Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
pypi.org "dimensionality-reduction" keyword
Top 4.5% on pypi.org
11 versions - Latest release: about 1 month ago - 2 dependent packages - 7 dependent repositories - 3.49 thousand downloads last month - 195 stars on GitHub - 3 maintainers
palantir 1.3.3
Palantir for modeling continuous cell state and cell fate choices in single cell data11 versions - Latest release: about 1 month ago - 2 dependent packages - 7 dependent repositories - 3.49 thousand downloads last month - 195 stars on GitHub - 3 maintainers
Top 9.5% on pypi.org
30 versions - Latest release: about 2 months ago - 2 dependent packages - 2 dependent repositories - 1.13 thousand downloads last month - 82 stars on GitHub - 1 maintainer
xeofs 2.3.2
Comprehensive EOF analysis in Python with xarray: A versatile, multidimensional, and scalable too...30 versions - Latest release: about 2 months ago - 2 dependent packages - 2 dependent repositories - 1.13 thousand downloads last month - 82 stars on GitHub - 1 maintainer
cluster-shapley 0.1.6
Explaining dimensionality reduction using SHAP values3 versions - Latest release: over 1 year ago - 1 dependent repositories - 80 downloads last month - 47 stars on GitHub - 1 maintainer
lensed-umap 0.1.1
Untangle UMAP with lenses.2 versions - Latest release: 2 days ago - 108 downloads last month - 1 stars on GitHub - 1 maintainer
scikit-fda-sim 0.7.1
Functional Data Analysis Python package.1 version - Latest release: over 1 year ago - 24 downloads last month - 272 stars on GitHub - 1 maintainer
Top 2.7% on pypi.org
15 versions - Latest release: 3 months ago - 9 dependent packages - 14 dependent repositories - 57.4 thousand downloads last month - 272 stars on GitHub - 1 maintainer
scikit-fda 0.9.1
Functional Data Analysis Python package.15 versions - Latest release: 3 months ago - 9 dependent packages - 14 dependent repositories - 57.4 thousand downloads last month - 272 stars on GitHub - 1 maintainer
Top 0.6% on pypi.org
40 versions - Latest release: about 1 month ago - 370 dependent packages - 2,209 dependent repositories - 1.22 million downloads last month - 6,930 stars on GitHub - 3 maintainers
umap-learn 0.5.6
Uniform Manifold Approximation and Projection40 versions - Latest release: about 1 month ago - 370 dependent packages - 2,209 dependent repositories - 1.22 million downloads last month - 6,930 stars on GitHub - 3 maintainers
tsnex 0.0.1
Minimal t-distributed stochastic neighbor embedding (t-SNE) implementation in JAX.1 version - Latest release: 2 months ago - 16 downloads last month - 0 stars on GitHub - 1 maintainer
slisemap 1.6.2
SLISEMAP: Combine local explanations with supervised dimensionality reduction17 versions - Latest release: 16 days ago - 1 dependent package - 1 dependent repositories - 242 downloads last month - 15 stars on GitHub - 1 maintainer
sliced 0.7.0
Toolbox for sufficient dimension reduction (SDR).6 versions - Latest release: almost 6 years ago - 1 dependent package - 1 dependent repositories - 5.51 thousand downloads last month - 19 stars on GitHub - 1 maintainer
evomap 0.3.1
A Python Toolbox for Mapping Evolving Relationship Data2 versions - Latest release: 3 days ago - 178 downloads last month - 88 stars on GitHub - 1 maintainer
diffred 0.1.3
Official Implementation of "DiffRed: Dimensionality Reduction guided by stable rank"3 versions - Latest release: 2 months ago - 44 downloads last month - 9 stars on GitHub - 1 maintainer
Top 5.1% on pypi.org
9 versions - Latest release: about 6 years ago - 5 dependent packages - 12 dependent repositories - 5.75 thousand downloads last month - 100 stars on GitHub - 1 maintainer
