Ecosyste.ms: Packages

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juliahub.com packages

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SubstitutionModels 0.5.0
Biological Sequence Substitution Models for Julia
8 versions - Latest release: almost 3 years ago - 1 dependent package - 16 stars on GitHub
SequenceVariation 0.2.2
Biological sequence variation
8 versions - Latest release: over 1 year ago - 1 dependent package - 8 stars on GitHub
Kmers 0.1.0
In development: Kmer types and methods for julia
1 version - Latest release: almost 2 years ago - 1 dependent package - 18 stars on GitHub
StructuralUnits
1 version - 0 stars on GitHub
GenomeGraphs 0.2.0 💰
A modern genomics framework for julia
2 versions - Latest release: over 1 year ago - 1 dependent package - 64 stars on GitHub
CloughTocher2DInterpolation 0.1.1
Shameless and direct clone of scipy's CloughTocher2DInterpolator for Julia
2 versions - Latest release: 3 months ago - 1 dependent package - 4 stars on GitHub
P4estTypes 0.1.3
4 versions - Latest release: 11 months ago - 7 stars on GitHub
DepotDelivery 0.1.6
Julia Project → Standalone Julia Depot
7 versions - Latest release: 2 months ago - 7 stars on GitHub
Top 8.5% on juliahub.com
BioCore 2.0.5
Core types and interfaces for BioJulia packages
6 versions - Latest release: over 5 years ago - 14 dependent packages - 26 dependent repositories - 29 stars on GitHub
GFF3 0.2.3 💰
6 versions - Latest release: 11 months ago - 9 stars on GitHub
Top 2.0% on juliahub.com
FastGaussQuadrature 1.0.2
Julia package for Gaussian quadrature
18 versions - Latest release: 5 months ago - 99 dependent packages - 38 dependent repositories - 294 stars on GitHub
FlyThroughPaths
Create "fly-throughs" in 3d visualization
1 version - 3 stars on GitHub
GLFixedEffectModels 0.5.3
Fast estimation of generalized linear models with high dimensional categorical variables in Julia
11 versions - Latest release: 5 months ago - 33 stars on GitHub
BGZFStreams 0.3.2 💰
BGZF Stream
3 versions - Latest release: 11 months ago - 9 dependent packages - 13 dependent repositories - 12 stars on GitHub
BioTools 1.1.0
Interfaces to common external biological tools from julia scripts and programs
3 versions - Latest release: over 2 years ago - 2 dependent packages - 9 dependent repositories - 13 stars on GitHub
BBI 0.2.1
4 versions - Latest release: almost 4 years ago - 2 dependent packages - 3 stars on GitHub
KmerAnalysis 0.4.4 💰
K-mer counting algorithms and count-data utilities for the BioJulia framework
8 versions - Latest release: almost 4 years ago - 1 dependent package - 12 stars on GitHub
IndexableBitVectors 1.0.0
Fully indexable dictionaries - access/rank/select operations
1 version - Latest release: almost 6 years ago - 1 dependent package - 8 dependent repositories - 12 stars on GitHub
BED 0.3.0 💰
5 versions - Latest release: about 2 years ago - 1 dependent package - 6 stars on GitHub
BioGenerics 0.1.4
Generic methods, types and modules for the BioJulia ecosystem.
5 versions - Latest release: 8 months ago - 14 dependent packages - 10 stars on GitHub
BigWig 0.1.0 💰
1 version - Latest release: about 4 years ago - 4 stars on GitHub
PeriodicHiddenMarkovModels 0.1.2
Non-homogenous Hidden Markov Models
1 version - Latest release: 9 months ago - 0 stars on GitHub
Amaru 0.6.5
Amaru - Finite element library
7 versions - Latest release: over 1 year ago - 8 stars on GitHub
SSMProblems 0.1.1
Common abstractions for state-space models
2 versions - Latest release: 7 months ago - 2 dependent packages - 1 stars on GitHub
BigBed 0.1.0 💰
1 version - Latest release: about 4 years ago - 3 stars on GitHub
Exodus 0.13.1
A julia interface for accessing the ExodusII data format
42 versions - Latest release: 3 months ago - 4 dependent packages - 6 stars on GitHub
SymbolicInference 1.0.3
Probabilistic inference using the symbolic method.
