Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

hub.docker.com namespaces: biocontainers

Top 3.3% on hub.docker.com
biocontainers/ddi-web-app latest
OmicsDI Web Application is a web page to index omics datasets
1 version - Latest release: over 7 years ago - 154 downloads total
Top 0.3% on hub.docker.com
biocontainers/bcftools 1.3.1
variant calling and manipulating VCFs and BCFs
8 versions - Latest release: over 6 years ago - 1 dependent repositories - 1.03 million downloads total - 634 stars on GitHub
Top 6.1% on hub.docker.com
biocontainers/stocsy phenomenal-v0.1.9_cv0.3.2.1
1 version - Latest release: over 6 years ago - 23 downloads total
Top 1.5% on hub.docker.com
biocontainers/batman phenomenal-v1.2.12.0_cv1.1.72
Bayesian Automated Metabolite Analyser for NMR spectra (BATMAN).
2 versions - Latest release: about 6 years ago - 1.01 thousand downloads total - 0 stars on GitHub
Top 3.5% on hub.docker.com
biocontainers/isaslicer phenomenal-v0.9.5_cv0.1.0.1
1 version - Latest release: about 6 years ago - 412 downloads total
Top 3.3% on hub.docker.com
biocontainers/nmrml2isa phenomenal-v0.3.0_cv0.2.12
1 version - Latest release: about 6 years ago - 436 downloads total
Top 0.6% on hub.docker.com
biocontainers/vcftools 0.1.15
"tools written in Perl and C++ for working with VCF files
7 versions - Latest release: about 6 years ago - 167 thousand downloads total - 620 stars on GitHub
Top 1.4% on hub.docker.com
biocontainers/peptideshaker 1.10.3
interpretation of proteomics identification results
10 versions - Latest release: about 6 years ago - 1.12 thousand downloads total - 634 stars on GitHub
Top 0.4% on hub.docker.com
biocontainers/abyss 1.9.0
ABySS is a *de novo* sequence assembler
5 versions - Latest release: about 6 years ago - 1 dependent repositories - 12.1 thousand downloads total - 620 stars on GitHub
Top 0.4% on hub.docker.com
biocontainers/bamtools 2.4.0
C++ API & command-line toolkit for working with BAM data
8 versions - Latest release: about 6 years ago - 1 dependent repositories - 15.8 thousand downloads total - 634 stars on GitHub
Top 0.6% on hub.docker.com
biocontainers/bedtools 2.25.0
a powerful toolset for genome arithmetic
9 versions - Latest release: about 6 years ago - 211 thousand downloads total - 634 stars on GitHub
Top 0.7% on hub.docker.com
biocontainers/blast 2.2.31
basic local alignment search tool
5 versions - Latest release: about 6 years ago - 78.6 thousand downloads total - 620 stars on GitHub
Top 0.9% on hub.docker.com
biocontainers/bowtie 1.1.2
an ultrafast memory-efficient short read aligner
5 versions - Latest release: about 6 years ago - 10.4 thousand downloads total - 620 stars on GitHub
Top 0.3% on hub.docker.com
biocontainers/bowtie2 2.2.9
an ultrafast memory-efficient short read aligner
12 versions - Latest release: about 6 years ago - 1 dependent repositories - 69.9 thousand downloads total - 620 stars on GitHub
Top 0.5% on hub.docker.com
biocontainers/bwa 0.7.15
Burrow-Wheeler Aligner for pairwise alignment between DNA sequences
12 versions - Latest release: about 6 years ago - 1 dependent repositories - 53.6 thousand downloads total - 634 stars on GitHub
Top 1.5% on hub.docker.com
biocontainers/cava 1.1.1
lightweight, fast and flexible NGS variant annotation tool
3 versions - Latest release: about 6 years ago - 877 downloads total - 634 stars on GitHub
Top 1.4% on hub.docker.com
biocontainers/denovogui 1.10.4
graphical user interface for de novo sequencing of tandem mass spectra
8 versions - Latest release: about 6 years ago - 1.04 thousand downloads total - 634 stars on GitHub
Top 1.3% on hub.docker.com
biocontainers/dia-umpire 2.1.2
computational analysis of DIA mass spectrometry-based proteomics data
6 versions - Latest release: about 6 years ago - 1.59 thousand downloads total - 634 stars on GitHub
Top 0.6% on hub.docker.com
biocontainers/emboss 6.5.7
software analysis package
5 versions - Latest release: about 6 years ago - 217 thousand downloads total - 620 stars on GitHub
Top 1.9% on hub.docker.com
