Ecosyste.ms: Packages

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juliahub.com packages

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Top 0.2% on juliahub.com
JuMP 1.22.1 💰
Modeling language for Mathematical Optimization (linear, mixed-integer, conic, semidefinite, nonl...
61 versions - Latest release: 3 days ago - 281 dependent packages - 220 dependent repositories - 2,077 stars on GitHub
BplusApp 0.1.1
The graphics/input modules for my Julia game framework, "B+"
2 versions - Latest release: 2 months ago - 2 dependent packages - 0 stars on GitHub
Stuffing 0.10.0
An algorithm for collision detection and 2D irregular nesting
28 versions - Latest release: 10 months ago - 1 dependent package - 8 stars on GitHub
TidierFiles 0.1.1
Tidier file reading and writing in Julia, modeled after the readr, haven, readxl, and writexl R p...
2 versions - Latest release: about 1 month ago - 1 dependent package - 9 stars on GitHub
QuantumDynamics 0.2.1
quantum dynamics simulation environment
3 versions - Latest release: 3 months ago - 23 stars on GitHub
ClimaLand 0.12.0
Clima's Land Model
7 versions - Latest release: 5 days ago - 1 dependent package - 30 stars on GitHub
PopGen 0.9.4
Population Genetics in Julia
23 versions - Latest release: over 1 year ago - 1 dependent package - 42 stars on GitHub
Top 1.3% on juliahub.com
MathOptInterface 1.29.0
An abstraction layer for mathematical optimization solvers
99 versions - Latest release: 30 days ago - 189 dependent packages - 34 dependent repositories - 361 stars on GitHub
Bio 1.0.1
[DEPRECATED] Bioinformatics and Computational Biology Infrastructure for Julia
2 versions - Latest release: over 1 year ago - 8 dependent repositories - 257 stars on GitHub
Top 4.8% on juliahub.com
Automa 1.0.3
A julia code generator for regular expressions
10 versions - Latest release: 4 months ago - 19 dependent packages - 18 dependent repositories - 171 stars on GitHub
Top 2.9% on juliahub.com
BioSequences 3.1.6
Biological sequences for the julia language
19 versions - Latest release: 7 months ago - 32 dependent packages - 51 dependent repositories - 141 stars on GitHub
Top 0.8% on juliahub.com
OrdinaryDiffEq 6.76.0 💰
High performance ordinary differential equation (ODE) and differential-algebraic equation (DAE) s...
356 versions - Latest release: 6 days ago - 137 dependent packages - 59 dependent repositories - 505 stars on GitHub
CliffordNumbers removed
MLJFlow 0.4.1
Connecting MLJ and MLflow thanks to MLFlowClient.jl
7 versions - Latest release: about 2 months ago - 1 dependent package - 7 stars on GitHub
Top 9.6% on juliahub.com
FASTX 2.1.5 💰
Parse and process FASTA and FASTQ formatted files of biological sequences.
15 versions - Latest release: about 2 months ago - 19 dependent packages - 49 stars on GitHub
SequenceVariation 0.2.2
Biological sequence variation
8 versions - Latest release: over 1 year ago - 1 dependent package - 8 stars on GitHub
Top 7.8% on juliahub.com
BioStructures 3.0.0
A Julia package to read, write and manipulate macromolecular structures (particularly proteins)
31 versions - Latest release: 5 months ago - 5 dependent packages - 8 dependent repositories - 77 stars on GitHub
BED 0.3.0 💰
5 versions - Latest release: about 2 years ago - 1 dependent package - 6 stars on GitHub
Top 8.1% on juliahub.com
IntervalTrees 1.1.0 💰
A data structure for efficient manipulation of sets of intervals
2 versions - Latest release: about 1 year ago - 7 dependent packages - 24 dependent repositories - 42 stars on GitHub
Top 6.4% on juliahub.com
BioAlignments 3.1.0 💰
Sequence alignment tools
8 versions - Latest release: over 1 year ago - 12 dependent packages - 13 dependent repositories - 56 stars on GitHub
Top 9.5% on juliahub.com
GenomicFeatures 3.0.0
Tools for genomic features in Julia.
13 versions - Latest release: almost 1 year ago - 13 dependent packages - 8 dependent repositories - 31 stars on GitHub
Top 9.4% on juliahub.com
BioSymbols 5.1.3
Nucleic and amino acid primitive types
13 versions - Latest release: about 1 year ago - 11 dependent packages - 12 dependent repositories - 28 stars on GitHub
XAM 0.4.0 💰
Parse and process SAM and BAM formatted files
14 versions - Latest release: 4 months ago - 4 dependent packages - 23 stars on GitHub
SubstitutionModels 0.5.0
Biological Sequence Substitution Models for Julia
8 versions - Latest release: over 2 years ago - 1 dependent package - 16 stars on GitHub
GenomeGraphs 0.2.0 💰
A modern genomics framework for julia
2 versions - Latest release: over 1 year ago - 1 dependent package - 64 stars on GitHub
Top 9.2% on juliahub.com
Libz 1.0.1
Fast, flexible zlib bindings.