3 versions - Latest release: 21 days ago - 3 stars on GitHub
ManuscriptOrthography 0.4.6
Orthographic systems of manuscripts in Homer Mulittext project
21 versions - Latest release: 2 months ago - 2 dependent packages - 0 stars on GitHub
BATTestCases 0.1.0
Test cases for BAT.jl and for Bayesian Julia software in general
1 version - Latest release: 9 months ago - 0 stars on GitHub
UnetUtils 0.1.0
UnetStack utilities
1 version - Latest release: 2 months ago - 2 stars on GitHub
UnsupervisedClustering 0.2.2
Yet another clustering package
14 versions - Latest release: 7 months ago - 11 stars on GitHub
CheckedCalls 0.1.0
Call Julia functions with extra checks
1 version - Latest release: 6 months ago - 0 stars on GitHub
FormatSpecimens 1.1.0
Biological file format specimens for testing packages, and functions to assist in testing.
3 versions - Latest release: over 1 year ago - 10 stars on GitHub
MMTF 1.0.0
A julia package to parse and write MMTF file
3 versions - Latest release: about 3 years ago - 1 dependent package - 7 stars on GitHub
Top 0.7% on juliahub.com
Images 0.26.1
An image library for Julia
29 versions - Latest release: 2 months ago - 121 dependent packages - 174 dependent repositories - 524 stars on GitHub
Top 0.7% on juliahub.com
Flux 0.14.15 💰
Relax! Flux is the ML library that doesn't make you tensor
83 versions - Latest release: 3 months ago - 174 dependent packages - 14 dependent repositories - 4,320 stars on GitHub
Codecs 0.5.0
Common data encoding algorithms
1 version - Latest release: almost 6 years ago - 1 dependent package - 19 dependent repositories - 10 stars on GitHub
TwoBit 0.2.0
Support for working with 2Bit formatted sequence data files
2 versions - Latest release: over 2 years ago - 8 stars on GitHub
BioFetch 0.2.1
Easily fetch biological sequences from online sources
3 versions - Latest release: over 1 year ago - 9 stars on GitHub
AlgebraicDynamics 0.2.2
Building dynamical systems compositionally
12 versions - Latest release: 7 months ago - 1 dependent package - 55 stars on GitHub
EarthDataLab 0.13.0
Julia interface for Reading from the Earth System Datacube
7 versions - Latest release: 10 months ago - 33 stars on GitHub
Top 6.0% on juliahub.com
Oceananigans 0.91.0
🌊 Julia software for fast, friendly, flexible, ocean-flavored fluid dynamics on CPUs and GPUs
235 versions - Latest release: about 1 month ago - 9 dependent packages - 843 stars on GitHub
AwkwardArray 0.1.4
Awkward Array in Julia mirrors the Python library, enabling effortless zero-copy data exchange be...
2 versions - Latest release: 3 months ago - 24 stars on GitHub
GasModels 0.10.0
A Julia/JuMP Package for Gas Network Optimization
18 versions - Latest release: 4 months ago - 1 dependent package - 62 stars on GitHub
PowerDynamics 3.1.6
Package for dynamical modeling of power grids
28 versions - Latest release: 5 months ago - 94 stars on GitHub
WorldDynamics 1.0.0
An open-source framework written in Julia for global integrated assessment models.
9 versions - Latest release: about 2 months ago - 63 stars on GitHub
PowerModelsACDC 0.7.4
A hybrid AC/DC OPF package based on PowerModels.jl
19 versions - Latest release: about 2 months ago - 3 dependent packages - 43 stars on GitHub
GHCNData 0.1.5
Helps access the Global Historical Climatological Network's daily data
6 versions - Latest release: 9 months ago - 3 stars on GitHub
Top 2.2% on juliahub.com
NNlib 0.9.15
Neural Network primitives with multiple backends
88 versions - Latest release: 27 days ago - 75 dependent packages - 14 dependent repositories - 195 stars on GitHub
DocumenterInterLinks 0.3.1
A plugin for Documenter.jl that enables linking between projects
11 versions - Latest release: 2 months ago - 0 stars on GitHub
EcoSISTEM 0.2.3
Julia package for ecosystem simulation
9 versions - Latest release: about 2 months ago - 35 stars on GitHub
Wflow 0.7.3
Hydrological modeling
19 versions - Latest release: 5 months ago - 98 stars on GitHub
ClimateTools 0.24.1
Climate science package for Julia
31 versions - Latest release: 12 months ago - 1 dependent package - 115 stars on GitHub
BinaryBuilderProducts
BinaryBuilder2 monorepo
1 version - 6 stars on GitHub
ClimateBase 0.17.1
Tools to analyze and manipulate climate (spatiotemporal) data. Also used by ClimateTools and Clim...
