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An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

hub.docker.com namespaces: biocontainers

View the packages within the biocontainers namespace on the hub.docker.com package registry, including their maintainers and dependencies.

Top 1.5% on hub.docker.com
biocontainers/ecopcr v1.0.1dfsg-1-deb_cv1
2 versions - Latest release: over 6 years ago - 8.47 thousand downloads total
Top 1.4% on hub.docker.com
biocontainers/pbconsensuscore v1.1.1dfsg-1-deb-py3_cv1
4 versions - Latest release: over 6 years ago - 15.6 thousand downloads total
Top 3.4% on hub.docker.com
biocontainers/python-pbcore v1.2.11dfsg-1-deb_cv1
1 version - Latest release: almost 8 years ago - 436 downloads total
Top 1.5% on hub.docker.com
biocontainers/dwgsim v0.1.12-2-deb_cv1
2 versions - Latest release: over 6 years ago - 9.44 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/ipig v0.0.r5-3-deb_cv1
2 versions - Latest release: over 6 years ago - 7.94 thousand downloads total
Top 3.2% on hub.docker.com
biocontainers/zorro v1.0.0_cv2
2 versions - Latest release: about 7 years ago - 200 downloads total
Top 1.5% on hub.docker.com
biocontainers/percolator v3.0_cv4
Semi-supervised learning for peptide identification from shotgun proteomics datasets
4 versions - Latest release: about 7 years ago - 1.07 thousand downloads total - 634 stars on GitHub
Top 1.5% on hub.docker.com
biocontainers/unanimity v3.3.0dfsg-2.1-deb_cv1
1 version - Latest release: over 6 years ago - 9.33 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/populations v1.2.33svn0120106dfsg-2-deb_cv1
1 version - Latest release: over 6 years ago - 7.74 thousand downloads total
Top 3.2% on hub.docker.com
biocontainers/dna-jellyfish v2.2.6-1b1-deb-py3_cv1
1 version - Latest release: over 7 years ago - 483 downloads total
Top 1.6% on hub.docker.com
biocontainers/pbsuite v15.8.24dfsg-3-deb_cv1
2 versions - Latest release: over 6 years ago - 7.6 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/pbbanana v15.8.24dfsg-3-deb-py2_cv1
2 versions - Latest release: over 6 years ago - 7.98 thousand downloads total
Top 1.2% on hub.docker.com
biocontainers/cutadapt v1.18-1-deb-py3_cv1
6 versions - Latest release: over 6 years ago - 26.5 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/pymummer v0.10.3-2-deb-py3_cv1
2 versions - Latest release: over 6 years ago - 8.11 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/pixelmed-apps v20150917git20151209.36f3174dfsg-1-deb_cv1
2 versions - Latest release: over 6 years ago - 7.61 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/wigeon v20101212dfsg1-2-deb_cv1
2 versions - Latest release: over 6 years ago - 7.46 thousand downloads total
Top 1.4% on hub.docker.com
biocontainers/pbh5tools v0.8.0git20170929.58d54ffdfsg-1-deb-py2_cv1
4 versions - Latest release: over 6 years ago - 15.6 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/sphinxcontrib-autoprogram v0.1.5-1-deb_cv1
2 versions - Latest release: over 6 years ago - 7.93 thousand downloads total
Top 1.5% on hub.docker.com
biocontainers/elph v1.0.1-2-deb_cv1
1 version - Latest release: over 6 years ago - 8.72 thousand downloads total
Top 3.2% on hub.docker.com
biocontainers/yaha v0.1.83-1-deb_cv1
1 version - Latest release: over 6 years ago - 466 downloads total
Top 1.5% on hub.docker.com
biocontainers/bolt-lmm-example v2.3.2dfsg-3-deb_cv1
1 version - Latest release: over 6 years ago - 8.95 thousand downloads total
Top 6.1% on hub.docker.com
biocontainers/stocsy phenomenal-v0.1.9_cv0.3.2.1
1 version - Latest release: about 8 years ago - 33 downloads total
Top 1.6% on hub.docker.com
biocontainers/pirs v2.0.2dfsg-8-deb_cv1
2 versions - Latest release: over 6 years ago - 8.1 thousand downloads total
