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@bioscript/seq-utils

Core sequence manipulation utilities for DNA/RNA operations: conversion, complement, reverse complement, k-mer analysis, minimizers, and De Bruijn graphs.

Ecosystem
npmjs.org
Latest Release
0.2.0
about 1 month ago
Versions
2
Downloads
99 last month
@bioscript/seq-format 0.1.0
Bioinformatics file format converters and parsers (GenBank, EMBL, GFF/GTF, BED, VCF, SAM/BAM)
1 version - Latest release: about 1 month ago - 1 stars on GitHub - 1 maintainer
@bioscript/seq-align 0.1.0
Pairwise sequence alignment algorithms (Needleman-Wunsch, Smith-Waterman) with BLOSUM and PAM sco...
1 version - Latest release: about 1 month ago - 1 maintainer
@bioscript/seq-translate 0.1.1
Efficient sequence translation utilities supporting all NCBI genetic code tables.
2 versions - Latest release: about 1 month ago - 144 downloads last month - 1 maintainer
@bioscript/seq-stream 0.1.1
Streaming parser/writer for FASTA and FASTQ files with quality score conversion and statistics
1 version - Latest release: about 2 months ago - 134 downloads last month - 1 maintainer
Links
Registry npmjs.org
Source Repository
Homepage Homepage
JSON API View JSON
CodeMeta codemeta.json
Package Details
PURL pkg:npm/%40bioscript/seq-utils
spec
License MIT
Namespace bioscript
First Release about 2 months ago
Last Synced 7 days ago
Keywords
bioinformatics sequence dna rna complement reverse-complement utilities kmers minimizers debruijn-graph rolling-hash syncmers super-kmers