Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
hub.docker.com "nextflow" keyword
Top 1.7% on hub.docker.com
1 version - Latest release: almost 2 years ago - 576 downloads total - 83 stars on GitHub
nfcore/test-datasets rnafusion
This contains docker images for nf-core/test-datasets1 version - Latest release: almost 2 years ago - 576 downloads total - 83 stars on GitHub
Top 1.1% on hub.docker.com
3 versions - Latest release: over 3 years ago - 5.44 thousand downloads total - 32 stars on GitHub
nfcore/proteomicslfq 1.0.0
A Docker Container for label free quantification for proteomics data.3 versions - Latest release: over 3 years ago - 5.44 thousand downloads total - 32 stars on GitHub
Top 1.6% on hub.docker.com
4 versions - Latest release: about 3 years ago - 7.71 thousand downloads total - 113 stars on GitHub
nfcore/scrnaseq 1.1.0
A Docker Container for the nf-core/scrnaseq pipeline.4 versions - Latest release: about 3 years ago - 7.71 thousand downloads total - 113 stars on GitHub
Top 1.6% on hub.docker.com
2 versions - Latest release: over 5 years ago - 965 downloads total - 4 stars on GitHub
nfcore/ddamsproteomics dev
A Docker image for the nf-core/ddamsproteomics pipeline.2 versions - Latest release: over 5 years ago - 965 downloads total - 4 stars on GitHub
Top 1.5% on hub.docker.com
3 versions - Latest release: almost 2 years ago - 1.17 thousand downloads total - 10 stars on GitHub
nfcore/mnaseseq 1.0.0
A Docker container for the nf-core/mnaseseq pipeline.3 versions - Latest release: almost 2 years ago - 1.17 thousand downloads total - 10 stars on GitHub
Top 0.5% on hub.docker.com
9 versions - Latest release: over 4 years ago - 660 thousand downloads total - 751 stars on GitHub
nfcore/rnaseq 1.4.2
Docker Image for nf-core/rnaseq project.9 versions - Latest release: over 4 years ago - 660 thousand downloads total - 751 stars on GitHub
Top 1.1% on hub.docker.com
16 versions - Latest release: over 3 years ago - 5.95 thousand downloads total - 29 stars on GitHub
nfcore/mhcquant 1.6.0
A Docker image for nf-core/mhcquant16 versions - Latest release: over 3 years ago - 5.95 thousand downloads total - 29 stars on GitHub
Top 0.5% on hub.docker.com
10 versions - Latest release: almost 2 years ago - 1.06 million downloads total - 294 stars on GitHub
nfcore/sarek 2.7.2
A Docker container for the nf-core/sarek pipeline10 versions - Latest release: almost 2 years ago - 1.06 million downloads total - 294 stars on GitHub
Top 1.1% on hub.docker.com
3 versions - Latest release: about 3 years ago - 5.58 thousand downloads total - 17 stars on GitHub
nfcore/clipseq 1.0.0
CLIP sequencing analysis pipeline for QC, pre-mapping, genome mapping, UMI deduplication, and mul...3 versions - Latest release: about 3 years ago - 5.58 thousand downloads total - 17 stars on GitHub
Top 1.5% on hub.docker.com
2 versions - Latest release: over 5 years ago - 1.16 thousand downloads total - 14 stars on GitHub
nfcore/exoseq dev
A docker container for the ExoSeq pipeline2 versions - Latest release: over 5 years ago - 1.16 thousand downloads total - 14 stars on GitHub
Top 1.4% on hub.docker.com
5 versions - Latest release: over 1 year ago - 1.89 thousand downloads total - 8 stars on GitHub
nfcore/coproid 1.1.1
A Docker image for the nf-core/coproid pipeline.5 versions - Latest release: over 1 year ago - 1.89 thousand downloads total - 8 stars on GitHub
Top 1.1% on hub.docker.com
9 versions - Latest release: about 3 years ago - 6.26 thousand downloads total - 12 stars on GitHub
nfcore/diaproteomics 1.2.4
A Docker container for nf-core/diaproteomics9 versions - Latest release: about 3 years ago - 6.26 thousand downloads total - 12 stars on GitHub
Top 0.3% on hub.docker.com
30 versions - Latest release: 2 months ago - 1 dependent repositories - 41.7 thousand downloads total - 122 stars on GitHub
nfcore/eager 2.5.1
A Docker image for the nf-core/eager pipeline.30 versions - Latest release: 2 months ago - 1 dependent repositories - 41.7 thousand downloads total - 122 stars on GitHub
Top 0.8% on hub.docker.com
4 versions - Latest release: almost 3 years ago - 41.7 thousand downloads total - 64 stars on GitHub
nfcore/smrnaseq 1.1.0
A Docker container for the nf-core/smrnaseq pipeline.4 versions - Latest release: almost 3 years ago - 41.7 thousand downloads total - 64 stars on GitHub
Top 1.4% on hub.docker.com
3 versions - Latest release: over 4 years ago - 1.31 thousand downloads total - 4 stars on GitHub
nfcore/neutronstar 1.0.0