3 versions - Latest release: over 4 years ago - 7 dependent packages - 38 dependent repositories - 27 stars on GitHub
IndexableBitVectors 1.0.0
Fully indexable dictionaries - access/rank/select operations
1 version - Latest release: almost 6 years ago - 1 dependent package - 8 dependent repositories - 12 stars on GitHub
BioServices 0.4.1
Julia interface to APIs for various bio-related web services
5 versions - Latest release: about 1 year ago - 3 dependent packages - 9 dependent repositories - 20 stars on GitHub
ReadDatastores 0.4.0 💰
Datastores for reads, not your papa's FASTQ files.
5 versions - Latest release: over 1 year ago - 2 dependent packages - 10 stars on GitHub
BGZFStreams 0.3.2 💰
BGZF Stream
3 versions - Latest release: 10 months ago - 9 dependent packages - 13 dependent repositories - 12 stars on GitHub
KmerAnalysis 0.4.4 💰
K-mer counting algorithms and count-data utilities for the BioJulia framework
8 versions - Latest release: almost 4 years ago - 1 dependent package - 12 stars on GitHub
MMTF 1.0.0
A julia package to parse and write MMTF file
3 versions - Latest release: almost 3 years ago - 1 dependent package - 7 stars on GitHub
BioTools 1.1.0
Interfaces to common external biological tools from julia scripts and programs
3 versions - Latest release: over 2 years ago - 2 dependent packages - 9 dependent repositories - 13 stars on GitHub
Kmers 0.1.0
In development: Kmer types and methods for julia
1 version - Latest release: almost 2 years ago - 1 dependent package - 18 stars on GitHub
GFF3 0.2.3 💰
6 versions - Latest release: 10 months ago - 9 stars on GitHub
Codecs 0.5.0
Common data encoding algorithms
1 version - Latest release: almost 6 years ago - 1 dependent package - 19 dependent repositories - 10 stars on GitHub
FormatSpecimens 1.1.0
Biological file format specimens for testing packages, and functions to assist in testing.
3 versions - Latest release: over 1 year ago - 10 stars on GitHub
Indexes 0.2.0 💰
5 versions - Latest release: over 2 years ago - 3 dependent packages - 2 stars on GitHub
Top 8.5% on juliahub.com
BioCore 2.0.5
Core types and interfaces for BioJulia packages
6 versions - Latest release: over 5 years ago - 14 dependent packages - 26 dependent repositories - 29 stars on GitHub
TwoBit 0.2.0
Support for working with 2Bit formatted sequence data files
2 versions - Latest release: over 2 years ago - 8 stars on GitHub
BioFetch 0.2.1
Easily fetch biological sequences from online sources
3 versions - Latest release: over 1 year ago - 9 stars on GitHub
BBI 0.2.1
4 versions - Latest release: almost 4 years ago - 2 dependent packages - 3 stars on GitHub
BioGenerics 0.1.4
Generic methods, types and modules for the BioJulia ecosystem.
