Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "cell" keyword
lclayout 0.0.18
CMOS standard-cell layout generator.3 versions - Latest release: 4 months ago - 1 dependent repositories - 25 downloads last month - 9,803 stars on GitHub - 1 maintainer
hitips 1.0.6
HiTIPS: High-Throughput Image Processing Software for FISH data analysis33 versions - Latest release: 12 days ago - 338 downloads last month - 1 stars on GitHub - 1 maintainer
ap-features 2023.7.4
Package to compute features of traces from action potential models42 versions - Latest release: 7 months ago - 3 dependent packages - 1 dependent repositories - 2.07 thousand downloads last month - 6 stars on GitHub - 1 maintainer
pytfm 1.3.5
traction force microscopy and monolayer stress microscopy of cell sheets and isolated patches6 versions - Latest release: about 2 years ago - 1 dependent repositories - 60 downloads last month - 21 stars on GitHub - 1 maintainer
fm-track 1.0.0
Feature-based fiducial marker tracking software for applications in cell mechanics1 version - Latest release: over 4 years ago - 1 dependent repositories - 9 downloads last month - 5 stars on GitHub - 1 maintainer
picotalk 0.0.24
Simple voice call tool.4 versions - Latest release: 5 months ago - 18 downloads last month - 5 stars on codeberg.org - 1 maintainer
stomics3d 0.1.1
A web server for visualization of spatial-temporal single cell transcriptomics data1 version - Latest release: about 1 month ago - 45 downloads last month - 1 maintainer
scicast 0.8.27
scicast: Single Cell Iterative Clustering and Statistical Testing. A package for interrogating si...16 versions - Latest release: about 7 years ago - 1 dependent repositories - 376 downloads last month - 5 stars on GitHub - 1 maintainer
lctime 0.0.24
CMOS standard-cell characterization kit.9 versions - Latest release: about 1 month ago - 1 dependent repositories - 83 downloads last month - 1 stars on codeberg.org - 1 maintainer
librecell-common 0.0.16
Common utility functions for LibreCell suite.10 versions - Latest release: about 1 month ago - 3 dependent packages - 3 dependent repositories - 90 downloads last month - 4 stars on codeberg.org - 1 maintainer
librecell-layout 0.0.23
DEPRECATED - use `lclayout` package instead - CMOS standard-cell layout generator.9 versions - Latest release: about 1 month ago - 1 dependent package - 2 dependent repositories - 176 downloads last month - 0 stars on codeberg.org - 1 maintainer
librecell-lib 0.0.23
DEPRECATED - use `lctime` - CMOS standard-cell characterization kit.12 versions - Latest release: about 1 month ago - 1 dependent package - 2 dependent repositories - 251 downloads last month - 1 stars on codeberg.org - 1 maintainer
librecell 0.0.23
DEPRECATED - use `lctime` and `lclayout` packages - CMOS layout generator and characterization.10 versions - Latest release: about 1 month ago - 1 dependent repositories - 181 downloads last month - 4 stars on codeberg.org - 1 maintainer
cell-data-loader 0.0.7
Converts general images of cells into formats and labels for deep learning pipelines7 versions - Latest release: 7 days ago - 183 downloads last month - 0 stars on GitHub - 1 maintainer
mask2bbox 0.0.18
Gets the bounding boxes from a mask file.18 versions - Latest release: 3 months ago - 1 dependent package - 155 downloads last month - 1 maintainer
ifpd2q 1.0.4
An iFISH probe design pipeline (II)5 versions - Latest release: 3 months ago - 2 dependent packages - 72 downloads last month - 0 stars on GitHub - 1 maintainer
gridengine-framework 0.8.5
A framework for generating and manipulating grid-based game worlds75 versions - Latest release: 20 days ago - 876 downloads last month - 2 stars on GitHub - 1 maintainer
firetitipylib 1.5.7
Python libraries used as support/tools.18 versions - Latest release: 8 months ago - 1 dependent repositories - 65 downloads last month - 1 maintainer
a-pandas-ex-obj-into-cell 0.12
Puts objects into cells / columns of a Pandas Dataframe3 versions - Latest release: over 1 year ago - 2 dependent packages - 197 downloads last month - 0 stars on GitHub - 1 maintainer
cellprofiler-library-nightly 5.0.0.dev65
cellprofiler-lirary implements CellProfiler's image processing and mathematical code, and is usab...1 version - Latest release: 20 days ago - 2 dependent packages - 857 stars on GitHub - 1 maintainer
cellprofiler-core-nightly 5.0.0.dev65