pymorton 1.0.5
A lightweight morton coder with lat/long support.9 versions - Latest release: about 6 years ago - 5 dependent packages - 12 dependent repositories - 5.75 thousand downloads last month - 100 stars on GitHub - 1 maintainer
Top 3.6% on pypi.org
20 versions - Latest release: over 1 year ago - 6 dependent packages - 12 dependent repositories - 8.63 thousand downloads last month - 516 stars on GitHub - 1 maintainer
pymde 0.1.18
Minimum-Distortion Embedding20 versions - Latest release: over 1 year ago - 6 dependent packages - 12 dependent repositories - 8.63 thousand downloads last month - 516 stars on GitHub - 1 maintainer
Top 3.5% on pypi.org
15 versions - Latest release: about 3 years ago - 13 dependent packages - 22 dependent repositories - 2.41 thousand downloads last month - 318 stars on GitHub - 1 maintainer
magic-impute 3.0.0
MAGIC15 versions - Latest release: about 3 years ago - 13 dependent packages - 22 dependent repositories - 2.41 thousand downloads last month - 318 stars on GitHub - 1 maintainer
Top 2.9% on pypi.org
36 versions - Latest release: 11 months ago - 18 dependent packages - 33 dependent repositories - 2.73 thousand downloads last month - 443 stars on GitHub - 1 maintainer
phate 1.0.11
PHATE36 versions - Latest release: 11 months ago - 18 dependent packages - 33 dependent repositories - 2.73 thousand downloads last month - 443 stars on GitHub - 1 maintainer
Top 2.3% on pypi.org
24 versions - Latest release: 6 months ago - 8 dependent packages - 38 dependent repositories - 28.1 thousand downloads last month - 1,361 stars on GitHub - 1 maintainer
opentsne 1.0.1
Extensible, parallel implementations of t-SNE24 versions - Latest release: 6 months ago - 8 dependent packages - 38 dependent repositories - 28.1 thousand downloads last month - 1,361 stars on GitHub - 1 maintainer
Top 2.1% on pypi.org
4 versions - Latest release: 3 months ago - 12 dependent packages - 19 dependent repositories - 22.5 thousand downloads last month - 1,391 stars on GitHub - 1 maintainer
minisom 2.3.2
Minimalistic implementation of the Self Organizing Maps (SOM)4 versions - Latest release: 3 months ago - 12 dependent packages - 19 dependent repositories - 22.5 thousand downloads last month - 1,391 stars on GitHub - 1 maintainer
adnmtf 0.1.165
Non-negative Matrix and Tensor Factorization33 versions - Latest release: 17 days ago - 1 dependent package - 1 dependent repositories - 242 downloads last month - 2 stars on GitHub - 2 maintainers
gbfs 0.2.1
Graph-Based Feature-Selection Algorithms4 versions - Latest release: 4 days ago - 155 downloads last month - 7 stars on GitHub - 1 maintainer
tsimcne 0.3.12
Visualization tool for unsupervised image visualization (ICLR 2023)13 versions - Latest release: about 2 months ago - 119 downloads last month - 97 stars on GitHub - 1 maintainer
knockofforigins 0.1.4
This repository is dedicated to implementing the methodologies from the 2015 paper "False Discove...5 versions - Latest release: 4 days ago - 1.15 thousand downloads last month - 0 stars on GitHub - 1 maintainer
multi-mst 0.1.2
Minimum spanning tree based manifold approximations.3 versions - Latest release: about 1 month ago - 242 downloads last month - 1 stars on GitHub - 1 maintainer
cat-scaling 2024.3.1b0
Build Catalysts Adsorption Energy Scaling Relations2 versions - Latest release: 2 months ago - 20 downloads last month - 0 stars on GitHub - 1 maintainer
torchdr 0
