crates.io "alignment" keyword
yara-seqan2-sys 0.1.3 💰
Vendored SeqAn2 headers for the YARA read mapper4 versions - Latest release: 1 day ago - 81 downloads total - 0 stars on GitHub - 1 maintainer
yara-mapper-sys 0.1.3 💰
Low-level FFI bindings to the YARA read mapper (SeqAn2)4 versions - Latest release: 1 day ago - 71 downloads total - 0 stars on GitHub - 1 maintainer
yara-mapper 0.1.3 💰
Safe Rust wrapper for the YARA read mapper4 versions - Latest release: 1 day ago - 57 downloads total - 0 stars on GitHub - 1 maintainer
maligned 0.2.1
A memory alignment library4 versions - Latest release: almost 6 years ago - 5 dependent packages - 52 dependent repositories - 151 thousand downloads total - 1 stars on GitHub - 1 maintainer
ontosim 0.2.4
Structural and semantic similarity comparison of ontology trees6 versions - Latest release: about 12 hours ago - 46 downloads total - 0 stars on GitHub - 1 maintainer
zoe 0.0.26
A nightly library for viral genomics10 versions - Latest release: 3 days ago - 3.42 thousand downloads total - 7 stars on GitHub - 1 maintainer
alignment-exporter-derive 0.1.3
Proc macro providing alignment info for a user-defined struct.4 versions - Latest release: over 1 year ago - 5.04 thousand downloads total - 0 stars on GitHub - 1 maintainer
bsalign 0.7.0
Rust bindings for the bsalign C library17 versions - Latest release: 6 months ago - 8.94 thousand downloads total - 3 stars on GitHub - 1 maintainer
ontosim-local 0.1.0
Command line driver that demonstrates use of the ontosim lib with a local text embedding model1 version - Latest release: 3 days ago - 0 downloads total - 1 maintainer
aligned-cmov 2.3.0
Fast constant-time conditional moves of aligned bytes4 versions - Latest release: almost 3 years ago - 4 dependent packages - 16 dependent repositories - 106 thousand downloads total - 53 stars on GitHub - 1 maintainer
miniprot-sys 0.1.0
Bindings to libminiprot1 version - Latest release: about 3 years ago - 1.63 thousand downloads total - 0 stars on GitHub - 1 maintainer
libwfa2 0.1.1
Bindings to the C implementation of WFA2-lib2 versions - Latest release: over 1 year ago - 2.63 thousand downloads total - 0 stars on GitHub - 1 maintainer
ansi-align 0.2.2
Text alignment library with ANSI escape sequence and Unicode support4 versions - Latest release: 6 months ago - 1.2 thousand downloads total - 0 stars on GitHub - 1 maintainer
bammap2 0.1.7
A lightweight wrapper to run minimap2 (v2.30) alignments directly on BAM file6 versions - Latest release: 6 days ago - 70 downloads total - 1 maintainer
scrubby 0.4.0
Remove or extract background taxa for metagenomic diagnostic applications3 versions - Latest release: over 1 year ago - 3.65 thousand downloads total - 16 stars on GitHub - 1 maintainer
aligned-vec 0.6.4
Aligned vector and box containers12 versions - Latest release: 12 months ago - 19 dependent packages - 24 dependent repositories - 36.1 million downloads total - 34 stars on GitHub - 1 maintainer
ksw2rs 0.1.3
Native Rust port of ksw2 (ksw2_extz2_sse) with stable-Rust SIMD backends1 version - Latest release: 8 days ago - 0 downloads total - 0 stars on GitHub - 1 maintainer
align-cli 0.4.1
A command line interface for easily aligning sequences.10 versions - Latest release: 11 months ago - 12.8 thousand downloads total - 9 stars on GitHub - 1 maintainer
seqalign 0.2.3
Sequence alignment using edit operations5 versions - Latest release: over 3 years ago - 3 dependent packages - 5 dependent repositories - 55.3 thousand downloads total - 1 stars on GitHub - 1 maintainer
