Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

hub.docker.com namespaces: biocontainers

biocontainers/allpathslg
whole‐genome shotgun assembler that can generate high‐quality genome assemblies using short reads
Latest release: 9 days ago - 3 downloads total - 620 stars on GitHub
Top 8.7% on hub.docker.com
biocontainers/bamutils
programs that perform operations on SAM/BAM files
Latest release: 11 days ago - 7 downloads total - 620 stars on GitHub
biocontainers/pia-web-server
Web server for PIA - Protein Inference Algorithms
Latest release: about 2 months ago - 1 downloads total - 620 stars on GitHub
Top 2.5% on hub.docker.com
biocontainers/longranger
Latest release: 2 months ago - 557 downloads total
Top 1.2% on hub.docker.com
biocontainers/openms 2.2.0_cv6
C++ libraries ans tools for MS/MS data analysis
8 versions - Latest release: 2 months ago - 3.2 thousand downloads total - 634 stars on GitHub
Top 1.6% on hub.docker.com
biocontainers/cellpose 3.0.1_cv1
6 versions - Latest release: 3 months ago - 15.1 thousand downloads total
Top 1.9% on hub.docker.com
biocontainers/diann 1.8.1_cv2
4 versions - Latest release: 4 months ago - 22.6 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/ncbi-tools-bin 6.1.20170106-6-deb_cv2
3 versions - Latest release: 6 months ago - 7.66 thousand downloads total
Top 0.2% on hub.docker.com
biocontainers/biocontainers debian-buster-backports_cv2
Biocontainers base Image
15 versions - Latest release: 6 months ago - 17 dependent repositories - 300 thousand downloads total - 634 stars on GitHub
biocontainers/spark 3.1.3_cv1
1 version - Latest release: 7 months ago - 24 downloads total
biocontainers/stitching-spark 1.10.0_cv1
1 version - Latest release: 7 months ago - 11 downloads total
biocontainers/hifiadapterfilt 2.0.0_cv2
1 version - Latest release: 7 months ago - 17 downloads total
biocontainers/megahit 1.2.9_cv1
1 version - Latest release: 9 months ago - 82 downloads total
Top 2.0% on hub.docker.com
biocontainers/ncbi-datasets-cli 15.12.0_cv23.1.0-4
3 versions - Latest release: 9 months ago - 10.8 thousand downloads total
Top 8.4% on hub.docker.com
biocontainers/seaborn 0.12.2_cv1
1 version - Latest release: about 1 year ago - 4.28 thousand downloads total
Top 2.6% on hub.docker.com
biocontainers/mitohifi 3.0.0_cv1
2 versions - Latest release: about 1 year ago - 3.55 thousand downloads total
biocontainers/r-metamix 0.3_cv1
1 version - Latest release: about 1 year ago - 3.93 thousand downloads total
biocontainers/cellprofiler 4.2.5_cv1
1 version - Latest release: over 1 year ago - 4.34 thousand downloads total
Top 1.5% on hub.docker.com
biocontainers/patchwork 0.5.2_cv1
3 versions - Latest release: over 1 year ago - 12.6 thousand downloads total
Top 2.2% on hub.docker.com
biocontainers/openbugs 3.2.3_cv1
1 version - Latest release: over 1 year ago - 5.48 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/maracluster 1.04.1_cv1
2 versions - Latest release: over 1 year ago - 9.47 thousand downloads total
Top 1.7% on hub.docker.com
biocontainers/oncocnv v7.0_cv2
2 versions - Latest release: over 1 year ago - 12.1 thousand downloads total
Top 1.8% on hub.docker.com
biocontainers/mace 1.2_cv1
1 version - Latest release: over 1 year ago - 4.31 thousand downloads total
Top 1.2% on hub.docker.com
biocontainers/eido 0.1.9_cv2
4 versions - Latest release: over 1 year ago - 29.5 thousand downloads total
Top 1.8% on hub.docker.com
biocontainers/hap-ibd 1.0.rev20May22.818_cv1
1 version - Latest release: over 1 year ago - 4.34 thousand downloads total
Top 1.7% on hub.docker.com
biocontainers/msisensor2 0.1_cv1
1 version - Latest release: over 1 year ago - 4.46 thousand downloads total
Top 1.7% on hub.docker.com
biocontainers/bamdst 1.0.9_cv1
1 version - Latest release: over 1 year ago - 5.13 thousand downloads total
Top 2.4% on hub.docker.com
biocontainers/kast 1.0.1_cv1
2 versions - Latest release: almost 2 years ago - 628 downloads total
Top 3.4% on hub.docker.com
biocontainers/geneocr-api 1.0_cv1
1 version - Latest release: almost 2 years ago - 145 downloads total
Top 3.3% on hub.docker.com
biocontainers/geneocr-ui 1.0_cv1
1 version - Latest release: almost 2 years ago - 148 downloads total
Top 2.3% on hub.docker.com
biocontainers/phylotools v0.2.4_cv1
1 version - Latest release: about 2 years ago - 894 downloads total
Top 2.2% on hub.docker.com
biocontainers/avivator v0.12.3_cv1
1 version - Latest release: over 2 years ago - 1.09 thousand downloads total
Top 1.8% on hub.docker.com
biocontainers/imputeme vv1.0.7_cv1
2 versions - Latest release: over 2 years ago - 3.94 thousand downloads total
Top 1.4% on hub.docker.com