Top 1.5% on hub.docker.com
biocontainers/cnvkit v0.9.5-3-deb_cv1
1 version - Latest release: over 6 years ago - 9.69 thousand downloads total
Top 3.4% on hub.docker.com
biocontainers/python3-fast5 v0.5.8-1b2-deb_cv1
1 version - Latest release: almost 8 years ago - 431 downloads total
Top 1.5% on hub.docker.com
biocontainers/clonalorigin v1.0-3-deb_cv1
1 version - Latest release: over 6 years ago - 8.83 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/profisis v1.0.11-5-deb_cv1
2 versions - Latest release: over 6 years ago - 7.48 thousand downloads total
Top 6.1% on hub.docker.com
biocontainers/python-burrito v0.9.1-1-deb_cv1
1 version - Latest release: almost 8 years ago - 37 downloads total
Top 1.6% on hub.docker.com
biocontainers/prime-phylo v1.0.11-7b1-deb_cv1
2 versions - Latest release: over 6 years ago - 7.5 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/pilon v1.23dfsg-1-deb_cv1
3 versions - Latest release: over 6 years ago - 8.52 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/metaphlan2 v2.7.8-1-deb_cv1
2 versions - Latest release: over 6 years ago - 8.05 thousand downloads total
Top 3.4% on hub.docker.com
biocontainers/bioconductor-genomeinfodb v1.10.3-1-deb_cv1
1 version - Latest release: over 7 years ago - 150 downloads total
Top 1.5% on hub.docker.com
biocontainers/biopython-sql v1.73dfsg-1-deb-py3_cv1
2 versions - Latest release: over 6 years ago - 9.71 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/primer3 v2.4.0-2-deb_cv1
2 versions - Latest release: over 6 years ago - 8.08 thousand downloads total
Top 1.5% on hub.docker.com
biocontainers/dialign-tx v1.0.2-12-deb_cv1
2 versions - Latest release: over 6 years ago - 8.84 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/lagan v2.0-3-deb_cv1
2 versions - Latest release: over 6 years ago - 8.34 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/ray-extra v2.3.1-6-deb_cv1
2 versions - Latest release: over 6 years ago - 7.5 thousand downloads total
Top 1.5% on hub.docker.com
biocontainers/cassiopee v1.0.9-2-deb_cv1
2 versions - Latest release: over 6 years ago - 8.86 thousand downloads total
Top 3.3% on hub.docker.com
biocontainers/bioconductor-ebseq v1.14.0-1-deb_cv1
1 version - Latest release: over 7 years ago - 161 downloads total
biocontainers/allpathslg
whole‐genome shotgun assembler that can generate high‐quality genome assemblies using short reads
Latest release: 15 days ago - 3 downloads total - 620 stars on GitHub
Top 1.6% on hub.docker.com
biocontainers/hhsuite v3.0beta3dfsg-3-deb_cv1
2 versions - Latest release: over 6 years ago - 8.13 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/ncbi-epcr v2.3.12-1-7-deb_cv1
2 versions - Latest release: over 6 years ago - 7.96 thousand downloads total
Top 1.5% on hub.docker.com
biocontainers/bali-phy v3.4dfsg-1-deb_cv1
1 version - Latest release: over 6 years ago - 9.71 thousand downloads total
Top 1.3% on hub.docker.com
biocontainers/cyvcf2 v0.10.4-1-deb-py3_cv1
2 versions - Latest release: over 6 years ago - 17.1 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/scoary v1.6.16-1-deb_cv1
2 versions - Latest release: over 6 years ago - 7.49 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/rapmap-dev v0.12.0dfsg-3-deb_cv1
1 version - Latest release: over 6 years ago - 7.39 thousand downloads total
Top 1.3% on hub.docker.com
biocontainers/trimmomatic v0.38dfsg-1-deb_cv1
2 versions - Latest release: over 6 years ago - 22.3 thousand downloads total
Top 1.5% on hub.docker.com
biocontainers/ball v1.5.0git20180813.37fc53c-3-deb-py2_cv1
2 versions - Latest release: over 6 years ago - 9.84 thousand downloads total
Top 1.5% on hub.docker.com
biocontainers/gdcm v2.8.8-9-deb-py3_cv1
2 versions - Latest release: over 6 years ago - 8.85 thousand downloads total