5 versions - Latest release: 7 months ago - 14 dependent packages - 10 stars on GitHub
GeneticVariation 0.4.1
Datastructures and algorithms for working with genetic variation
2 versions - Latest release: about 1 year ago - 3 dependent packages - 8 dependent repositories - 36 stars on GitHub
BigWig 0.1.0 💰
1 version - Latest release: about 4 years ago - 4 stars on GitHub
BigBed 0.1.0 💰
1 version - Latest release: about 4 years ago - 3 stars on GitHub
AtomsBuilder 0.0.1
Convenient building of atomic structures
2 versions - Latest release: 2 days ago - 2 stars on GitHub
ElectroPhysiology 0.5.9
31 versions - Latest release: about 1 month ago - 3 dependent packages - 0 stars on GitHub
QuantumToolbox 0.8.0
Julia Package for Quantum Optics and Quantum Physics
7 versions - Latest release: 19 days ago - 13 stars on GitHub
Antique 0.7.0 💰
Self-contained, Well-Tested, Well-Documented Analytical Solutions of Quantum Mechanical Equations
9 versions - Latest release: 28 days ago - 7 stars on GitHub
Foresight 0.2.1
A Makie theme
3 versions - Latest release: 3 months ago - 4 stars on GitHub
JuliaSyntax 0.4.8 💰
The Julia compiler frontend
17 versions - Latest release: 5 months ago - 10 dependent packages - 263 stars on GitHub
Top 6.9% on juliahub.com
CPLEX 1.0.3
A Julia interface to the CPLEX solver
38 versions - Latest release: 3 months ago - 4 dependent packages - 1 dependent repositories - 129 stars on GitHub
GaussianRelations 0.2.1
2 versions - Latest release: 2 months ago - 1 stars on GitHub
ParabolicTrigonometry 0.1.0
Parabolic trigonometric functions
1 version - Latest release: 3 months ago - 1 stars on GitHub
Top 4.4% on juliahub.com
ClusterManagers 0.4.6 💰
10 versions - Latest release: about 1 month ago - 7 dependent packages - 5 dependent repositories - 199 stars on GitHub
SnpArrays 0.3.21
Compressed storage for SNP data
12 versions - Latest release: 9 months ago - 9 dependent packages - 1 dependent repositories - 41 stars on GitHub
BplusCore 0.1.1
The Math and Utilities for the Julia B+ library
2 versions - Latest release: 2 months ago - 3 dependent packages - 0 stars on GitHub
Rmath 0.7.1
Archive of functions that emulate R's d-p-q-r functions for probability distributions
6 versions - Latest release: over 1 year ago - 5 dependent packages - 10 dependent repositories - 16 stars on GitHub
Anime 0.4.0
Atmospheric aNd Instrument models in the Measurement Equation
4 versions - Latest release: 2 months ago - 2 stars on GitHub
Top 4.9% on juliahub.com
Catalyst 13.5.1 💰
Chemical reaction network and systems biology interface for scientific machine learning (SciML). ...
72 versions - Latest release: 6 months ago - 17 dependent packages - 423 stars on GitHub
Top 1.7% on juliahub.com
Compat 4.15.0 💰
Compatibility across Julia versions
83 versions - Latest release: 12 days ago - 323 dependent packages - 1,334 dependent repositories - 138 stars on GitHub
BugReporting 0.3.6 💰
Streamlines bug reporting for julia
24 versions - Latest release: about 2 months ago - 17 stars on GitHub
AmplNLWriter 1.2.1
A Julia interface to AMPL-enabled solvers
15 versions - Latest release: 3 months ago - 3 dependent packages - 4 dependent repositories - 64 stars on GitHub
BumpStdlibs 6.1.0 💰
Update the hashes and checksums of all Julia stdlibs in just four clicks.
24 versions - Latest release: 8 months ago - 11 stars on GitHub
Top 7.9% on juliahub.com
ECOS 1.1.2
A Julia interface to the ECOS conic optimization solver
21 versions - Latest release: 3 months ago - 10 dependent packages - 35 dependent repositories - 40 stars on GitHub
PkgDev 1.7.2 💰
Tools for Julia package developers
12 versions - Latest release: about 2 years ago - 5 dependent repositories - 70 stars on GitHub
Top 3.5% on juliahub.com
Gurobi 1.2.3
A Julia interface to the Gurobi Optimizer
56 versions - Latest release: about 2 months ago - 13 dependent packages - 11 dependent repositories - 207 stars on GitHub
Top 1.5% on juliahub.com
PackageCompiler 2.1.17 💰
Compile your Julia Package
65 versions - Latest release: 4 months ago - 30 dependent packages - 11 dependent repositories - 1,371 stars on GitHub
Top 5.2% on juliahub.com
MbedTLS 1.1.9 💰
Wrapper around mbedtls
26 versions - Latest release: 6 months ago - 40 dependent packages - 59 dependent repositories - 40 stars on GitHub
MutableArithmetics 1.4.4
Interface for arithmetics on mutable types in Julia
49 versions - Latest release: 24 days ago - 29 dependent packages - 48 stars on GitHub
BARON 0.8.3
A Julia interface to the BARON mixed-integer nonlinear programming solver
18 versions - Latest release: 2 months ago - 1 dependent package - 18 stars on GitHub
Top 4.7% on juliahub.com
Tokenize 0.5.29 💰
Tokenization for Julia source code
30 versions - Latest release: 27 days ago - 14 dependent packages - 20 dependent repositories - 99 stars on GitHub
Top 5.2% on juliahub.com
SCS 2.0.0
A Julia interface for the SCS conic programming solver
29 versions - Latest release: 6 months ago - 18 dependent packages - 37 dependent repositories - 81 stars on GitHub
TOML 1.0.3 💰
A fast TOML parser for TOML 1.0 written in Julia
4 versions - Latest release: over 1 year ago - 131 dependent packages - 33 stars on GitHub
Top 6.8% on juliahub.com
Example 0.5.3 💰
Example Julia package repo.