virust-locator 0.1.4
A tool for generating sequence locators for HIV/SIV sequences, resembling the functionality of th...3 versions - Latest release: 9 months ago - 1.51 thousand downloads total - 0 stars on GitHub - 1 maintainer
mmr 0.1.7
Minimap2 CLI written in rust using bindings with BINSEQ and VBINSEQ support.5 versions - Latest release: 3 months ago - 1.81 thousand downloads total - 17 stars on GitHub - 1 maintainer
block-aligner 0.5.1
SIMD-accelerated library for computing global and X-drop affine gap penalty sequence-to-sequence ...11 versions - Latest release: over 1 year ago - 2 dependent repositories - 18.3 thousand downloads total - 125 stars on GitHub - 1 maintainer
fastga-rs 0.1.1
Rust bindings for FastGA genome aligner with extended CIGAR support2 versions - Latest release: 4 months ago - 390 downloads total - 1 maintainer
alass-cli 2.0.0
Automatic Language-Agnostic Subtitle Synchronization (Command Line Tool)5 versions - Latest release: over 6 years ago - 9.79 thousand downloads total - 1,213 stars on GitHub - 1 maintainer
aligned_alloc
Provides cross-platform primitives for aligned memory allocation4 versions - Latest release: 14 days ago - 10 dependent packages - 19 dependent repositories - 131 thousand downloads total - 15 stars on GitHub - 1 maintainer
aa2nucaln 0.1.1
Convert an amino acid alignment into a nucleotide alignment.1 version - Latest release: 8 months ago - 547 downloads total - 0 stars on GitHub - 1 maintainer
minimap2 0.1.31+minimap2.2.30
Bindings to libminimap226 versions - Latest release: 15 days ago - 1 dependent package - 1 dependent repositories - 36.1 thousand downloads total - 108 stars on GitHub - 1 maintainer
simd_aligned 0.6.1
Safe and fast SIMD-aligned data structures with easy and transparent 'flat' access.11 versions - Latest release: about 1 year ago - 1 dependent package - 2 dependent repositories - 23.9 thousand downloads total - 8 stars on GitHub - 1 maintainer
minimap2-sys 0.1.30+minimap2.2.30
Bindings to libminimap224 versions - Latest release: about 2 months ago - 1 dependent package - 1 dependent repositories - 45.5 thousand downloads total - 100 stars on GitHub - 1 maintainer
seqtui 0.1.1
Fast TUI toolkit for viewing, translating, and manipulating biological sequences.2 versions - Latest release: about 2 months ago - 36 downloads total - 1 maintainer
rustalign-cli 0.2.0
Ultrafast DNA sequence aligner using FM-index and Smith-Waterman1 version - Latest release: 16 days ago - 0 downloads total - 1 maintainer
rustalign-simd 0.2.0
Ultrafast DNA sequence aligner using FM-index and Smith-Waterman1 version - Latest release: 16 days ago - 0 downloads total - 1 maintainer
rustalign-fmindex 0.2.0
Ultrafast DNA sequence aligner using FM-index and Smith-Waterman1 version - Latest release: 16 days ago - 0 downloads total - 1 maintainer
rustalign-io 0.2.0
Ultrafast DNA sequence aligner using FM-index and Smith-Waterman1 version - Latest release: 16 days ago - 0 downloads total - 1 maintainer
rustalign-common 0.2.0
Ultrafast DNA sequence aligner using FM-index and Smith-Waterman1 version - Latest release: 16 days ago - 0 downloads total - 1 maintainer
rustalign-concurrency 0.2.0
Ultrafast DNA sequence aligner using FM-index and Smith-Waterman1 version - Latest release: 16 days ago - 0 downloads total - 1 maintainer
rustalign-aligner 0.2.0
Ultrafast DNA sequence aligner using FM-index and Smith-Waterman1 version - Latest release: 16 days ago - 0 downloads total - 1 maintainer
alass-core 2.0.0