60 versions - Latest release: 30 days ago - 2 dependent packages - 39 stars on GitHub
CodeSearch 0.1.0
Syntax aware code search for Julia
1 version - Latest release: 4 months ago - 3 stars on GitHub
AIBECS 0.13.2
The ideal tool for exploring global marine biogeochemical cycles.
99 versions - Latest release: over 1 year ago - 36 stars on GitHub
Diversity 0.5.12
Julia package for diversity measurement
16 versions - Latest release: about 2 months ago - 1 dependent package - 4 dependent repositories - 31 stars on GitHub
HydroPowerSimulations 0.8.0
Extension of PowerSimulations.jl to model Hydropower devices
11 versions - Latest release: 4 months ago - 5 stars on GitHub
TimeSeriesClustering 0.5.3
Julia implementation of unsupervised learning methods for time series datasets. It provides funct...
4 versions - Latest release: over 4 years ago - 1 dependent package - 74 stars on GitHub
vSmartMOM 1.0.0
A full end-to-end modular software suite for radiative transfer and related atmospheric analysis
2 versions - Latest release: over 1 year ago - 41 stars on GitHub
ClimateSatellite 0.4.3
Julia package that downloads satellite measurements and observational data
17 versions - Latest release: over 3 years ago - 42 stars on GitHub
PkgJogger 0.5.1
Take your packages for a jog!
18 versions - Latest release: about 1 month ago - 13 stars on GitHub
JLLPrefixes 0.3.5
Make yourself at home; JLLs are here to stay
14 versions - Latest release: 2 months ago - 2 dependent packages - 18 stars on GitHub
EarthSciData 0.4.4
11 versions - Latest release: about 2 months ago - 2 stars on GitHub
Stencils 0.3.0
Static Stencil mapping for Julia
8 versions - Latest release: about 2 months ago - 6 stars on GitHub
MethodInspector
Julia package to inspect the names and types of method arguments
4 versions - 1 stars on GitHub
ParameterEstimation 0.3.0
ParameterEstimation.jl is a Julia package for estimating parameters and initial conditions of ODE...
4 versions - Latest release: 5 months ago - 26 stars on GitHub
GeoThermalCloud 0.2.0
Geothermal Cloud for Machine Learning
6 versions - Latest release: 10 months ago - 23 stars on GitHub
Scruff 0.8.5
Scruff.jl
7 versions - Latest release: about 2 months ago - 33 stars on GitHub
Top 6.2% on juliahub.com
Enzyme 0.12.1
Julia bindings for the Enzyme automatic differentiator
84 versions - Latest release: about 1 month ago - 17 dependent packages - 394 stars on GitHub
ITensorNetworks 0.11.0
A package with general tools for working with higher-dimensional tensor networks based on ITensor.