Top 1.8% on hub.docker.com
biocontainers/ccmetagen v1.1.5_cv1
1 version - Latest release: almost 6 years ago - 3.73 thousand downloads total
Top 1.2% on hub.docker.com
biocontainers/eido 0.1.9_cv2
4 versions - Latest release: over 3 years ago - 29.6 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/invesalius-bin v3.1.99992-3-deb_cv1
2 versions - Latest release: over 6 years ago - 8.31 thousand downloads total
Top 4.9% on hub.docker.com
biocontainers/python-biopython-sql v1.68dfsg-3-deb_cv1
1 version - Latest release: almost 8 years ago - 51 downloads total
Top 2.5% on hub.docker.com
biocontainers/jenkins_spec_check latest
1 version - Latest release: almost 5 years ago - 10.7 thousand downloads total
Top 2.3% on hub.docker.com
biocontainers/ipo develop
A Tool for automated Optimization of XCMS Parameters
3 versions - Latest release: over 7 years ago - 1.06 thousand downloads total - 1 stars on GitHub
Top 1.5% on hub.docker.com
biocontainers/e-mem v1.0.1-2-deb_cv1
1 version - Latest release: over 6 years ago - 8.74 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/pyqi v0.3.2dfsg-3-deb_cv1
2 versions - Latest release: over 6 years ago - 7.47 thousand downloads total
biocontainers/megahit 1.2.9_cv1
1 version - Latest release: over 2 years ago - 593 downloads total
Top 5.1% on hub.docker.com
biocontainers/ecomet phenomenal-v1.1_cv0.3.39
1 version - Latest release: over 7 years ago - 100 downloads total
Top 1.6% on hub.docker.com
biocontainers/mira-assembler v4.9.6-4b1-deb_cv1
2 versions - Latest release: over 6 years ago - 7.7 thousand downloads total
Top 5.2% on hub.docker.com
biocontainers/python-pbcommand v0.5.3-1-deb_cv1
1 version - Latest release: almost 8 years ago - 41 downloads total
Top 1.5% on hub.docker.com
biocontainers/anfo v0.98-7-deb_cv1
2 versions - Latest release: over 6 years ago - 9.87 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/relion-bin-plusmpi v1.4dfsg-4-deb_cv1
2 versions - Latest release: over 6 years ago - 7.52 thousand downloads total
Top 1.4% on hub.docker.com
biocontainers/fastp v0.20.1_cv1
2 versions - Latest release: over 5 years ago - 26.4 thousand downloads total
Top 3.0% on hub.docker.com
biocontainers/gapcloser v1.12-r6_cv3
3 versions - Latest release: over 6 years ago - 290 downloads total
Top 1.5% on hub.docker.com
biocontainers/bart v0.4.04-2-deb_cv1
2 versions - Latest release: over 6 years ago - 9.51 thousand downloads total
Top 4.8% on hub.docker.com
biocontainers/python-fast5 v0.5.8-1b2-deb_cv1
1 version - Latest release: almost 8 years ago - 53 downloads total
Top 1.5% on hub.docker.com
biocontainers/dicom3tools v1.0020180803063840-1-deb_cv1
2 versions - Latest release: over 6 years ago - 8.46 thousand downloads total
Top 1.5% on hub.docker.com
biocontainers/ctdopts v1.2-3-deb-py3_cv1
2 versions - Latest release: over 6 years ago - 8.9 thousand downloads total
Top 1.5% on hub.docker.com
biocontainers/gentle v1.9cvs20100605dfsg1-7b1-deb_cv1
2 versions - Latest release: over 6 years ago - 8.52 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/perlprimer v1.2.4-1-deb_cv1
2 versions - Latest release: over 6 years ago - 7.66 thousand downloads total
Top 1.9% on hub.docker.com
biocontainers/pepnovop 20120423
de novo sequencing of low precision MS/MS data
1 version - Latest release: almost 8 years ago - 272 downloads total - 634 stars on GitHub
Top 1.5% on hub.docker.com
biocontainers/hisat2 v2.1.0-2-deb_cv1
2 versions - Latest release: over 6 years ago - 16.5 thousand downloads total
Top 3.9% on hub.docker.com
biocontainers/epigrass v2.4.7-1-deb_cv1
1 version - Latest release: almost 8 years ago - 94 downloads total
Top 1.5% on hub.docker.com
biocontainers/colormath v3.0.0-1-deb-py3_cv1
1 version - Latest release: over 6 years ago - 8.45 thousand downloads total