Torch Dimensionality Reduction Library1 version - Latest release: 3 months ago - 13 downloads last month - 2 stars on GitHub - 1 maintainer
nimble-raccoon 0.1.1
A slim and fast implementation of the RACCOON clustering library.2 versions - Latest release: 5 months ago - 19 downloads last month - 1 maintainer
msmbuilder2022 3.8.6
MSMBuilder: Statistical models for Biomolecular Dynamics2 versions - Latest release: 7 months ago - 13 downloads last month - 151 stars on GitHub - 1 maintainer
ccsf 1.0.8
Leveraging cell-cell similarity from gene expression data for high-performance spatial and tempor...6 versions - Latest release: 9 months ago - 54 downloads last month - 0 stars on GitHub - 1 maintainer
interpretable-tsne 0.0.3
Implementation of the gradient-based t-SNE sttribution method described in our GLBIO oral present...3 versions - Latest release: 24 days ago - 143 downloads last month - 0 stars on GitHub - 1 maintainer
pcax 0.1.0
Minimal Principal Component Analysis (PCA) implementation using JAX.1 version - Latest release: 12 months ago - 48 downloads last month - 8 stars on GitHub - 1 maintainer
mafese 0.1.9
MAFESE: Metaheuristic Algorithm for Feature Selection - An Open Source Python Library10 versions - Latest release: 9 months ago - 242 downloads last month - 44 stars on GitHub - 1 maintainer
zadu 0.1.1
A Python Toolkit for Evaluating the Reliability of Dimensionality Reduction Embeddings9 versions - Latest release: 7 months ago - 111 downloads last month - 24 stars on GitHub - 1 maintainer
tphate 0.0.5
Temporal PHATE (TPHATE) is a python package for learning robust manifold representations of times...4 versions - Latest release: about 1 year ago - 1 dependent repositories - 21 downloads last month - 18 stars on GitHub - 1 maintainer
raccoon-cluster 0.5.1
Scale-adaptive clustering in Python1 version - Latest release: almost 2 years ago - 23 downloads last month - 3 stars on GitHub - 1 maintainer
sortedness 2.231107.1
Measures of projection quality16 versions - Latest release: 6 months ago - 1 dependent repositories - 151 downloads last month - 2 stars on GitHub - 1 maintainer
umato 0.1.2
Python Implementation of UMATO (Uniform Manifold Approximation with Two-Phase Optimization)7 versions - Latest release: about 1 year ago - 1 dependent repositories - 84 downloads last month - 104 stars on GitHub - 1 maintainer
ttra 0.1.1
Implementation of Time-proof Time-series Reduction Algorithm7 versions - Latest release: almost 2 years ago - 15 downloads last month - 1 stars on GitHub - 1 maintainer
snc 0.2.1
Implementation of Steadiness & Cohesiveness8 versions - Latest release: about 1 year ago - 1 dependent package - 24 downloads last month - 21 stars on GitHub - 1 maintainer
topometry 0.0.4
A comprehensive dimensional reduction framework to recover latent information from data.26 versions - Latest release: over 2 years ago - 3 dependent repositories - 184 downloads last month - 87 stars on GitHub - 1 maintainer
timecorr 0.1.7
Compute dynamic correlations, dynamic higher-order correlations, and dynamic graph theoretic meas...6 versions - Latest release: 5 months ago - 1 dependent repositories - 56 downloads last month - 38 stars on GitHub - 1 maintainer
stad 2.0.1
Dimensionality reduction through Simplified Topological Abstraction of Data2 versions - Latest release: over 4 years ago - 1 dependent repositories - 21 downloads last month - 4 stars on GitHub - 1 maintainer
Top 10.0% on pypi.org
12 versions - Latest release: over 1 year ago - 1 dependent repositories - 523 downloads last month - 153 stars on GitHub - 1 maintainer
simpsom 2.0.2
