pypi.org : data-dictionary-cui-mapping : 1.1.5
This package allows you to load in a data dictionary and map cuis to defined fields using either the UMLS API or MetaMap API from NLM, or a Semantic Search pipeline using Pinecone vector database.
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Dependencies
- cchardet >=2.1.7,<3.0.0
- coloredlogs >=15.0.1,<16.0.0
- hydra-core >=1.1.0
- omegaconf ==2.1.2
- openpyxl >=3.0.10
- pandas >=1.5.2
- pathlib >=1.0.1,<2.0.0
- pinecone-client >=2.2.1,<3.0.0
- python-dotenv ==0.21.1
- requests >=2.28.1
- requests-html >=0.10.0
- sentence-transformers >=2.2.2,<3.0.0
- transformers ==4.18.0