Automatic Language-Agnostic Subtitle Synchronization (Library)4 versions - Latest release: over 6 years ago - 3 dependent packages - 2 dependent repositories - 10.8 thousand downloads total - 1,238 stars on GitHub - 1 maintainer
nanocount 0.1.1
A dual-guide protospacer counter for long-read nanopore data2 versions - Latest release: about 2 months ago - 31 downloads total - 1 maintainer
taalika 💰
Plain text tables, aligned automatically (fork of tabular)2 versions - Latest release: about 2 months ago - 2.28 thousand downloads total - 5 stars on GitHub - 1 maintainer
cyanea-align 0.1.0
Sequence alignment algorithms for the Cyanea bioinformatics ecosystem1 version - Latest release: 17 days ago - 0 downloads total - 1 maintainer
edit_tree 0.2.1
Edit trees in rust.5 versions - Latest release: over 3 years ago - 4 dependent packages - 1 dependent repositories - 13.3 thousand downloads total - 5 stars on GitHub - 1 maintainer
egui_alignments 0.3.7
Simple alignment tools for egui15 versions - Latest release: about 2 months ago - 12.5 thousand downloads total - 9 stars on GitHub - 1 maintainer
rasusa 2.2.2
Randomly subsample reads or alignments18 versions - Latest release: 6 months ago - 19 thousand downloads total - 249 stars on GitHub - 1 maintainer
Top 7.7% on crates.io
14 versions - Latest release: 3 months ago - 18 dependent packages - 764 dependent repositories - 6.87 million downloads total - 33 stars on GitHub - 2 maintainers
aligned 0.4.3
A newtype with alignment of at least `A` bytes14 versions - Latest release: 3 months ago - 18 dependent packages - 764 dependent repositories - 6.87 million downloads total - 33 stars on GitHub - 2 maintainers
align-data 0.1.0
Simply increase the alignment of any statics or include_bytes!1 version - Latest release: over 5 years ago - 7 dependent packages - 15 dependent repositories - 122 thousand downloads total - 1 stars on GitHub - 1 maintainer
aligners 0.0.10
Utilities for alignment guarantees for data.10 versions - Latest release: over 3 years ago - 3 dependent packages - 1 dependent repositories - 20.4 thousand downloads total - 1 stars on GitHub - 1 maintainer
parasailors 0.3.1
SIMD accelerated pairwise genetic sequence alignment.11 versions - Latest release: over 9 years ago - 2 dependent packages - 1 dependent repositories - 30.7 thousand downloads total - 21 stars on GitHub - 1 maintainer
cursive-aligned-view 0.7.0
A view wrapper for gyscos/cursive views which aligns child views14 versions - Latest release: over 1 year ago - 8 dependent packages - 8 dependent repositories - 54.1 thousand downloads total - 18 stars on GitHub - 2 maintainers
segul 0.22.1
An ultrafast and memory-efficient tool for phylogenomics61 versions - Latest release: over 1 year ago - 1 dependent package - 73 thousand downloads total - 13 stars on GitHub - 1 maintainer
aligned_box 0.3.0
Allocate heap memory with user-specified alignment4 versions - Latest release: almost 2 years ago - 1 dependent package - 1 dependent repositories - 16.1 thousand downloads total - 3 stars on GitHub - 1 maintainer
libparasail-sys 0.2.0
Unsafe Rust bindings for the parasail C library14 versions - Latest release: 2 months ago - 1 dependent package - 18.9 thousand downloads total - 2 stars on GitHub - 1 maintainer
zero-copy-pads 0.2.0 💰
Padding/aligning values without heap allocation10 versions - Latest release: almost 5 years ago - 1 dependent package - 3 dependent repositories - 34.7 thousand downloads total - 5 stars on GitHub - 1 maintainer
bsalign_sys 0.7.0