13 versions - Latest release: almost 5 years ago - 2 dependent packages - 11 dependent repositories - 118 stars on GitHub
Top 9.0% on juliahub.com
HiGHS 1.9.0
A Julia interface to the HiGHS solver
37 versions - Latest release: 2 months ago - 39 dependent packages - 95 stars on GitHub
Top 1.1% on juliahub.com
IJulia 1.24.2 💰
Julia kernel for Jupyter
35 versions - Latest release: 12 months ago - 31 dependent packages - 25 dependent repositories - 2,705 stars on GitHub
MosekTools 0.15.1
A MathOptInterface.jl interface to the MOSEK solver
27 versions - Latest release: 7 months ago - 9 dependent packages - 29 stars on GitHub
PrecompileTools 1.2.1 💰
Reduce time-to-first-execution of Julia code
9 versions - Latest release: 2 months ago - 342 dependent packages - 184 stars on GitHub
Top 6.3% on juliahub.com
Downloads 1.6.0 💰
16 versions - Latest release: over 2 years ago - 109 dependent packages - 88 stars on GitHub
Dualization 0.5.8
Automatic dualization feature for MathOptInterface.jl
20 versions - Latest release: about 1 year ago - 4 dependent packages - 89 stars on GitHub
ParametricOptInterface 0.7.0
Extension for dealing with parameters
17 versions - Latest release: 5 months ago - 33 stars on GitHub
Xpress 0.16.2
A Julia interface to the FICO Xpress Optimization suite
24 versions - Latest release: 6 months ago - 1 dependent package - 62 stars on GitHub
PolyJuMP 0.7.4
A JuMP extension for Polynomial Optimization
22 versions - Latest release: about 2 months ago - 2 dependent packages - 1 dependent repositories - 41 stars on GitHub
NetworkOptions 1.2.0 💰
4 versions - Latest release: over 3 years ago - 7 dependent packages - 12 stars on GitHub
Top 1.7% on juliahub.com
Convex 0.15.4
A Julia package for disciplined convex programming
50 versions - Latest release: 6 months ago - 23 dependent packages - 23 dependent repositories - 535 stars on GitHub
Top 8.1% on juliahub.com
SumOfSquares 0.7.3
Sum of Squares Programming for Julia
26 versions - Latest release: 8 months ago - 4 dependent packages - 1 dependent repositories - 113 stars on GitHub
Top 10.0% on juliahub.com
KNITRO 0.14.2
A Julia interface to the Artelys Knitro solver
23 versions - Latest release: about 2 months ago - 2 dependent packages - 4 dependent repositories - 72 stars on GitHub
CSDP 1.1.1
Julia Wrapper for CSDP (https://projects.coin-or.org/Csdp/)
17 versions - Latest release: about 1 year ago - 1 dependent package - 9 dependent repositories - 21 stars on GitHub
Pajarito 0.8.2
A solver for mixed-integer convex optimization
5 versions - Latest release: about 1 year ago - 126 stars on GitHub
AllocCheck 0.1.2 💰
AllocCheck
3 versions - Latest release: about 2 months ago - 2 dependent packages - 110 stars on GitHub
SDPA 0.5.1
A Julia interface to the SDPA semidefinite programming solver
12 versions - Latest release: 2 months ago - 11 stars on GitHub
Top 4.1% on juliahub.com
Cbc 1.2.0
A Julia interface to the Coin-OR Branch and Cut solver (CBC)
31 versions - Latest release: 9 months ago - 26 dependent packages - 50 dependent repositories - 80 stars on GitHub
SDPLR 0.1.0
Julia wrapper for SDPLR
1 version - Latest release: 4 months ago
MiniZinc 0.3.8
A Julia interface to the MiniZinc constraint modeling language
15 versions - Latest release: 3 months ago - 15 stars on GitHub
Top 3.6% on juliahub.com
GLPK 1.2.1
A Julia interface to the GNU Linear Programming Kit
44 versions - Latest release: 3 days ago - 40 dependent packages - 36 dependent repositories - 101 stars on GitHub
Top 2.4% on juliahub.com
Ipopt 1.6.2
A Julia interface to the Ipopt nonlinear solver
38 versions - Latest release: 3 months ago - 82 dependent packages - 88 dependent repositories - 143 stars on GitHub
ComplexOptInterface 0.1.2
Extension of MathOptInterface to complex sets
6 versions - Latest release: about 2 years ago - 1 dependent package - 8 stars on GitHub
DiffOpt 0.4.2
Differentiating convex optimization programs w.r.t. program parameters
8 versions - Latest release: about 1 year ago - 116 stars on GitHub