42 versions - Latest release: about 1 month ago - 1 dependent package - 50 stars on GitHub
EnzymeCore 0.7.2
Julia bindings for the Enzyme automatic differentiator
19 versions - Latest release: over 2 years ago - 11 dependent packages - 394 stars on GitHub
ImageQuilting 0.23.1
Fast image quilting simulation solver for the GeoStats.jl framework
65 versions - Latest release: 4 months ago - 41 stars on GitHub
ThreeBodyDecays 0.11.2
Builder of the three-body decay model using cascade approach
8 versions - Latest release: about 1 month ago - 0 stars on GitHub
NeuroAnalysis 1.2.2
Neural Signal Analysis
7 versions - Latest release: 2 months ago - 11 stars on GitHub
ForeignCallbacks 0.1.1
2 versions - Latest release: 3 months ago - 1 dependent package - 21 stars on GitHub
BrazilFinancialData 0.1.4
6 versions - Latest release: 9 months ago - 6 stars on GitHub
EnzymeTestUtils 0.1.7
Julia bindings for the Enzyme automatic differentiator
8 versions - Latest release: about 1 month ago - 358 stars on GitHub
MCAnalyzer 0.3.3
A set of tools for machine code analyzing of Julia code
7 versions - Latest release: over 1 year ago - 45 stars on GitHub
ExtendableFEM 0.4.0
High Level API Finite Element Methods based on ExtendableGrids and ExtendableFEMBase
4 versions - Latest release: about 1 month ago - 3 stars on GitHub
WannierIO 0.2.6
A Julia package for reading/writing wannier90 file formats
8 versions - Latest release: 2 months ago - 1 dependent package - 6 stars on GitHub
BasisSets 0.1.2
Package to parse Basis Sets from Basis Set Exchange API
3 versions - Latest release: 9 months ago - 6 stars on GitHub
ODINN 0.1.0
Global glacier model using Universal Differential Equations for climate-glacier interactions
1 version - Latest release: about 2 years ago - 49 stars on GitHub
ADRIA 0.10.0
ADRIA: Adaptive Dynamic Reef Intervention Algorithms. A multi-criteria decision support platform ...
8 versions - Latest release: 6 months ago - 9 stars on GitHub
Top 2.4% on juliahub.com
PowerModels 0.21.1
A Julia/JuMP Package for Power Network Optimization
65 versions - Latest release: 3 months ago - 34 dependent packages - 5 dependent repositories - 355 stars on GitHub
WaterModels 0.9.0 removed
A Julia/JuMP Package for Water Distribution Network Optimization
10 versions - Latest release: about 2 years ago - 1 dependent package - 67 stars on GitHub
FlexPlan 0.3.1
Open-source Julia tool for transmission and distribution expansion planning considering storage a...
7 versions - Latest release: 12 months ago - 1 dependent package - 18 stars on GitHub
CapacityExpansion 0.2.2
Capacity Expansion Problem Formulation for Julia
8 versions - Latest release: over 3 years ago - 22 stars on GitHub
PowerModelsAnnex 0.11.0
A PowerModels.jl Extension Package for Exploratory Work
37 versions - Latest release: 5 months ago - 17 stars on GitHub
StellarSpectraObservationFitting 0.1.3
Data-driven models for extremely precise radial velocity (EPRV) spectra
4 versions - Latest release: about 1 year ago - 4 stars on GitHub
Schedulers 0.11.0
Elastic and fault tolerant parallel map and parallel map reduce methods. Part of the COFII framew...
47 versions - Latest release: 3 months ago - 8 stars on GitHub
BetaDecayUtils 1.1.1
3 versions - Latest release: 3 months ago - 0 stars on GitHub
RegularizedCovarianceMatrices 0.1.3
Regularized covariance matrices estimators
4 versions - Latest release: 11 months ago - 1 dependent package - 5 stars on GitHub
HyperbolicCrossApprox 0.3.1
A Julia package to approximate multivariate continuous functions using a hyperbolic cross.
21 versions - Latest release: about 1 month ago - 1 dependent package - 2 stars on GitHub
PiecewiseLinearApprox 0.1.10
Julia code to perform piecewise linear interpolation in an arbitrary number of dimensions.
11 versions - Latest release: over 1 year ago - 1 dependent package - 2 stars on GitHub
Tsunami 0.1.7
Neural network training, fast and easy.
8 versions - Latest release: 8 months ago - 21 stars on GitHub
ReferenceFiniteElements 0.11.2
26 versions - Latest release: 3 months ago - 2 dependent packages
ChebyshevApprox 0.4.1
A Julia package to approximate multivariate continuous functions using Chebyshev polynomials.
26 versions - Latest release: about 1 month ago - 3 dependent packages - 25 stars on GitHub
OBOParse 0.0.1
Open Biomedical Ontologies (OBO) file parser
1 version - Latest release: over 5 years ago - 5 stars on GitHub