Rust bindings for the bsalign C library15 versions - Latest release: 6 months ago - 8.08 thousand downloads total - 3 stars on GitHub - 1 maintainer
shader-types 0.2.2
Vector and Matrix types that are properly aligned for use in std140 uniforms4 versions - Latest release: over 5 years ago - 1 dependent repositories - 5.59 thousand downloads total - 5 stars on GitHub - 1 maintainer
parasail-sys 0.2.5
Native bindings to the parasail pairwise genetic sequence alignment library.7 versions - Latest release: about 10 years ago - 1 dependent package - 19.8 thousand downloads total - 21 stars on GitHub - 1 maintainer
parasail-rs 0.9.0
Rust bindings and wrapper for parasail, a SIMD C library for pairwise sequence alignment.23 versions - Latest release: about 2 months ago - 25.2 thousand downloads total - 2 stars on GitHub - 1 maintainer
aligner 0.1.6
Automatically corrects subtitle timings given a second correct subtitle7 versions - Latest release: over 8 years ago - 13.3 thousand downloads total - 1,213 stars on GitHub - 1 maintainer
Top 8.7% on crates.io
4 versions - Latest release: over 1 year ago - 7 dependent packages - 4 dependent repositories - 419 thousand downloads total - 18 stars on GitHub - 1 maintainer
elain 0.3.1
Set a type's minimum alignment with const generics.4 versions - Latest release: over 1 year ago - 7 dependent packages - 4 dependent repositories - 419 thousand downloads total - 18 stars on GitHub - 1 maintainer
cramino 0.9.0
A tool to quickly extract quality metrics from bam or cram files1 version - Latest release: over 3 years ago - 1.75 thousand downloads total - 163 stars on GitHub - 1 maintainer
cargo-align 0.1.2
A simple tool for aligning code.3 versions - Latest release: over 1 year ago - 3.4 thousand downloads total - 1 stars on GitHub - 1 maintainer
alignment-exporter 0.1.3
Proc macro providing alignment info for a user-defined struct.4 versions - Latest release: over 1 year ago - 4.33 thousand downloads total - 0 stars on GitHub - 1 maintainer
alinio 0.2.1
A library to assist in alignment and table generation in TUI applications4 versions - Latest release: about 4 years ago - 10.6 thousand downloads total - 8 stars on GitHub - 1 maintainer
Top 7.2% on crates.io
6 versions - Latest release: about 4 years ago - 32 dependent packages - 661 dependent repositories - 2.25 million downloads total - 38 stars on GitHub - 2 maintainers
tabular 0.2.0
Plain text tables, aligned automatically6 versions - Latest release: about 4 years ago - 32 dependent packages - 661 dependent repositories - 2.25 million downloads total - 38 stars on GitHub - 2 maintainers
multi-seq-align 0.2.0
Manipulate multiple sequence alignments (DNA/protein).2 versions - Latest release: over 5 years ago - 2.99 thousand downloads total - 4 stars on GitHub - 1 maintainer
addr_align 0.1.0
A crate for aligning values (usually some kind of address) to a specified boundary1 version - Latest release: almost 2 years ago - 2.68 thousand downloads total - 0 stars on GitHub - 1 maintainer
colprint 0.0.0
A lightweight macro for neatly printing data in aligned columns with automatic width calculation ...1 version - Latest release: 10 months ago - 658 downloads total - 1 stars on GitHub - 1 maintainer
sigalign 0.4.1
A Similarity-Guided Alignment Algorithm11 versions - Latest release: 10 months ago - 13 thousand downloads total - 27 stars on GitHub - 1 maintainer
align3d 1.0.3
Alignment with Iterative Closest Point (ICP) for point clouds and images4 versions - Latest release: about 2 years ago - 5.7 thousand downloads total - 11 stars on GitHub - 1 maintainer
