2 years ago - 35 dependent packages - 91 dependent repositories - 25.6 thousand downloads last month - 1 maintainer
glottospace 0.0.112
Language Mapping and Geospatial Analysis of Linguistic and Cultural Data3 versions - Latest release: about 2 years ago - 193 downloads last month - 18 stars on GitHub - 1 maintainer
Top 8.8% on cran.r-project.org
14 versions - Latest release: about 2 years ago - 5 dependent packages - 11 dependent repositories - 2.04 thousand downloads last month - 1 maintainer
betapart 1.5.6
Partitioning Beta Diversity into Turnover and Nestedness Components14 versions - Latest release: about 2 years ago - 5 dependent packages - 11 dependent repositories - 2.04 thousand downloads last month - 1 maintainer
SRS 0.2.3
Scaling with Ranked Subsampling7 versions - Latest release: about 2 years ago - 1 dependent repositories - 378 downloads last month - 1 maintainer
diathor 0.1.0
Calculate Ecological Information and Diatom Based Indices6 versions - Latest release: about 2 years ago - 309 downloads last month - 1 maintainer
cati 0.99.4
Community Assembly by Traits: Individuals and Beyond7 versions - Latest release: about 2 years ago - 377 downloads last month - 10 stars on GitHub - 1 maintainer
memgene 1.0.2
Spatial Pattern Detection in Genetic Distance Data Using Moran's Eigenvector Maps4 versions - Latest release: about 2 years ago - 189 downloads last month - 1 maintainer
Top 8.0% on cran.r-project.org
11 versions - Latest release: over 2 years ago - 30 dependent packages - 69 dependent repositories - 66.1 thousand downloads last month - 22 stars on GitHub - 1 maintainer
permute 0.9-7
Functions for Generating Restricted Permutations of Data11 versions - Latest release: over 2 years ago - 30 dependent packages - 69 dependent repositories - 66.1 thousand downloads last month - 22 stars on GitHub - 1 maintainer
sharpshootR 1.8.4
A Soil Survey Toolkit21 versions - Latest release: over 2 years ago - 1 dependent package - 4 dependent repositories - 820 downloads last month - 17 stars on GitHub - 1 maintainer
NicheBarcoding 1.0
Niche-model-Based Species Identification1 version - Latest release: over 2 years ago - 167 downloads last month - 0 stars on GitHub - 1 maintainer
aPCoA 1.3
Covariate Adjusted PCoA Plot4 versions - Latest release: over 2 years ago - 314 downloads last month - 1 maintainer
MorphoTools2 0.9.1
Multivariate Morphometric Analysis7 versions - Latest release: over 2 years ago - 303 downloads last month - 5 stars on GitHub - 1 maintainer
gdm 1.5.0
Generalized Dissimilarity Modeling29 versions - Latest release: over 2 years ago - 1 dependent package - 1 dependent repositories - 662 downloads last month - 28 stars on GitHub - 1 maintainer
MapeBay 0.1.0 removed
Multivariate Analysis of Variance Panel, PERMANOVA and Bayesian1 version - Latest release: over 2 years ago - 160 downloads last month - 1 maintainer
microbial 0.0.20
Do 16s Data Analysis and Generate Figures4 versions - Latest release: over 2 years ago - 250 downloads last month - 1 maintainer
bipartiteD3 0.3.0
Interactive Bipartite Graphs3 versions - Latest release: over 2 years ago - 275 downloads last month - 1 maintainer
dissCqN 0.1.0
Multiple Assemblage Dissimilarity for Orders q = 0-N1 version - Latest release: over 2 years ago - 201 downloads last month - 0 stars on GitHub - 1 maintainer
mefa 3.2-8
Multivariate Data Handling in Ecology and Biogeography29 versions - Latest release: over 2 years ago - 2 dependent packages - 5 dependent repositories - 694 downloads last month - 1 stars on GitHub - 1 maintainer
biosurvey 0.1.1 removed
Tools for Biological Survey Planning2 versions - Latest release: over 2 years ago - 277 downloads last month - 7 stars on GitHub - 1 maintainer
edmcr 0.2.0
Euclidean Distance Matrix Completion Tools2 versions - Latest release: over 2 years ago - 1 dependent package - 1 dependent repositories - 307 downloads last month - 3 stars on GitHub - 1 maintainer
GRNNs 0.1.0
General Regression Neural Networks Package1 version - Latest release: over 2 years ago - 143 downloads last month - 1 maintainer
CNVRG 1.0.0
