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pypi.org : imagecodecs
Image transformation, compression, and decompression codecs
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- Homepage
- Documentation
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purl: pkg:pypi/imagecodecs
Keywords:
avif
, image
, jpeg
, jpeg-ls
, jpeg-xl
, jpeg-xr
, jpeg-xs
, jpeg2000
, lerc
, lz4
, lzf
, lzma
, lzw
, packbits
, python
, tiff
, ultrahdr
, webp
, zarr
, zfp
License: BSD-3-Clause
Latest release: 23 days ago
First release: over 6 years ago
Dependent packages: 166
Dependent repositories: 835
Downloads: 599,237 last month
Stars: 138 on GitHub
Forks: 27 on GitHub
Docker dependents: 530
Docker downloads: 354,415,843
Total Commits: 2148
Committers: 1
Average commits per author: 2148.0
Development Distribution Score (DDS): 0.0
More commit stats: commits.ecosyste.ms
See more repository details: repos.ecosyste.ms
Last synced: 8 days ago
sgbench 1.0.0
A collection of metrics for scene graph generation4 versions - Latest release: 10 months ago - 170 downloads last month - 414 stars on GitHub - 1 maintainer
mapmanagercore 0.1.27.post0
MapManagerCore is a Python library that provides the core functionality for MapManager.11 versions - Latest release: 10 months ago - 193 downloads last month - 0 stars on GitHub - 1 maintainer
educelab-imgproc 0.6.0
EduceLab image processing module10 versions - Latest release: 10 months ago - 508 downloads last month - 0 stars on gitlab.com - 1 maintainer
easyidp 2.0.0
A handy tool for dealing with region of interest (ROI) on the image reconstruction (Metashape & P...5 versions - Latest release: 11 months ago - 204 downloads last month - 47 stars on GitHub - 1 maintainer
oresat-star-tracker 0.3.1
OreSat Star Tracker OLAF app4 versions - Latest release: 11 months ago - 128 downloads last month - 3 stars on GitHub - 1 maintainer
apeer-ometiff-library 1.11.0
Library to read and write ometiff images17 versions - Latest release: 11 months ago - 6 dependent repositories - 2.09 thousand downloads last month - 26 stars on GitHub - 1 maintainer
multiplex-imaging-pipeline 0.2.1
A Python library for multiplex imaging analysis11 versions - Latest release: 12 months ago - 313 downloads last month - 1 maintainer
scifo 0.0.9
Scifo (Scientific Zarr) is a Python library for working with the Scifo image format1 version - Latest release: about 1 year ago - 31 downloads last month - 1 maintainer
scarr 0.0.9
Scarr (Multi-Resolution Zarr) is a Python library for working with the Scarr image format1 version - Latest release: about 1 year ago - 25 downloads last month - 1 maintainer
napari-dab-cellcount 0.1.4
A napari plugin for counting cells.4 versions - Latest release: about 1 year ago - 133 downloads last month - 0 stars on GitHub - 1 maintainer
mzarr 0.0.8
Mzarr (Multi-Resolution Zarr) is a Python library for working with the Mzarr image format8 versions - Latest release: about 1 year ago - 198 downloads last month - 2 maintainers
pharaglow 0.9.6
A toolset to analyze videos of foraging animals.4 versions - Latest release: about 1 year ago - 151 downloads last month - 0 stars on GitHub - 2 maintainers
simplipytem 1.0.11
A python package to simplify the processing and analysis of TEM and in situ TEM images and videos12 versions - Latest release: about 1 year ago - 329 downloads last month - 1 maintainer
sukta 0.0.7
Personalized training loop utilities for ML, RL, Robotics6 versions - Latest release: about 1 year ago - 284 downloads last month - 1 maintainer
wsinfer-mil 0.1.0
Run specimen-level inference on whole slide images.1 version - Latest release: about 1 year ago - 51 downloads last month - 0 stars on GitHub - 1 maintainer
chimerax 0.1.71
Analysis and visualization of molecular structures and 3D microscopy9 versions - Latest release: about 1 year ago - 310 downloads last month - 9 stars on GitHub - 1 maintainer
cellmaps-sdk 0.1.0
The SDK for tool builders who wish to integrate their tool into the CellMaps Analysis Workflow IME13 versions - Latest release: about 1 year ago - 106 downloads last month - 1 maintainer