biocontainers/alien-hunter v1.7-7-deb_cv2
3 versions - Latest release: over 2 years ago - 13.1 thousand downloads total
Top 1.8% on hub.docker.com
biocontainers/falcon-ms v0.1.3_cv1
1 version - Latest release: over 2 years ago - 3.47 thousand downloads total
Top 1.8% on hub.docker.com
biocontainers/isee-galaxy v3.13_cv1.0.0
1 version - Latest release: over 2 years ago - 3.66 thousand downloads total
Top 4.7% on hub.docker.com
biocontainers/ci-proxy latest
1 version - Latest release: over 2 years ago - 43 downloads total
Top 1.9% on hub.docker.com
biocontainers/autoclassweb v2.2.1_cv1
3 versions - Latest release: over 2 years ago - 2.94 thousand downloads total
Top 2.1% on hub.docker.com
biocontainers/conodictor v2.3.1_cv1
2 versions - Latest release: over 2 years ago - 1.75 thousand downloads total
Top 2.3% on hub.docker.com
biocontainers/biotools-pr latest
1 version - Latest release: about 3 years ago - 1.22 thousand downloads total
Top 5.3% on hub.docker.com
biocontainers/bioconda-backup latest
1 version - Latest release: about 3 years ago - 49 downloads total
Top 2.5% on hub.docker.com
biocontainers/jenkins_spec_check latest
1 version - Latest release: about 3 years ago - 871 downloads total
Top 2.2% on hub.docker.com
biocontainers/nanosv v1.2.4_cv1
1 version - Latest release: about 3 years ago - 1.21 thousand downloads total
Top 2.0% on hub.docker.com
biocontainers/gwas-fasp vv1.0.0_cv1
1 version - Latest release: over 3 years ago - 2.25 thousand downloads total
Top 2.0% on hub.docker.com
biocontainers/deepgoplus v1.0.0_cv1
1 version - Latest release: over 3 years ago - 2.28 thousand downloads total
Top 1.9% on hub.docker.com
biocontainers/bior_annotate v2.1.1_cv3
3 versions - Latest release: almost 4 years ago - 2.86 thousand downloads total
Top 1.4% on hub.docker.com
biocontainers/fastp v0.20.1_cv1
2 versions - Latest release: almost 4 years ago - 21.6 thousand downloads total
Top 1.8% on hub.docker.com
biocontainers/ccmetagen v1.1.5_cv1
1 version - Latest release: about 4 years ago - 3.7 thousand downloads total
Top 1.1% on hub.docker.com
biocontainers/talon v5.0_cv1
9 versions - Latest release: about 4 years ago - 66.4 thousand downloads total
Top 1.8% on hub.docker.com
biocontainers/vg v1.23.0-plusds-1-deb_cv1
1 version - Latest release: about 4 years ago - 4.33 thousand downloads total
Top 1.5% on hub.docker.com
biocontainers/krona v2.7.1_cv1
1 version - Latest release: over 4 years ago - 12.1 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/philosopher v2.0.0_cv2.0.0
1 version - Latest release: over 4 years ago - 6.74 thousand downloads total
Top 1.1% on hub.docker.com
biocontainers/control-freec v11.5_cv1
1 version - Latest release: over 4 years ago - 52.1 thousand downloads total
Top 1.4% on hub.docker.com
biocontainers/xopen v0.5.0-2-deb-py3_cv1
4 versions - Latest release: over 4 years ago - 15.3 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/zalign v0.9.1-4-deb_cv1
2 versions - Latest release: over 4 years ago - 7.87 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/zstd v1.3.8dfsg-3-deb_cv1
2 versions - Latest release: over 4 years ago - 8.06 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/yaggo v1.5.10-2-deb_cv1
2 versions - Latest release: over 4 years ago - 7.86 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/xmedcon v0.16.1dfsg-1-deb_cv1
2 versions - Latest release: over 4 years ago - 7.46 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/velvetoptimiser v2.2.6-2-deb_cv1
2 versions - Latest release: over 4 years ago - 7.91 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/wise v2.4.1-21-deb_cv1
2 versions - Latest release: over 4 years ago - 7.84 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/wise-data v2.4.1-21-deb_cv1
2 versions - Latest release: over 4 years ago - 7.87 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/wigeon v20101212dfsg1-2-deb_cv1
2 versions - Latest release: over 4 years ago - 7.45 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/wgerman-medical v20160103-3-deb_cv1
1 version - Latest release: over 4 years ago - 7.81 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/vtkgdcm v2.8.8-9-deb-py3_cv1
2 versions - Latest release: over 4 years ago - 7.89 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/trinityrnaseq v2.6.6dfsg-6-deb_cv1
2 versions - Latest release: over 4 years ago - 7.98 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/vtk-dicom v0.8.9-1-deb-py3_cv1
2 versions - Latest release: over 4 years ago - 7.48 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/vtk-dicom-tools v0.8.9-1-deb_cv1
