pypi.org : enformer-dna-diff : 1.0
This is a package for that combines DeepMind Enformer model with DNA Diffusion project
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Dependencies
- HTSeq ==2.0.2
- Jinja2 ==3.1.2
- Markdown ==3.4.3
- MarkupSafe ==2.1.2
- Pillow ==9.3.0
- PySocks *
- PyYAML ==6.0
- Pygments ==2.14.0
- Send2Trash ==1.8.0
- Werkzeug ==2.3.5
- absl-py ==1.4.0
- accelerate ==0.17.0
- anyio ==3.6.2
- appdirs ==1.4.4
- argon2-cffi ==21.3.0
- argon2-cffi-bindings ==21.2.0
- arrow ==1.2.3
- asttokens ==2.2.1
- astunparse ==1.6.3
- attrs ==21.4.0
- backcall ==0.2.0
- beautifulsoup4 ==4.11.2
- biofluff ==3.0.4
- biopython ==1.80
- biothings-client ==0.2.6
- bleach ==6.0.0
- bokeh ==3.0.3
- cachetools ==5.3.1
- certifi ==2023.5.7
- click ==8.1.3
- colorama ==0.4.6
- comm ==0.1.2
- conda ==23.1.0
- configparser ==5.3.0
- contourpy ==1.0.7
- cycler ==0.11.0
- debugpy ==1.6.6
- decorator ==5.1.1
- defusedxml ==0.7.1
- diskcache ==5.4.0
- einops ==0.6.0
- executing ==1.2.0
- fastjsonschema ==2.16.2
- feather-format ==0.4.1
- filelock ==3.9.0
- flatbuffers ==23.5.26
- fonttools ==4.38.0
- fqdn ==1.5.1
- gast ==0.4.0
- genomepy ==0.14.0
- gimmemotifs ==0.18.0
- google-auth ==2.19.1
- google-auth-oauthlib ==1.0.0
- google-pasta ==0.2.0
- grpcio ==1.54.2
- h5py ==3.8.0
- importlib-metadata ==6.0.0
- importlib-resources ==5.10.2
- ipdb ==0.13.11
- ipykernel ==6.21.1
- ipython ==8.10.0
- ipython-genutils ==0.2.0
- ipywidgets ==8.0.4
- isoduration ==20.11.0
- iteround ==1.0.4
- jax ==0.4.11
- jedi ==0.18.2
- joblib ==1.2.0
- jsonpointer ==2.3
- jsonschema ==4.17.3
- jupyter-client ==8.0.2
- jupyter-contrib-core ==0.4.2
- jupyter-contrib-nbextensions ==0.7.0
- jupyter-core ==5.2.0
- jupyter-events ==0.6.3
- jupyter-highlight-selected-word ==0.2.0
- jupyter-nbextensions-configurator ==0.6.1
- jupyter-server ==2.2.1
- jupyter-server-terminals ==0.4.4
- jupyterlab-pygments ==0.2.2
- jupyterlab-widgets ==3.0.5
- keras ==2.12.0
- kiwisolver ==1.4.4
- libclang ==16.0.0
- livelossplot ==0.5.5
- llvmlite ==0.39.1
- logomaker ==0.8
- loguru ==0.6.0
- lxml ==4.9.2
- matplotlib ==3.6.3
- matplotlib-inline ==0.1.6
- memory-efficient-attention-pytorch ==0.1.1
- mistune ==2.0.5
- mkl-fft ==1.3.1
- mkl-service ==2.4.0
- ml-dtypes ==0.2.0
- mygene ==3.2.2
- mysql-connector-python ==8.0.32
- nbclassic ==0.5.1
- nbclient ==0.7.2
- nbconvert ==7.2.9
- nbformat ==5.7.3
- nest-asyncio ==1.5.6
- norns ==0.1.6
- nose ==1.3.7
- notebook ==6.5.2
- notebook-shim ==0.2.2
- numba ==0.56.4
- numpy *
- nvidia-cublas-cu11 ==11.11.3.6
- nvidia-cudnn-cu11 ==8.6.0.163
- oauthlib ==3.2.2
- opt-einsum ==3.3.0
- packaging *
- palettable ==3.3.0
- pandas ==1.5.3
- pandocfilters ==1.5.0
- parso ==0.8.3
- patsy ==0.5.3
- pexpect ==4.8.0
- pickleshare ==0.7.5
- pkgutil-resolve-name ==1.3.10
- platformdirs ==3.0.0
- pluggy *
- pooch *
- prometheus-client ==0.16.0
- prompt-toolkit ==3.0.36
- protobuf ==3.20.3
- psutil ==5.9.4
- ptyprocess ==0.7.0
- pure-eval ==0.2.2
- pyBigWig ==0.3.18
- pyOpenSSL *
- pyarrow ==11.0.0
- pyasn1 ==0.5.0
- pyasn1-modules ==0.3.0
- pybedtools ==0.9.0
- pycosat *
- pycparser *
- pyfaidx ==0.7.1
- pyparsing ==3.0.9
- pyrsistent ==0.19.3
- pysam ==0.20.0
- python-dateutil ==2.8.2
- python-json-logger ==2.0.4
- pytz ==2022.7.1
- pyzmq ==25.0.0
- qnorm ==0.8.1
- requests *
- requests-oauthlib ==1.3.1
- rfc3339-validator ==0.1.4
- rfc3986-validator ==0.1.1
- rsa ==4.9
- ruamel.yaml *
- ruamel.yaml.clib *
- scikit-learn ==1.2.1
- scipy ==1.10.0
- seaborn ==0.12.2
- six *
- sniffio ==1.3.0
- soupsieve ==2.3.2.post1
- stack-data ==0.6.2
- statsmodels ==0.13.5
- tensorboard ==2.12.3
- tensorboard-data-server ==0.7.0
- tensorflow ==2.12.0
- tensorflow-estimator ==2.12.0
- tensorflow-hub ==0.13.0
- tensorflow-io-gcs-filesystem ==0.32.0
- termcolor ==2.3.0
- terminado ==0.17.1
- threadpoolctl ==3.1.0
- tinycss2 ==1.2.1
- tomli ==2.0.1
- toolz *
- torch ==1.13.1
- torchaudio ==0.13.1
- torchmetrics ==0.11.1
- torchvision ==0.14.1
- tornado ==6.2
- tqdm *
- traitlets ==5.9.0
- typing-extensions *
- uri-template ==1.2.0
- urllib3 ==1.24.3
- wcwidth ==0.2.6
- webcolors ==1.12
- webencodings ==0.5.1
- websocket-client ==1.5.1
- wget ==3.2
- widgetsnbextension ==4.0.5
- wrapt ==1.14.1
- xdg ==5.1.1
- xxhash ==3.2.0
- xyzservices ==2022.9.0
- zipp ==3.13.0
- zstandard *