biocontainers/pepnovop 20120423
de novo sequencing of low precision MS/MS data
1 version - Latest release: about 6 years ago - 221 downloads total - 634 stars on GitHub
Top 1.6% on hub.docker.com
biocontainers/saintq 0.0.2
assigning confidence scores to protein-protein interactions based on quantitative proteomics
3 versions - Latest release: about 6 years ago - 809 downloads total - 620 stars on GitHub
Top 0.3% on hub.docker.com
biocontainers/picard 2.3.0
Java CLI tools for manipulating HTS data and formats
9 versions - Latest release: about 6 years ago - 1 dependent repositories - 39.1 thousand downloads total - 620 stars on GitHub
Top 0.2% on hub.docker.com
biocontainers/samtools 1.3.1
Tools for manipulating next-generation sequencing data
14 versions - Latest release: about 6 years ago - 1 dependent repositories - 505 thousand downloads total - 634 stars on GitHub
Top 1.4% on hub.docker.com
biocontainers/searchgui 2.8.6
graphical user interface for proteomics identification search engines
6 versions - Latest release: about 6 years ago - 1.01 thousand downloads total - 620 stars on GitHub
Top 0.8% on hub.docker.com
biocontainers/xtandem 15-12-15-2
software that can match tandem mass spectra with peptide sequences
2 versions - Latest release: about 6 years ago - 18 thousand downloads total - 634 stars on GitHub
Top 1.5% on hub.docker.com
biocontainers/test-ci v0.0.2
11 versions - Latest release: about 6 years ago - 11.3 thousand downloads total
Top 2.5% on hub.docker.com
biocontainers/gatk v3.4_cv1
1 version - Latest release: about 6 years ago - 907 downloads total
Top 3.2% on hub.docker.com
biocontainers/biosquid-dev v1.9gcvs20050121-7-deb_cv1
1 version - Latest release: about 6 years ago - 466 downloads total
Top 3.9% on hub.docker.com
biocontainers/epigrass v2.4.7-1-deb_cv1
1 version - Latest release: about 6 years ago - 88 downloads total
Top 3.2% on hub.docker.com
biocontainers/filo v1.1.0-3b1-deb_cv1
1 version - Latest release: about 6 years ago - 470 downloads total
Top 3.2% on hub.docker.com
biocontainers/falcon v1.8.6-1.1-deb_cv1
1 version - Latest release: about 6 years ago - 476 downloads total
Top 3.2% on hub.docker.com
biocontainers/fis-gtm-6.3-000a v6.3-000A-1-deb_cv1
1 version - Latest release: about 6 years ago - 468 downloads total
Top 3.1% on hub.docker.com
biocontainers/hyphygui v2.2.7dfsg-1b2-deb_cv1
1 version - Latest release: about 6 years ago - 476 downloads total
Top 3.2% on hub.docker.com
biocontainers/openmolar v1.0.15-gd81f9e5-1-deb_cv1
1 version - Latest release: about 6 years ago - 465 downloads total
Top 3.2% on hub.docker.com
biocontainers/predictprotein v1.1.07-2-deb_cv1
1 version - Latest release: about 6 years ago - 471 downloads total
Top 4.8% on hub.docker.com
biocontainers/python-avro v1.8.1dfsg-1-deb_cv1
1 version - Latest release: about 6 years ago - 42 downloads total
Top 6.1% on hub.docker.com
biocontainers/python-ball v1.4.3beta1-3-deb_cv1
1 version - Latest release: about 6 years ago - 22 downloads total
Top 3.5% on hub.docker.com
biocontainers/python-ballview v1.4.3beta1-3-deb_cv1
1 version - Latest release: about 6 years ago - 414 downloads total
Top 5.5% on hub.docker.com
biocontainers/python-biom-format v2.1.5dfsg-7-deb_cv1
1 version - Latest release: about 6 years ago - 31 downloads total
Top 4.9% on hub.docker.com
biocontainers/python-biopython-sql v1.68dfsg-3-deb_cv1
1 version - Latest release: about 6 years ago - 41 downloads total
Top 6.1% on hub.docker.com
biocontainers/python-burrito v0.9.1-1-deb_cv1
1 version - Latest release: about 6 years ago - 23 downloads total
Top 5.9% on hub.docker.com
biocontainers/python-biopython v1.68dfsg-3-deb_cv1
1 version - Latest release: about 6 years ago - 25 downloads total
Top 4.8% on hub.docker.com
biocontainers/python-bz2file v0.98-1-deb_cv1
1 version - Latest release: about 6 years ago - 51 downloads total
Top 3.5% on hub.docker.com
biocontainers/python-clips v1.0.7.348clips-2-deb_cv1
1 version - Latest release: about 6 years ago - 402 downloads total