marie-ai 3.0.29
Python library to Integrate AI-powered features into your applications7 versions - Latest release: about 1 year ago - 124 downloads last month - 60 stars on GitHub - 1 maintainer
pixelpartitioner 1.0.2
Tools for pixel partitioning, intensity-based segmentation, and visualization.3 versions - Latest release: about 1 year ago - 138 downloads last month - 1 stars on GitHub - 1 maintainer
strong-image-creation 0.9.1
A package to create summed images from a series of tiff or h5 files in a folder.10 versions - Latest release: about 1 year ago - 328 downloads last month - 7 stars on GitHub - 1 maintainer
cell-bin 1.3.4 💰
A framework for generating single-cell gene expression data11 versions - Latest release: about 1 year ago - 1 dependent package - 518 downloads last month - 8,959 stars on GitHub - 1 maintainer
napari-bil-data-viewer 0.6.0
Napari plugin for viewing Brain Image Library datasets13 versions - Latest release: about 1 year ago - 2 dependent repositories - 377 downloads last month - 6 stars on GitHub - 1 maintainer
wsinfer 0.6.1
Run patch-based classification on pathology whole slide images.12 versions - Latest release: about 1 year ago - 391 downloads last month - 52 stars on GitHub - 1 maintainer
graphite-datasets 1.0.59
tensorflow/datasets is a library of datasets ready to use with TensorFlow.60 versions - Latest release: about 1 year ago - 1.78 thousand downloads last month - 4,392 stars on GitHub - 1 maintainer
napari-tifffile-reader 0.1.1
A napari reader plugin for tiff images.3 versions - Latest release: about 1 year ago - 1 dependent repositories - 152 downloads last month - 9 stars on GitHub - 1 maintainer
alignem 0.6.0
AlignEM is a GUI for aligning or 'registering' electron microscopy images using SWiFT-IR16 versions - Latest release: about 1 year ago - 604 downloads last month - 4 stars on GitHub - 1 maintainer
cryaleconcho 0.0.6 removed
Napari plugin of algorithms for Panoptic Segmentation of organelles in EM4 versions - Latest release: about 1 year ago - 13 stars on GitHub - 1 maintainer
herbs 0.2.8
A Python-based GUI for Histological E-data Registration in Brain Space32 versions - Latest release: about 1 year ago - 1.14 thousand downloads last month - 18 stars on GitHub - 1 maintainer
cryohub 0.6.4
IO hub for Cryo-EM, Cryo-ET and subtomogram averaging data.11 versions - Latest release: about 1 year ago - 2 dependent packages - 1 dependent repositories - 368 downloads last month - 9 stars on GitHub - 1 maintainer
skoots 0.0.5
SKeletOn ObjecT Segmentation (SKOOTS)4 versions - Latest release: over 1 year ago - 140 downloads last month - 3 stars on GitHub - 1 maintainer
unpaved-road-condition-analysis 0.0.1
A Python package for analyzing the condition of unpaved roads using machine learning and image pr...1 version - Latest release: over 1 year ago - 57 downloads last month - 3 stars on GitHub - 2 maintainers
st-visium-datasets 0.3.0
5 versions - Latest release: over 1 year ago - 283 downloads last month - 1 maintainermiso2 3.0.7
Python scripts for training CNNs for particle classification45 versions - Latest release: over 1 year ago - 1 dependent repositories - 1.5 thousand downloads last month - 4 stars on GitHub - 1 maintainer
napari-annotatorj 0.0.8
The napari adaptation of the ImageJ/Fiji plugin AnnotatorJ for easy image annotation.6 versions - Latest release: over 1 year ago - 1 dependent package - 1 dependent repositories - 199 downloads last month - 9 stars on GitHub - 1 maintainer
hmsm 0.9.1
Tools for image based digitization of historical music storage media2 versions - Latest release: over 1 year ago - 107 downloads last month - 0 stars on GitHub - 1 maintainer
wsidicom-data 0.3.0
Test data for wsidicom3 versions - Latest release: over 1 year ago - 246 downloads last month - 0 stars on GitHub - 1 maintainer
tracking-challenge-demo 0.0.8
A demo plugin to load, segment and save tracking challenge data.8 versions - Latest release: over 1 year ago - 1 dependent repositories - 267 downloads last month - 0 stars on GitHub - 1 maintainer