Simple Self-Organizing Maps in Python12 versions - Latest release: over 1 year ago - 1 dependent repositories - 523 downloads last month - 153 stars on GitHub - 1 maintainer
pymds 0.1.6
Metric multidimensional scaling in python.7 versions - Latest release: almost 6 years ago - 1 dependent repositories - 49 downloads last month - 4 stars on GitHub - 1 maintainer
pre-ml 1.0.1
pre-ml an optimization tool for machine learning!1 version - Latest release: over 6 years ago - 1 dependent repositories - 13 downloads last month - 4 stars on GitHub - 1 maintainer
nystrompca 1.0.2
Kernel PCA with the NystrΓΆm method3 versions - Latest release: over 2 years ago - 1 dependent repositories - 37 downloads last month - 11 stars on GitHub - 1 maintainer
neural-map 1.0.0
NeuralMap is a data analysis tool based on Self-Organizing Maps8 versions - Latest release: over 3 years ago - 1 dependent repositories - 29 downloads last month - 8 stars on GitHub - 1 maintainer
ncvis 1.5.13
Noise contrastive data visualization23 versions - Latest release: 6 months ago - 1 dependent repositories - 75 downloads last month - 51 stars on GitHub - 1 maintainer
mycorrhiza 0.0.28
Mycorrhiza population assignment tools.25 versions - Latest release: almost 5 years ago - 1 dependent repositories - 196 downloads last month - 5 stars on GitHub - 1 maintainer
Top 7.8% on pypi.org
15 versions - Latest release: about 7 years ago - 9 dependent repositories - 173 downloads last month - 151 stars on GitHub - 4 maintainers
msmbuilder 3.8.0
MSMBuilder: Statistical models for Biomolecular Dynamics15 versions - Latest release: about 7 years ago - 9 dependent repositories - 173 downloads last month - 151 stars on GitHub - 4 maintainers
metrics4mdp 0.1.2
Quantitative metrics of Multidimensional Projections (MDP) in Python3 versions - Latest release: about 3 years ago - 1 dependent repositories - 13 downloads last month - 25 stars on GitHub - 1 maintainer
humap 0.2.8
Hierarchical Uniform Manifold Approximation and Projection12 versions - Latest release: 11 months ago - 1 dependent repositories - 56 downloads last month - 209 stars on GitHub - 1 maintainer
flameplot 1.1.0 π°
flameplot is a python package for the quantification of local similarity across two maps or embed...7 versions - Latest release: over 1 year ago - 1 dependent repositories - 101 downloads last month - 8 stars on GitHub - 1 maintainer
fastlapmap 0.1.2
Fast Laplacian Eigenmaps for dimensionality reduction.3 versions - Latest release: over 2 years ago - 1 dependent repositories - 33 downloads last month - 21 stars on GitHub - 1 maintainer
ezancestry 0.1.0
Easily predict and visualize genetic ancestry. Evaluate custom ancestry-informative SNP sets.8 versions - Latest release: 3 months ago - 1 dependent package - 1 dependent repositories - 172 downloads last month - 56 stars on GitHub - 1 maintainer
enstop 0.2.6
Ensemble topic modelling with pLSA14 versions - Latest release: over 2 years ago - 3 dependent repositories - 46 downloads last month - 109 stars on GitHub - 3 maintainers
encodermap 2.0.1
python library for dimensionality reduction12 versions - Latest release: over 4 years ago - 1 dependent repositories - 85 downloads last month - 26 stars on GitHub - 1 maintainer
easyae-samuel.revolinski 0.0.0
easy way for non-linear dimensionality increase or reduction1 version - Latest release: about 5 years ago - 16 downloads last month - 0 stars on GitHub - 1 maintainer
easyae 0.0.0
easy way for non-linear dimensionality increase or reduction1 version - Latest release: about 5 years ago - 1 dependent repositories - 15 downloads last month - 0 stars on GitHub - 1 maintainer