Top 3.5% on hub.docker.com
biocontainers/python-cobra-data v0.5.9-1-deb_cv1
1 version - Latest release: about 6 years ago - 407 downloads total
Top 5.5% on hub.docker.com
biocontainers/python-cogent v1.9-9-deb_cv1
1 version - Latest release: about 6 years ago - 31 downloads total
Top 3.5% on hub.docker.com
biocontainers/python-corepywrap v1.005-4b3-deb_cv1
1 version - Latest release: about 6 years ago - 405 downloads total
Top 3.5% on hub.docker.com
biocontainers/python-casmoothing v0.2-1b1-deb_cv1
1 version - Latest release: about 6 years ago - 413 downloads total
Top 4.7% on hub.docker.com
biocontainers/python-cutadapt v1.12-2-deb_cv1
1 version - Latest release: about 6 years ago - 45 downloads total
Top 4.8% on hub.docker.com
biocontainers/python-csb v1.2.3dfsg-3-deb_cv1
1 version - Latest release: about 6 years ago - 39 downloads total
Top 5.9% on hub.docker.com
biocontainers/python-dendropy v4.2.0dfsg-1-deb_cv1
1 version - Latest release: about 6 years ago - 26 downloads total
Top 3.5% on hub.docker.com
biocontainers/python-cobra v0.5.9-1-deb_cv1
1 version - Latest release: about 6 years ago - 405 downloads total
Top 5.9% on hub.docker.com
biocontainers/python-fitbit v0.2.4-1-deb_cv1
1 version - Latest release: about 6 years ago - 26 downloads total
Top 4.8% on hub.docker.com
biocontainers/python-fast5 v0.5.8-1b2-deb_cv1
1 version - Latest release: about 6 years ago - 43 downloads total
Top 3.4% on hub.docker.com
biocontainers/python-gdcm v2.6.6-3-deb_cv1
1 version - Latest release: about 6 years ago - 417 downloads total
Top 5.0% on hub.docker.com
biocontainers/python-fastcluster v1.1.22-1-deb_cv1
1 version - Latest release: about 6 years ago - 39 downloads total
Top 5.9% on hub.docker.com
biocontainers/python-freecontact v1.1-2b2-deb_cv1
1 version - Latest release: about 6 years ago - 26 downloads total
Top 3.5% on hub.docker.com
biocontainers/python-hl7 v0.3.4-1-deb_cv1
1 version - Latest release: about 6 years ago - 414 downloads total
Top 3.5% on hub.docker.com
biocontainers/python-intervaltree-bio v1.0.1-1-deb_cv1
1 version - Latest release: about 6 years ago - 405 downloads total
Top 6.3% on hub.docker.com
biocontainers/python-mia v0.1.9-1-deb_cv1
1 version - Latest release: about 6 years ago - 22 downloads total
Top 3.4% on hub.docker.com
biocontainers/python-kineticstools v0.6.120161222-1-deb_cv1
1 version - Latest release: about 6 years ago - 416 downloads total
Top 5.5% on hub.docker.com
biocontainers/python-multipletau v0.1.7ds-1-deb_cv1
1 version - Latest release: about 6 years ago - 31 downloads total
Top 4.8% on hub.docker.com
biocontainers/python-odil v0.7.3-1-deb_cv1
1 version - Latest release: about 6 years ago - 40 downloads total
Top 3.5% on hub.docker.com
biocontainers/python-openslide v1.1.1-2-deb_cv1
1 version - Latest release: about 6 years ago - 405 downloads total
Top 4.8% on hub.docker.com
biocontainers/python-pbalign v0.3.0-1-deb_cv1
1 version - Latest release: about 6 years ago - 41 downloads total
Top 3.4% on hub.docker.com
biocontainers/python-matplotlib-venn v0.11.5-1-deb_cv1
1 version - Latest release: about 6 years ago - 418 downloads total
Top 3.4% on hub.docker.com
biocontainers/python-pbconsensuscore v1.0.2-2-deb_cv1
1 version - Latest release: about 6 years ago - 418 downloads total
Top 5.2% on hub.docker.com
biocontainers/python-pbcommand v0.5.3-1-deb_cv1
1 version - Latest release: about 6 years ago - 34 downloads total
Top 6.3% on hub.docker.com
biocontainers/python-dictobj v0.4-1-deb_cv1
1 version - Latest release: about 6 years ago - 22 downloads total
Top 3.4% on hub.docker.com
biocontainers/python-pbcore v1.2.11dfsg-1-deb_cv1
1 version - Latest release: about 6 years ago - 422 downloads total
Top 3.5% on hub.docker.com
biocontainers/python-pbbanana v15.8.24dfsg-2-deb_cv1
1 version - Latest release: about 6 years ago - 415 downloads total
Top 3.4% on hub.docker.com
biocontainers/python-mne v0.13.1dfsg-3-deb_cv1
1 version - Latest release: about 6 years ago - 419 downloads total
Top 5.2% on hub.docker.com