Dirichlet Multinomial Modeling of Relative Abundance Data3 versions - Latest release: over 2 years ago - 177 downloads last month - 1 maintainer
comsimitv 0.1.5
Flexible Framework for Simulating Community Assembly2 versions - Latest release: almost 3 years ago - 205 downloads last month - 1 maintainer
analogue 0.17-6
Analogue and Weighted Averaging Methods for Palaeoecology29 versions - Latest release: almost 3 years ago - 4 dependent packages - 7 dependent repositories - 919 downloads last month - 14 stars on GitHub - 1 maintainer
ProcMod 1.0.8
Informative Procrustean Matrix Correlation4 versions - Latest release: almost 3 years ago - 160 downloads last month - 1 maintainer
Rraven 1.0.13
Connecting R and 'Raven' Sound Analysis Software14 versions - Latest release: about 3 years ago - 1 dependent package - 1 dependent repositories - 390 downloads last month - 7 stars on GitHub - 1 maintainer
HierDpart 1.5.0 removed
Partitioning Hierarchical Diversity and Differentiation Across Metrics and Scales, from Genes to ...5 versions - Latest release: about 3 years ago - 3 stars on GitHub - 1 maintainer
CommEcol 1.7.1 removed
Community Ecology Analyses4 versions - Latest release: about 3 years ago - 255 downloads last month - 1 maintainer
smartsnp 1.1.0
Fast Multivariate Analyses of Big Genomic Data1 version - Latest release: about 3 years ago - 1 dependent repositories - 242 downloads last month - 1 maintainer
PolicyPortfolios 0.2.2
Tools for Managing, Measuring and Visualizing Policy Portfolios2 versions - Latest release: about 3 years ago - 166 downloads last month - 1 stars on GitHub - 1 maintainer
EcotoneFinder 0.2.3
Characterising and Locating Ecotones and Communities2 versions - Latest release: about 3 years ago - 1 dependent repositories - 208 downloads last month - 1 maintainer
tapnet 0.3
Trait Matching and Abundance for Predicting Bipartite Networks1 version - Latest release: over 3 years ago - 120 downloads last month - 1 stars on GitHub - 1 maintainer
rdacca.hp 0.3.0
Hierarchical and Variation Partitioning for Canonical Analysis17 versions - Latest release: over 3 years ago - 1 dependent repositories - 736 downloads last month - 16 stars on GitHub - 1 maintainer
node2vec 0.1.0
Algorithmic Framework for Representational Learning on Graphs1 version - Latest release: over 3 years ago - 217 downloads last month - 1 maintainer
primer 1.2.0
Functions and Data for the Book, a Primer of Ecology with R5 versions - Latest release: over 3 years ago - 1 dependent package - 1 dependent repositories - 813 downloads last month - 1 maintainer
codyn 2.0.5
Community Dynamics Metrics9 versions - Latest release: over 3 years ago - 1 dependent repositories - 410 downloads last month - 32 stars on GitHub - 1 maintainer
betaper 1.1-2
Taxonomic Uncertainty on Multivariate Analyses of Ecological Data4 versions - Latest release: over 3 years ago - 247 downloads last month - 1 maintainer
easyCODA 0.34.3
Compositional Data Analysis in Practice5 versions - Latest release: over 3 years ago - 231 downloads last month - 31 stars on GitHub - 1 maintainer
paco 0.4.2
Procrustes Application to Cophylogenetic Analysis9 versions - Latest release: over 3 years ago - 1 dependent package - 1 dependent repositories - 252 downloads last month - 1 maintainer
recluster 2.9
Ordination Methods for the Analysis of Beta-Diversity Indices8 versions - Latest release: almost 4 years ago - 1 dependent repositories - 574 downloads last month - 3 stars on GitHub - 1 maintainer
DarkDiv 0.3.0
Estimating Dark Diversity and Site-Specific Species Pools3 versions - Latest release: almost 4 years ago - 182 downloads last month - 1 maintainer
ecospace 1.4.2
Simulating Community Assembly and Ecological Diversification Using Ecospace Frameworks7 versions - Latest release: almost 4 years ago - 263 downloads last month - 4 stars on GitHub - 1 maintainer
RTCC 0.1.1
Detecting Trait Clustering in Environmental Gradients2 versions - Latest release: almost 4 years ago - 130 downloads last month - 1 maintainer
Top 8.6% on cran.r-project.org
28 versions - Latest release: almost 4 years ago - 24 dependent packages - 72 dependent repositories - 4.79 thousand downloads last month - 1 maintainer