2 versions - Latest release: over 4 years ago - 7.86 thousand downloads total
Top 1.5% on hub.docker.com
biocontainers/unicycler v0.4.7dfsg-2-deb_cv1
2 versions - Latest release: over 4 years ago - 8.53 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/vsearch v2.10.4-1-deb_cv1
2 versions - Latest release: over 4 years ago - 7.6 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/velvet-tests v1.2.10dfsg1-5-deb_cv1
2 versions - Latest release: over 4 years ago - 7.87 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/velvet-example v1.2.10dfsg1-5-deb_cv1
2 versions - Latest release: over 4 years ago - 7.83 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/velvet-long v1.2.10dfsg1-5-deb_cv1
2 versions - Latest release: over 4 years ago - 7.45 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/varna v3-93ds-2-deb_cv1
2 versions - Latest release: over 4 years ago - 7.84 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/uc-echo v1.12-11-deb_cv1
2 versions - Latest release: over 4 years ago - 7.88 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/typed-ast v1.3.1-1-deb-py3_cv1
2 versions - Latest release: over 4 years ago - 7.86 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/unicycler-data v0.4.7dfsg-2-deb_cv1
2 versions - Latest release: over 4 years ago - 7.87 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/treetime v0.5.3-1-deb-py3_cv1
1 version - Latest release: over 4 years ago - 7.79 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/treeview v1.1.6.4dfsg1-4-deb_cv1
2 versions - Latest release: over 4 years ago - 7.44 thousand downloads total
Top 1.3% on hub.docker.com
biocontainers/trimmomatic v0.38dfsg-1-deb_cv1
2 versions - Latest release: over 4 years ago - 21.6 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/treeviewx v0.5.1git20100823.7e4d0e9-1-deb_cv1
2 versions - Latest release: over 4 years ago - 7.46 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/tree-ppuzzle v5.2-11-deb_cv1
2 versions - Latest release: over 4 years ago - 7.49 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/tree-puzzle v5.2-11-deb_cv1
2 versions - Latest release: over 4 years ago - 7.48 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/transtermhp v2.09-4-deb_cv1
2 versions - Latest release: over 4 years ago - 7.87 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/transdecoder v5.0.1-2-deb_cv1
2 versions - Latest release: over 4 years ago - 7.62 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/tnseq-transit v2.3.4-1-deb_cv1
2 versions - Latest release: over 4 years ago - 7.9 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/surankco v0.0.r5dfsg-2-deb_cv1
2 versions - Latest release: over 4 years ago - 7.47 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/transrate-tools v1.0.0-2-deb_cv1
2 versions - Latest release: over 4 years ago - 7.9 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/tracetuner v3.0.6betadfsg-1-deb_cv1
1 version - Latest release: over 4 years ago - 7.42 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/trace2dbest v3.0.1-1-deb_cv1
1 version - Latest release: over 4 years ago - 7.77 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/tifffile v20181128-1-deb_cv1
2 versions - Latest release: over 4 years ago - 7.88 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/toppred v1.10-7-deb_cv1
2 versions - Latest release: over 4 years ago - 7.82 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/tm-align v20170708dfsg-2-deb_cv1
2 versions - Latest release: over 4 years ago - 7.82 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/tigr-glimmer v3.02b-2-deb_cv1
2 versions - Latest release: over 4 years ago - 7.87 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/theseus v3.3.0-8-deb_cv1
2 versions - Latest release: over 4 years ago - 7.87 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/t-coffee v12.00.7fb08c2-4-deb_cv1
2 versions - Latest release: over 4 years ago - 7.87 thousand downloads total
Top 0.5% on hub.docker.com
biocontainers/tabix v1.9-11-deb_cv1
2 versions - Latest release: over 4 years ago - 1 dependent repositories - 90.6 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/tantan v22-1-deb_cv1
2 versions - Latest release: over 4 years ago - 7.47 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/sumtrees v4.4.0-1-deb_cv1
2 versions - Latest release: over 4 years ago - 7.48 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/swarm v2.2.2dfsg-2-deb_cv1
2 versions - Latest release: over 4 years ago - 7.49 thousand downloads total
Top 1.6% on hub.docker.com
biocontainers/sumatra v1.0.31-2-deb_cv1
2 versions - Latest release: over 4 years ago - 7.45 thousand downloads total