biocontainers/python-pysam-tests v0.10.0ds-2-deb_cv1
1 version - Latest release: about 6 years ago - 35 downloads total
Top 3.4% on hub.docker.com
biocontainers/python-pbsuite-utils v15.8.24dfsg-2-deb_cv1
1 version - Latest release: about 6 years ago - 421 downloads total
Top 5.6% on hub.docker.com
biocontainers/python-pyfaidx v0.4.8.1-1-deb_cv1
1 version - Latest release: about 6 years ago - 29 downloads total
Top 5.6% on hub.docker.com
biocontainers/python-pysam v0.10.0ds-2-deb_cv1
1 version - Latest release: about 6 years ago - 24 downloads total
Top 3.5% on hub.docker.com
biocontainers/python-pyvcf v0.6.8-1-deb_cv1
1 version - Latest release: about 6 years ago - 404 downloads total
Top 4.8% on hub.docker.com
biocontainers/python-qcli v0.1.1-1-deb_cv1
1 version - Latest release: about 6 years ago - 42 downloads total
Top 3.5% on hub.docker.com
biocontainers/python-rdflib-jsonld v0.4.0-2-deb_cv1
1 version - Latest release: about 6 years ago - 411 downloads total
Top 5.3% on hub.docker.com
biocontainers/python-pbgenomicconsensus v2.1.0-1-deb_cv1
1 version - Latest release: about 6 years ago - 33 downloads total
Top 5.6% on hub.docker.com
biocontainers/python-ruffus v2.6.3dfsg-4-deb_cv1
1 version - Latest release: about 6 years ago - 31 downloads total
Top 3.4% on hub.docker.com
biocontainers/python-sqlsoup v0.9.1-1-deb_cv1
1 version - Latest release: about 6 years ago - 415 downloads total
Top 3.5% on hub.docker.com
biocontainers/python-schema-salad v2.2.20170111180227-1-deb_cv1
1 version - Latest release: about 6 years ago - 407 downloads total
Top 3.6% on hub.docker.com
biocontainers/python-visionegg v1.2.1-2-deb_cv1
1 version - Latest release: about 6 years ago - 402 downloads total
Top 4.9% on hub.docker.com
biocontainers/python-xopen v0.1.1-1-deb_cv1
1 version - Latest release: about 6 years ago - 37 downloads total
Top 3.5% on hub.docker.com
biocontainers/python3-avro v1.8.1dfsg-1-deb_cv1
1 version - Latest release: about 6 years ago - 416 downloads total
Top 6.4% on hub.docker.com
biocontainers/python3-biom-format v2.1.5dfsg-7-deb_cv1
1 version - Latest release: about 6 years ago - 19 downloads total
Top 5.0% on hub.docker.com
biocontainers/python-vtkgdcm v2.6.6-3-deb_cv1
1 version - Latest release: about 6 years ago - 39 downloads total
Top 3.4% on hub.docker.com
biocontainers/python-vtk-dicom v0.7.10-1b2-deb_cv1
1 version - Latest release: about 6 years ago - 426 downloads total
Top 5.1% on hub.docker.com
biocontainers/python-tifffile v20151006-1-deb_cv1
1 version - Latest release: about 6 years ago - 36 downloads total
Top 4.7% on hub.docker.com
biocontainers/python3-biopython-sql v1.68dfsg-3-deb_cv1
1 version - Latest release: about 6 years ago - 47 downloads total
Top 6.1% on hub.docker.com
biocontainers/python-screed v0.9-2-deb_cv1
1 version - Latest release: about 6 years ago - 23 downloads total
Top 3.5% on hub.docker.com
biocontainers/python3-burrito v0.9.1-1-deb_cv1
1 version - Latest release: about 6 years ago - 402 downloads total
Top 3.4% on hub.docker.com
biocontainers/python3-bz2file v0.98-1-deb_cv1
1 version - Latest release: about 6 years ago - 424 downloads total
Top 4.4% on hub.docker.com
biocontainers/python3-cutadapt v1.12-2-deb_cv1
1 version - Latest release: about 6 years ago - 57 downloads total
Top 4.9% on hub.docker.com
biocontainers/python3-csb v1.2.3dfsg-3-deb_cv1
1 version - Latest release: about 6 years ago - 40 downloads total
Top 3.5% on hub.docker.com
biocontainers/python3-biopython v1.68dfsg-3-deb_cv1
1 version - Latest release: about 6 years ago - 471 downloads total
Top 3.5% on hub.docker.com
biocontainers/python3-dendropy v4.2.0dfsg-1-deb_cv1
1 version - Latest release: about 6 years ago - 411 downloads total
Top 3.4% on hub.docker.com
biocontainers/python3-fast5 v0.5.8-1b2-deb_cv1
1 version - Latest release: about 6 years ago - 421 downloads total
Top 4.8% on hub.docker.com
biocontainers/python3-dna-jellyfish v2.2.6-1b1-deb_cv1
1 version - Latest release: about 6 years ago - 43 downloads total