drfr 0.9.6
A Small Package for Use of Research12 versions - Latest release: about 4 years ago - 1 dependent repositories - 30 downloads last month - 6,930 stars on GitHub - 1 maintainer
dpca 1.0.5
Implements Demixed Principal Components Analysis3 versions - Latest release: almost 4 years ago - 1 dependent repositories - 62 downloads last month - 262 stars on GitHub - 1 maintainer
dimdrop 0.1.0
Providing some dimensionality reduction methods using Machine Learning1 version - Latest release: almost 5 years ago - 1 dependent repositories - 8 downloads last month - 1 stars on GitHub - 1 maintainer
dbmap 1.2.0
dbMAP: diffusion metrics, graphs and layouts for machine-learning8 versions - Latest release: about 3 years ago - 1 dependent package - 1 dependent repositories - 100 downloads last month - 44 stars on GitHub - 1 maintainer
cne-learn 0.0.dev0
Contrastive neighbor embeddings (CNE) for dimensionality reduction and clustering1 version - Latest release: over 2 years ago - 13 downloads last month - 151 stars on GitHub - 1 maintainer
Top 9.6% on pypi.org
9 versions - Latest release: over 1 year ago - 2 dependent repositories - 419 downloads last month - 95 stars on GitHub - 1 maintainer
chemplot 1.2.1
A python library for chemical space visualization.9 versions - Latest release: over 1 year ago - 2 dependent repositories - 419 downloads last month - 95 stars on GitHub - 1 maintainer
celltometry 0.0.1
Learn single-cell data structure through topological bases, graphs and layouts1 version - Latest release: about 2 years ago - 24 downloads last month - 1 stars on GitHub - 1 maintainer
ppca-rs 0.5.1
Python+Rust implementation of the Probabilistic Principal Component Analysis model11 versions - Latest release: 12 months ago - 285 downloads last month - 34 stars on GitHub - 1 maintainer
augmented-pca 0.2.0
Python implementations of supervised and adversarial linear factor models.1 version - Latest release: over 2 years ago - 1 dependent repositories - 22 downloads last month - 10 stars on GitHub - 1 maintainer
mica 0.2.2
Mutual Information-based Clustering Analysis tool designed for scRNA-seq data2 versions - Latest release: almost 2 years ago - 1 dependent repositories - 11 downloads last month - 1 stars on GitHub - 1 maintainer
pyldle2 0.1.21
Low Distortion Local Eigenmaps and its variations.29 versions - Latest release: 9 months ago - 230 downloads last month - 10 stars on GitHub - 1 maintainer
pysef 0.2.10
Package that implements the Similarity Embedding Framework on top of the PyTorch library.11 versions - Latest release: over 5 years ago - 1 dependent repositories - 77 downloads last month - 25 stars on GitHub - 1 maintainer
heatgeo 0.0.1
Heat geodesic embeddings1 version - Latest release: 11 months ago - 45 downloads last month - 6 stars on GitHub - 1 maintainer
multiscale-phate 0.0
multiscale_phate1 version - Latest release: over 3 years ago - 1 dependent repositories - 27 downloads last month - 43 stars on GitHub - 1 maintainer
selfsne 0.0.1
Self-Supervised Noise Embeddings (Self-SNE) for dimensionality reduction and clustering2 versions - Latest release: about 2 years ago - 1 dependent repositories - 11 downloads last month - 151 stars on GitHub - 1 maintainer
dimae 0.1.4
Dimensionality Autoencoder2 versions - Latest release: over 3 years ago - 1 dependent repositories - 23 downloads last month - 0 stars on GitHub - 1 maintainer
fabba 1.2.1
An efficient aggregation method for the symbolic representation of temporal data115 versions - Latest release: 3 months ago - 1 dependent repositories - 406 downloads last month - 27 stars on GitHub - 1 maintainer