picante 1.8.2
Integrating Phylogenies and Ecology28 versions - Latest release: almost 4 years ago - 24 dependent packages - 72 dependent repositories - 4.79 thousand downloads last month - 1 maintainer
fieldRS 0.2.3 removed
Remote Sensing Field Work Tools5 versions - Latest release: almost 4 years ago - 12 stars on GitHub - 1 maintainer
SSP 1.0.1
Simulated Sampling Procedure for Community Ecology1 version - Latest release: about 4 years ago - 1 dependent repositories - 161 downloads last month - 2 stars on GitHub - 1 maintainer
metacom 1.5.3
Analysis of the 'Elements of Metacommunity Structure'15 versions - Latest release: about 4 years ago - 1 dependent package - 1 dependent repositories - 364 downloads last month - 1 maintainer
abdiv 0.2.0
Alpha and Beta Diversity Measures1 version - Latest release: over 4 years ago - 3 dependent repositories - 407 downloads last month - 9 stars on GitHub - 1 maintainer
PCPS 1.0.7
Principal Coordinates of Phylogenetic Structure8 versions - Latest release: over 4 years ago - 2 dependent repositories - 251 downloads last month - 1 maintainer
SYNCSA 1.3.4
Analysis of Functional and Phylogenetic Patterns in Metacommunities9 versions - Latest release: over 4 years ago - 1 dependent package - 3 dependent repositories - 338 downloads last month - 1 maintainer
MEDITS 0.1.7 removed
Analysis of MEDITS-Like Survey Data1 version - Latest release: over 4 years ago - 142 downloads last month - 1 maintainer
propr 4.2.6 removed
Calculating Proportionality Between Vectors of Compositional Data21 versions - Latest release: over 4 years ago - 2 dependent packages - 7 dependent repositories - 49 stars on GitHub
MEclustnet 1.2.2
Fit the Mixture of Experts Latent Position Cluster Model to Network Data5 versions - Latest release: over 4 years ago - 174 downloads last month - 1 maintainer
hilldiv 1.5.1
Integral Analysis of Diversity Based on Hill Numbers1 version - Latest release: over 4 years ago - 1 dependent repositories - 243 downloads last month - 7 stars on GitHub - 1 maintainer
HTSSIP 1.4.1
High Throughput Sequencing of Stable Isotope Probing Data Analysis8 versions - Latest release: over 4 years ago - 1 dependent package - 1 dependent repositories - 298 downloads last month - 1 maintainer
HMP 2.0.1
Hypothesis Testing and Power Calculations for Comparing Metagenomic Samples from HMP11 versions - Latest release: over 4 years ago - 1 dependent package - 1 dependent repositories - 353 downloads last month - 1 maintainer
segRDA 1.0.2
Modeling Non-Continuous Linear Responses of Ecological Data1 version - Latest release: almost 5 years ago - 2 dependent repositories - 115 downloads last month - 2 stars on GitHub - 1 maintainer
RVenn 1.1.0
Set Operations for Many Sets2 versions - Latest release: almost 5 years ago - 1 dependent package - 2 dependent repositories - 364 downloads last month - 1 maintainer
cassandRa 0.1.0 removed
Finds Missing Links and Metric Confidence Intervals in Ecological Bipartite Networks1 version - Latest release: almost 5 years ago - 154 downloads last month - 1 maintainer
factorMerger 0.4.0 removed
The Merging Path Plot6 versions - Latest release: almost 5 years ago - 2 dependent packages - 3 dependent repositories
BBI 0.3.0
Benthic Biotic Indices Calculation from Composition Data2 versions - Latest release: over 5 years ago - 206 downloads last month - 1 stars on GitHub - 1 maintainer
SparseLPM 1.0
The Sparse Latent Position Model for Nonnegative Interaction Data1 version - Latest release: over 5 years ago - 110 downloads last month - 1 maintainer
bcp 4.0.3 removed
Bayesian Analysis of Change Point Problems28 versions - Latest release: over 5 years ago - 3 dependent packages - 8 dependent repositories - 1.19 thousand downloads last month - 1 maintainer
RAM 1.2.1.7 removed
R for Amplicon-Sequencing-Based Microbial-Ecology7 versions - Latest release: almost 6 years ago
spaceNet 1.0.1
Latent Space Models for Multidimensional Networks3 versions - Latest release: about 6 years ago - 141 downloads last month - 1 maintainer
soundecology 1.3.3