ska 0.5.1
Split k-mer analysis24 versions - Latest release: 2 months ago - 1 dependent repositories - 26.8 thousand downloads total - 96 stars on GitHub - 1 maintainer
align_text 1.0.0
Aligns lines in a block of text within a number of columns.1 version - Latest release: over 2 years ago - 1.73 thousand downloads total - 8 stars on GitHub - 1 maintainer
aligned-array 1.0.1
A newtype with alignment of at least `A` bytes2 versions - Latest release: about 5 years ago - 6 dependent packages - 17 dependent repositories - 3.35 million downloads total - 1 stars on GitHub - 1 maintainer
smith_waterman 0.1.1
The Smith–Waterman algorithm performs local sequence alignment.3 versions - Latest release: over 8 years ago - 6.18 thousand downloads total - 0 stars on GitHub - 1 maintainer
psdm 0.3.0
Compute a pairwise SNP distance matrix from one or two alignment(s)3 versions - Latest release: over 1 year ago - 3.89 thousand downloads total - 25 stars on GitHub - 1 maintainer
sweepga 0.1.1
Efficient pangenome alignment filtering and sparsification tool2 versions - Latest release: 4 months ago - 69 downloads total - 14 stars on GitHub - 1 maintainer
spoa_rs 0.1.0
Rust bindings for SPOA (SIMD POA)1 version - Latest release: 9 months ago - 523 downloads total - 0 stars on GitHub - 1 maintainer
jean_alignment 0.1.0
Sequence alignment feature for jean1 version - Latest release: over 3 years ago - 1 dependent package - 1 dependent repositories - 2.08 thousand downloads total - 5 stars on GitHub - 1 maintainer
minimap2-temp 0.1.33+minimap2.2.28
Bindings to libminimap24 versions - Latest release: 9 months ago - 3.71 thousand downloads total - 105 stars on GitHub - 1 maintainer
align-address 0.4.0
Functions for aligning addresses.4 versions - Latest release: about 1 month ago - 4 dependent packages - 1 dependent repositories - 144 thousand downloads total - 0 stars on GitHub - 1 maintainer
aloe-simd-core 0.1.1 removed
A high-performance SIMD core library for Rust, enabling efficient vectorized operations with alig...1 version - Latest release: 11 months ago - 546 downloads total - 11 stars on GitHub - 1 maintainer
align-rs removed
Utilities for alignment guarantees for data.1 version - Latest release: 9 months ago - 1.1 thousand downloads total - 1 stars on GitHub - 1 maintainer
Related Keywords
bioinformatics
37
rust
21
sequence
11
genomics
11
simd
11
dna
10
aligned
10
ffi
9
sequencing
9
align
9
sequence-alignment
8
fm-index
7
fasta
6
minimap2
5
fastq
4
terminal
4
algorithm
4
protein
4
layout
4
cli
4
text
4
formatting
4
tool
4
ngs
4
api
3
automatic
3
subtitle
3
bam
3
long-read
3
incorrect-subtitles
3
longread
3
spliced-alignment
3
array
3
static
3
seqan2
3
tables
3
padding
3
read-mapping
3
yara
3
pairwise
3
snp
2
address
2
smith-waterman
2
memory
2
byte
2
tui
2
parasail
2
string
2
format
2
msa
2
biology
2
allocation
2
box
2
packing
2
semantic-similarity
2
ontology
2
struct
2
bsalign
2
unicode
2
poa
2
no-std
2
similarity
2
distance
2
tree-matching
2
multi-sequences-alignment
2
pairwise-alignment
2
sequence-aligner
2
seqan
2
rustlang
1
sequence-alignments
1
evolution
1
cargo
1
cram
1
command-line-tool
1
phylogenetics
1
heap
1
aligned-allocations
1
ffi-bindings
1
column
1
zero-copy
1
crates
1
shaders
1
std140
1
graphics
1
gamedev
1
aligner
1
const
1
const-generics
1
ont
1
pacbio
1
output-formatting
1
rust-lang
1
text-tools
1
waterman
1
smith
1
matrix
1
filtering
1
pangenome
1
consensus
1
spoa
1