cellprofiler-core implements the bulk of CellProfiler's non-gui functionality1 version - Latest release: 20 days ago - 1 dependent package - 857 stars on GitHub - 1 maintainer
ccapi 0.1.0
Python API for Cell Collective1 version - Latest release: almost 2 years ago - 1 dependent package - 2 dependent repositories - 30 downloads last month - 12 stars on GitHub - 1 maintainer
django_phone_confirmation 0.3.7
A Django app to validate cell phone numbers through SMS messages and REST.8 versions - Latest release: almost 6 years ago - 33 downloads last month - 4 stars on GitHub - 1 maintainer
tree.network 0.0.1
Fast implementation of trees from the mathematics of graphs1 version - Latest release: about 1 month ago - 98 downloads last month - 1 maintainer
bcells 1.0.3
Analysis of videos of cells with respect to their change in brightness over time.4 versions - Latest release: 4 months ago - 32 downloads last month - 1 maintainer
chargrid 0.0.2
An implementation of gridengine_framework and the CharActor that combines the two1 version - Latest release: 7 months ago - 5 downloads last month - 0 stars on GitHub - 1 maintainer
ensc 0.0.4
ensc4 versions - Latest release: 6 months ago - 2 dependent packages - 27 downloads last month - 1 maintainer
openmc-cell-segmenter 0.1.1
todo2 versions - Latest release: 8 months ago - 20 downloads last month - 2 stars on GitHub - 2 maintainers
stereosite 1.1.5
Analysis spatial transcriptomics data12 versions - Latest release: 2 months ago - 32 downloads last month - 15 stars on GitHub - 1 maintainer
epitools 0.0.12
Quantifying 2D cell shape and epithelial tissue dynamics12 versions - Latest release: 9 months ago - 162 downloads last month - 6 stars on GitHub - 1 maintainer
degex 0.0.24
Detect Gene Expression in Single-CEll data24 versions - Latest release: 11 months ago - 1 dependent package - 63 downloads last month - 0 stars on GitHub - 1 maintainer
cell-analysis-tools 1.0.1
cell analysis tools14 versions - Latest release: 4 months ago - 1 dependent repositories - 124 downloads last month - 2 stars on GitHub - 3 maintainers
gctime 0.0.17
CMOS standard-cell characterization kit.1 version - Latest release: about 2 years ago - 1 dependent repositories - 9 downloads last month - 0 stars on codeberg.org - 1 maintainer
xl-link 0.133
Excel spreadsheets made easy through Pandas magic6 versions - Latest release: over 5 years ago - 1 dependent repositories - 56 downloads last month - 9 stars on GitHub - 1 maintainer
wc-test 0.0.1
Methods for testing whole-cell knowledge bases and models1 version - Latest release: 9 months ago - 1 dependent repositories - 0 stars on GitHub - 2 maintainers
wc-sim 0.0.1
Sequential whole-cell model simulator1 version - Latest release: 9 months ago - 1 dependent repositories - 6 stars on GitHub - 2 maintainers
wc-onto 0.0.2
Ontology for whole-cell modeling1 version - Latest release: about 4 years ago - 1 dependent repositories - 36 downloads last month - 1 stars on GitHub - 2 maintainers
rnascrutiny 1.3
Tool for simulating and analyzing single-cell RNA-sequencing data.13 versions - Latest release: over 6 years ago - 1 dependent repositories - 8 downloads last month - 1 maintainer
radiantkit 0.0.1
Radial Image Analysis Toolkit1 version - Latest release: over 5 years ago - 1 dependent repositories - 12 downloads last month - 2 stars on GitHub - 1 maintainer
pymatcher 0.0.0
Manifold Alignment to Characterize Experimental Relationships1 version - Latest release: almost 7 years ago - 1 dependent repositories - 10 downloads last month - 21 stars on GitHub - 1 maintainer
pycellsewew 1.2.8
A simple and flexible Python3 library for Cell1 version - Latest release: over 3 years ago - 1 dependent repositories - 11 downloads last month - 1 maintainer
pycell 1.2.8
A simple and flexible Python3 library for Cell5 versions - Latest release: over 3 years ago - 1 dependent repositories - 32 downloads last month - 1 maintainer
pniggli 0.1.3
Structures of Alloys Generation And Recognition5 versions - Latest release: about 5 years ago - 1 dependent repositories - 290 downloads last month - 1 maintainer
ifpd 2.1.1
An iFISH probe design pipeline, with web interface included.21 versions - Latest release: over 2 years ago - 1 dependent repositories - 82 downloads last month - 8 stars on GitHub - 1 maintainer
gpseqc 2.3.6
GPSeq-based centrality estimation.4 versions - Latest release: almost 5 years ago - 1 dependent repositories - 16 downloads last month - 2 stars on GitHub - 1 maintainer