Soundscape Ecology8 versions - Latest release: about 6 years ago - 2 dependent repositories - 489 downloads last month - 22 stars on GitHub - 1 maintainer
grapherator 1.0.0
A Modular Multi-Step Graph Generator1 version - Latest release: over 6 years ago - 1 dependent package - 1 dependent repositories - 150 downloads last month - 9 stars on GitHub - 1 maintainer
FreeSortR 1.3
Free Sorting Data Analysis4 versions - Latest release: over 6 years ago - 187 downloads last month - 1 maintainer
phylotools 0.2.2
Phylogenetic Tools for Eco-Phylogenetics5 versions - Latest release: over 6 years ago - 1 dependent repositories - 452 downloads last month - 10 stars on GitHub - 1 maintainer
mpmcorrelogram 0.1-4
Multivariate Partial Mantel Correlogram5 versions - Latest release: over 6 years ago - 181 downloads last month - 1 maintainer
dave 2.0 removed
Functions for "Data Analysis in Vegetation Ecology"4 versions - Latest release: over 6 years ago - 1 dependent package - 339 downloads last month - 1 maintainer
SigTree 1.10.6
Identify and Visualize Significantly Responsive Branches in a Phylogenetic Tree10 versions - Latest release: over 6 years ago - 189 downloads last month - 1 maintainer
ecolottery 1.0.0
Coalescent-Based Simulation of Ecological Communities1 version - Latest release: almost 7 years ago - 543 downloads last month - 15 stars on GitHub - 1 maintainer
Demerelate 0.9-3 removed
Functions to Calculate Relatedness on Diploid Genetic Data6 versions - Latest release: about 7 years ago - 1 dependent package
DiversityOccupancy 1.0.6 removed
Building Diversity Models from Multiple Species Occupancy Models7 versions - Latest release: about 7 years ago - 455 downloads last month - 1 maintainer
rich 1.0.1 removed
Computes and Compares Species Richnesses4 versions - Latest release: over 7 years ago - 128 downloads last month - 1 maintainer
spaa 0.2.2
SPecies Association Analysis6 versions - Latest release: almost 8 years ago - 1 dependent package - 2 dependent repositories - 692 downloads last month - 12 stars on GitHub - 1 maintainer
biogeo 1.0 removed
Point Data Quality Assessment and Coordinate Conversion1 version - Latest release: about 8 years ago - 1 dependent package - 1 dependent repositories - 451 downloads last month - 1 maintainer
MiSPU 1.0
Microbiome Based Sum of Powered Score (MiSPU) Tests1 version - Latest release: about 8 years ago - 1 dependent repositories - 134 downloads last month - 1 maintainer
loe 1.1
Local Ordinal Embedding2 versions - Latest release: over 8 years ago - 2 dependent packages - 9 dependent repositories - 1.15 thousand downloads last month - 1 maintainer
bingat 1.2.2
Binary Graph Analysis Tools4 versions - Latest release: over 8 years ago - 224 downloads last month - 1 maintainer
ordiBreadth 1.0
Ordinated Diet Breadth1 version - Latest release: over 8 years ago - 116 downloads last month - 1 maintainer
entropart 1.4.1
Entropy Partitioning to Measure Diversity26 versions - Latest release: over 8 years ago - 4 dependent packages - 11 dependent repositories - 748 downloads last month - 8 stars on GitHub - 1 maintainer
eHOF 1.5.9
Extended HOF (Huisman-Olff-Fresco) Models18 versions - Latest release: almost 9 years ago - 444 downloads last month - 1 maintainer
tspmeta 1.2
Instance Feature Calculation and Evolutionary Instance Generation for the Traveling Salesman Problem3 versions - Latest release: almost 9 years ago - 1 dependent repositories - 142 downloads last month - 5 stars on GitHub - 1 maintainer
CommunityCorrelogram 1.0 removed
Ecological Community Correlogram1 version - Latest release: almost 10 years ago
blender 0.1.2
Analyze biotic homogenization of landscapes3 versions - Latest release: about 10 years ago - 196 downloads last month - 1 maintainer
iDynoR 1.0 removed
R Analysis package for iDynoMiCS Simulation Results1 version - Latest release: over 10 years ago
cwm 0.0.3 removed
Cluster Weighted Models by EM algorithm2 versions - Latest release: over 10 years ago
WeightedCluster 1.0.1
Clustering of Weighted Data9 versions - Latest release: over 10 years ago - 5 dependent packages - 2 dependent repositories - 674 downloads last month - 1 maintainer