dimensionality-reduction-package 1.0.0
Python package for plug and play dimensionality reduction techniques and data visualization in 2D...1 version - Latest release: over 1 year ago - 10 downloads last month - 3 stars on GitHub - 1 maintainer
drcomp 0.0.1a0
Dimensionality Reduction Comparison1 version - Latest release: over 1 year ago - 14 downloads last month - 1 stars on GitHub - 1 maintainer
adenine 0.1.4
A Data ExploratioN pIpeliNE6 versions - Latest release: about 7 years ago - 2 dependent repositories - 38 downloads last month - 15 stars on GitHub - 1 maintainer
pmpca 0.1.2
PCA for multivariate statistical process monitoring.3 versions - Latest release: over 1 year ago - 33 downloads last month - 0 stars on GitHub - 1 maintainer
Top 6.9% on pypi.org
31 versions - Latest release: over 1 year ago - 1 dependent package - 7 dependent repositories - 895 downloads last month - 315 stars on GitHub - 1 maintainer
ivis 2.0.9
Artificial neural network-driven visualization of high-dimensional data using triplets.31 versions - Latest release: over 1 year ago - 1 dependent package - 7 dependent repositories - 895 downloads last month - 315 stars on GitHub - 1 maintainer
testmsm 3.8.5
MSMBuilder: Statistical models for Biomolecular Dynamics6 versions - Latest release: about 2 years ago - 1 dependent repositories - 6 downloads last month - 151 stars on GitHub - 1 maintainer
scbean 0.5.6
integration15 versions - Latest release: 4 months ago - 2 dependent repositories - 157 downloads last month - 14 stars on GitHub - 1 maintainer
aroughcun 0.5.1 removed
Scale-adaptive clustering in Python1 version - Latest release: almost 2 years ago - 0 stars on GitHub
bsoid 0.1.3 removed
An open-source machine learning algorithm for parsing spatio-temporal patterns.1 version - Latest release: almost 4 years ago - 1 dependent repositories - 19 downloads last month - 158 stars on GitHub - 1 maintainer
Related Keywords
machine-learning
37
visualization
21
python
21
clustering
18
pca
11
umap
9
manifold-learning
9
data-visualization
9
unsupervised-learning
8
embedding
7
autoencoder
6
data-science
6
single-cell
5
machine-learning-algorithms
5
molecular-dynamics
4
reduction
4
machine learning
4
dimension-reduction
4
optimization
4
autoencoders
4
feature-extraction
4
big-data
4
analysis
4
computational-biology
4
tica
3
feature-selection
3
t-sne
3
msmbuilder
3
topological-data-analysis
3
dimensionality
3
tsne
3
hierarchical-clustering
3
pytorch
3
multi-scale
3
scale-adaptive
3
hmm
3
metrics
3
markov-model
3
keras
3
self-organizing-map
3
genomics
3
genetics
3
principal-component-analysis
3
gwas
3
classification
3
python3
3
dimensionality reduction
3
embedding-models
2
som
2
self-supervised-learning
2
pca-analysis
2
missing-data
2
graph-embedding
2
auto-encoder
2
neural-network
2
nearest-neighbors
2
denoising
2
contrastive-learning
2
principal component analysis
2
high-dimensional
2
ancestry
2
deep-learning
2
single-cell-rna-seq
2
auto-encoders
2
curves
2
alignment
2
single-cell-analysis
2
time-series
2
explainable-ai
2
unsupervised-machine-learning
2
unsupervised-clustering
2
unsupervised
2
spectral-clustering
2
graph-layout
2
mds
2
single-cell-genomics
2
spectral-analysis
2
scikit-learn
2
population-structure
2
nonlinear
2
nir
2
mutual-information
2
multidimensional-projection
2
ml
2
differential-evolution
2
knn
2
gpu
2
optimal-clusters
2
jax
2
data-analysis
2
statistics
2
smoothing
2
scikits
2
regression
2
registration
2
functions
2
functional-data-analysis
2
topic
1
tensorflow
1
model
1