fish-prode 1.1.0
A FISH probe design web interface.3 versions - Latest release: over 5 years ago - 1 dependent repositories - 51 downloads last month - 8 stars on GitHub - 1 maintainer
ecdh 0.1.5
ElectroChemical Data Handler5 versions - Latest release: over 1 year ago - 1 dependent repositories - 63 downloads last month - 3 stars on GitHub - 1 maintainer
dropseqpipe 0.23a0
A drop-seq pipeline2 versions - Latest release: almost 7 years ago - 1 dependent repositories - 13 downloads last month - 145 stars on GitHub - 1 maintainer
dinglab-pollock 0.2.1
A tool for single cell classification and characterization.14 versions - Latest release: over 2 years ago - 1 dependent repositories - 75 downloads last month - 2 stars on GitHub - 1 maintainer
cytoskeleton-analyser 1.6.5
Examines simulated cell microtubules1 version - Latest release: about 3 years ago - 1 dependent repositories - 13 downloads last month - 0 stars on GitHub - 1 maintainer
cycifaap 5.7.7
Cyclic ImmunoFluoresence (cycIF) Automatic Analysis Pipeline23 versions - Latest release: 11 months ago - 1 dependent repositories - 92 downloads last month - 1 maintainer
compiler-magics 1.0.1 💰
Distributing a custom cell magic to do compilation2 versions - Latest release: over 2 years ago - 1 dependent repositories - 28 downloads last month - 0 stars on GitHub - 1 maintainer
cellsystem 0.4.2
An agent-based framework for the simulation of biological cell systems and more.6 versions - Latest release: over 5 years ago - 1 dependent repositories - 53 downloads last month - 6 stars on GitHub - 1 maintainer
cellsaga 0.0.2
Cell Saga Module2 versions - Latest release: over 2 years ago - 1 dependent repositories - 11 downloads last month - 1 maintainer
celldetection 0.4.5
Cell Detection with PyTorch.12 versions - Latest release: 6 months ago - 1 dependent repositories - 226 downloads last month - 110 stars on GitHub - 1 maintainer
cell_counting 0.1.8
Tools for counting cell colonies on plates of growth medium.9 versions - Latest release: about 6 years ago - 60 downloads last month - 1 maintainer
biotracks 0.5.0
Data package representation for cell migration tracking data7 versions - Latest release: almost 5 years ago - 1 dependent repositories - 29 downloads last month - 12 stars on GitHub - 3 maintainers
cylinter 0.0.45
CyLinter45 versions - Latest release: about 1 year ago - 1 dependent repositories - 392 downloads last month - 20 stars on GitHub - 2 maintainers
celulartable 0.0.1
Tables made of cells for console.1 version - Latest release: over 1 year ago - 17 downloads last month - 0 stars on GitHub - 1 maintainer
bluecellulab 2.6.12
Biologically detailed neural network simulations and analysis.102 versions - Latest release: 13 days ago - 1 dependent package - 1 dependent repositories - 2.58 thousand downloads last month - 8 stars on GitHub - 1 maintainer
featherplot 0.0.6
featherplot6 versions - Latest release: 10 months ago - 4 downloads last month - 0 stars on GitHub - 1 maintainer
akey 0.0.5
akey5 versions - Latest release: about 2 months ago - 1 dependent package - 194 downloads last month - 1 maintainer
cell-tracking-bc 2024.1 💰
Base Classes for Cell Tracking in Microscopy89 versions - Latest release: 4 months ago - 739 downloads last month - 6,321 stars on GitHub - 1 maintainer
xlsxopera 1.1
Work on .xlsx files.2 versions - Latest release: over 1 year ago - 23 downloads last month - 0 stars on GitHub - 1 maintainer
cellprofiler-nightly 5.0.0.dev65
CellProfiler is a free open-source software designed to enable biologists without training in com...1 version - Latest release: 20 days ago - 857 stars on GitHub - 1 maintainer
ifpd2 1.0.1a1
An iFISH probe design pipeline (II)2 versions - Latest release: over 2 years ago - 1 dependent repositories - 16 downloads last month - 2 stars on GitHub - 1 maintainer
geocell 0.9.0
Location estimation using GSM Cells with Google Maps Geolocation API1 version - Latest release: over 7 years ago - 1 dependent repositories - 10 downloads last month - 8 stars on GitHub - 1 maintainer
actk 0.2.2
Automated Cell Toolkit6 versions - Latest release: over 3 years ago - 75 downloads last month - 23 stars on GitHub - 1 maintainer
pygpseq 3.4.1
A GPSeq image analysis package6 versions - Latest release: over 2 years ago - 1 dependent repositories - 26 downloads last month - 2 stars on GitHub - 1 maintainer
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