A Docker Container for nf-core/neutronstar3 versions - Latest release: over 4 years ago - 1.31 thousand downloads total - 4 stars on GitHub
Top 1.6% on hub.docker.com
2 versions - Latest release: over 4 years ago - 950 downloads total - 6 stars on GitHub
nfcore/denovohybrid dev
A Docker Image for the nf-core/denovohybrid pipeline2 versions - Latest release: over 4 years ago - 950 downloads total - 6 stars on GitHub
Top 1.2% on hub.docker.com
5 versions - Latest release: over 3 years ago - 3.39 thousand downloads total - 50 stars on GitHub
nfcore/bacass 1.1.1
A Docker container for the nf-core/bacass pipeline.5 versions - Latest release: over 3 years ago - 3.39 thousand downloads total - 50 stars on GitHub
nfcore/crisprvar
A Docker container for the nf-core/crisprvar pipelineLatest release: about 1 month ago - 0 downloads total - 5 stars on GitHub
Top 1.7% on hub.docker.com
2 versions - Latest release: over 5 years ago - 566 downloads total - 14 stars on GitHub
nfcore/vipr latest
A docker container for VIPR2 versions - Latest release: over 5 years ago - 566 downloads total - 14 stars on GitHub
Top 0.8% on hub.docker.com
2 versions - Latest release: about 3 years ago - 21.8 thousand downloads total - 18 stars on GitHub
nfcore/kmermaid dev
A Docker container for the nf-core/kmermaid pipelin2 versions - Latest release: about 3 years ago - 21.8 thousand downloads total - 18 stars on GitHub
Top 1.2% on hub.docker.com
5 versions - Latest release: over 4 years ago - 2.6 thousand downloads total - 35 stars on GitHub
nfcore/bcellmagic 1.2.0
A preliminary container for the bcellmagic pipeline5 versions - Latest release: over 4 years ago - 2.6 thousand downloads total - 35 stars on GitHub
Top 1.3% on hub.docker.com
3 versions - Latest release: almost 4 years ago - 31.4 thousand downloads total - 4 stars on GitHub
nfcore/slamseq 1.0.0
A docker image for nf-core/slamseq3 versions - Latest release: almost 4 years ago - 31.4 thousand downloads total - 4 stars on GitHub
Top 1.5% on hub.docker.com
2 versions - Latest release: over 5 years ago - 1.15 thousand downloads total - 28 stars on GitHub
nfcore/lncpipe dev
A Docker image for nf-core/lncpipe2 versions - Latest release: over 5 years ago - 1.15 thousand downloads total - 28 stars on GitHub
Top 2.2% on hub.docker.com
2 versions - Latest release: about 3 years ago - 1.73 thousand downloads total - 15 stars on GitHub
nfcore/smartseq2 dev
A docker container for the nf-core/smartseq2 pipeline.2 versions - Latest release: about 3 years ago - 1.73 thousand downloads total - 15 stars on GitHub
Top 1.2% on hub.docker.com
4 versions - Latest release: over 3 years ago - 3.92 thousand downloads total - 27 stars on GitHub
nfcore/epitopeprediction 1.1.0
A docker image for nf-core/epitopeprediction4 versions - Latest release: over 3 years ago - 3.92 thousand downloads total - 27 stars on GitHub
Top 1.2% on hub.docker.com
3 versions - Latest release: over 5 years ago - 3.75 thousand downloads total - 40 stars on GitHub
nfcore/deepvariant dev
A Docker image for the nf-core/deepvariant pipeline.3 versions - Latest release: over 5 years ago - 3.75 thousand downloads total - 40 stars on GitHub
Related Keywords
nf-core
26
workflow
26
pipeline
24
variant-calling
4
proteomics
4
genome-assembly
4
openms
3
denovo-assembly
3
adna
2
assembly
2
denovo
2
hybrid-assembly
2
nanopore
2
nanopore-sequencing
2
metagenomics
2
genomics
2
bioinformatics
2
rna
2
differential-expression
2
10xgenomics
2
10x-genomics
2
rna-seq
2
transcriptomics
1
viral
1
rna-seq-analysis
1
bacterial-genomes
1
ngs-pipeline
1
transcriptome
1
epitope
1
epitope-prediction
1
supernova
1
mhc-binding-prediction
1
linked-reads
1
deep-variant
1
dna
1
smrna-seq
1
small-rna
1
population-genetics
1
pathogen-genomics
1
google
1
slamseq
1
quantseq
1
lncrna
1
repseq
1
long-non-coding
1
immunorepertoire
1
immcantation
1
b-cell
1
airr
1
kmer-frequency-count
1
kmer-counting
1
kmer
1
k-mer
1
non-coding
1
viruses
1
virus
1
viral-ngs
1
viral-metagenomics
1
viral-genomics
1
containers
1
conda
1
cancer
1
annotation
1
peptides
1
mhc
1
mass-spectrometry
1
nucleosome-positioning
1
nucleosome-maps
1
nucleosome
1
mnase-seq
1
shotgun-ms
1
star-solo
1
single-cell
1
kallisto
1
cellranger
1
bustools
1
alevin
1
label-free-quantification
1
testing
1
test-datasets
1
test-data
1
pipelines
1
genome
1
ancientdna
1
ancient-dna-analysis
1
dia-proteomics
1
data-independent-proteomics
1
microbiome
1
coprolite
1
ancient-dna
1
exome-sequencing
1
exome
1
rna-rbp-interactions
1
peak-calling
1
clip-seq
1
clip
1
whole-genome-sequencing
1
whole-exome-sequencing
1
target-panels
1
somatic
1