Top 1.5% on hub.docker.com
biocontainers/clustalo v1.2.4-2-deb_cv1
2 versions - Latest release: over 6 years ago - 11.3 thousand downloads total
Top 1.5% on hub.docker.com
biocontainers/amide v1.0.5-12b1-deb_cv1
2 versions - Latest release: over 6 years ago - 9.95 thousand downloads total
Top 1.3% on hub.docker.com
biocontainers/proteinprophet v201510131012_cv4
Protein inference for MS/MS analysis
4 versions - Latest release: over 6 years ago - 1.93 thousand downloads total - 634 stars on GitHub
Top 1.6% on hub.docker.com
biocontainers/unicycler-data v0.4.7dfsg-2-deb_cv1
2 versions - Latest release: over 6 years ago - 7.92 thousand downloads total
Top 1.5% on hub.docker.com
biocontainers/ampliconnoise v1.29-8-deb_cv1
2 versions - Latest release: over 6 years ago - 9.46 thousand downloads total
biocontainers/pia-web-server
Web server for PIA - Protein Inference Algorithms
Latest release: 20 days ago - 1 downloads total - 620 stars on GitHub
Top 1.5% on hub.docker.com
biocontainers/dicomscope v3.6.0-20-deb_cv1
2 versions - Latest release: over 6 years ago - 8.44 thousand downloads total
Top 1.5% on hub.docker.com
biocontainers/proteowizard v3_0_9740_cv2
tools and software libraries that facilitate proteomics data analysis
3 versions - Latest release: about 7 years ago - 717 downloads total - 634 stars on GitHub
Top 1.6% on hub.docker.com
biocontainers/parsnp v1.2dfsg-5-deb_cv1
2 versions - Latest release: over 6 years ago - 7.63 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/paleomix v1.2.13.3-1-deb_cv1
1 version - Latest release: over 6 years ago - 7.53 thousand downloads total
Top 1.5% on hub.docker.com
biocontainers/edfbrowser v1.67dfsg-1-deb_cv1
2 versions - Latest release: over 6 years ago - 8.44 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/norsnet v1.0.17-4-deb_cv1
2 versions - Latest release: over 6 years ago - 7.57 thousand downloads total
Top 2.2% on hub.docker.com
biocontainers/nanosv v1.2.4_cv1
1 version - Latest release: almost 5 years ago - 1.28 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/mptp v0.2.4-1-deb_cv1
1 version - Latest release: over 6 years ago - 7.95 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/profnet-isis v1.0.22-6-deb_cv1
2 versions - Latest release: over 6 years ago - 7.89 thousand downloads total
Top 1.3% on hub.docker.com
biocontainers/pysam v0.15.2ds-2-deb-py3_cv1
4 versions - Latest release: over 6 years ago - 19.1 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/sortmerna v2.1-3-deb_cv1
2 versions - Latest release: over 6 years ago - 7.65 thousand downloads total
Top 3.0% on hub.docker.com
biocontainers/bioconductor-mergeomics v1.2.0-1-deb_cv1
1 version - Latest release: over 7 years ago - 534 downloads total
Top 1.6% on hub.docker.com
biocontainers/probcons-extra v1.12-12-deb_cv1
2 versions - Latest release: over 6 years ago - 7.88 thousand downloads total
Top 1.5% on hub.docker.com
biocontainers/circlator v1.5.5-3-deb_cv1
2 versions - Latest release: over 6 years ago - 8.64 thousand downloads total
Top 3.4% on hub.docker.com
biocontainers/python-matplotlib-venn v0.11.5-1-deb_cv1
1 version - Latest release: almost 8 years ago - 429 downloads total
Top 1.5% on hub.docker.com
biocontainers/dnaclust v3-6b1-deb_cv1
2 versions - Latest release: over 6 years ago - 8.45 thousand downloads total
Top 3.2% on hub.docker.com
biocontainers/predictprotein v1.1.07-2-deb_cv1
1 version - Latest release: almost 8 years ago - 485 downloads total
Top 3.4% on hub.docker.com
biocontainers/bioconductor-annotationdbi v1.36.1-2-deb_cv1
1 version - Latest release: over 7 years ago - 152 downloads total
Top 1.6% on hub.docker.com
biocontainers/pybedtools-bin v0.8.0-1-deb_cv1
1 version - Latest release: over 6 years ago - 7.85 thousand downloads total