eyepy 0.12.2
A python package to read, analyse and visualize OCT and fundus data form various sources.4 versions - Latest release: over 1 year ago - 1 dependent repositories - 239 downloads last month - 52 stars on GitHub - 1 maintainer
n2v 0.3.3
Noise2Void allows the training of a denoising CNN from individual noisy images. This implementati...16 versions - Latest release: over 1 year ago - 4 dependent packages - 5 dependent repositories - 1.14 thousand downloads last month - 440 stars on GitHub - 3 maintainers
competitionassay 0.0.5
Software for the analysis of competition assay data.2 versions - Latest release: over 1 year ago - 75 downloads last month - 1 stars on GitHub - 1 maintainer
bioio-imagecodecs 0.0.1
A bioio plugin for reading files via imagecodecs1 version - Latest release: over 1 year ago - 81 stars on GitHub - 1 maintainer
aicsimageio 4.14.0
Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Pure Python70 versions - Latest release: over 1 year ago - 45 dependent packages - 30 dependent repositories - 18.2 thousand downloads last month - 211 stars on GitHub - 1 maintainer
maphis 1.0.9 💰
Hierarchical segmentation and extraction of various measurements from photos of (not only) arthro...22 versions - Latest release: over 1 year ago - 512 downloads last month - 37,108 stars on GitHub - 1 maintainer
cellpose-omni-acdc 0.6.10
cellpose fork developed for omnipose2 versions - Latest release: over 1 year ago - 1 dependent package - 108 downloads last month - 4 stars on GitHub - 1 maintainer
firetitipylib 1.5.7
Python libraries used as support/tools.18 versions - Latest release: over 1 year ago - 1 dependent repositories - 207 downloads last month - 1 maintainer
ufish 0.1.1
Deep learning based spot detection for FISH images.2 versions - Latest release: over 1 year ago - 1 dependent package - 133 downloads last month - 21 stars on GitHub - 1 maintainer
napari-mzarr 0.0.3
A reader and writer plugin for the Mzarr image format.3 versions - Latest release: over 1 year ago - 132 downloads last month - 2 maintainers
synthesisai 0.5.2
Python library for loading synthetic data for ML use cases17 versions - Latest release: over 1 year ago - 589 downloads last month - 1 stars on GitHub - 1 maintainer
stio 0.1.0
IO for Stereo Cell1 version - Latest release: over 1 year ago - 25 downloads last month - 1 maintainer
cellbin 1.2.5 removed
A framework for generating single-cell gene expression data1 version - Latest release: over 1 year ago
generate-dense-patches 0.0.2
A simple plugin to create a lot of training data from a 3D volume and mask2 versions - Latest release: over 1 year ago - 115 downloads last month - 1 maintainer
pathpretrain 0.1.2
Simple setup train image models.2 versions - Latest release: over 1 year ago - 1 dependent package - 1 dependent repositories - 48 downloads last month - 1 stars on GitHub - 1 maintainer
nucleaizer-backend 0.2.6
The backend for the nucleAIzer nuclei segmentation method.8 versions - Latest release: over 1 year ago - 1 dependent package - 1 dependent repositories - 197 downloads last month - 0 stars on GitHub - 2 maintainers
napari-boardgame-maker 0.0.2
Make boardgame tiles2 versions - Latest release: over 1 year ago - 104 downloads last month - 0 stars on GitHub - 1 maintainer
ipp-toolkit 0.1.2
A general framework for informative path planning experiments, with a focus on wrapping datasets,...3 versions - Latest release: over 1 year ago - 148 downloads last month - 1 maintainer
milwrm 1.1.1
Multiplex Image Labeling With Regional Morphology19 versions - Latest release: almost 2 years ago - 1 dependent repositories - 508 downloads last month - 1 stars on GitHub - 2 maintainers
deepflash2 0.2.3
A Deep learning pipeline for segmentation of fluorescent labels in microscopy images27 versions - Latest release: almost 2 years ago - 1 dependent package - 1 dependent repositories - 350 downloads last month - 57 stars on GitHub - 1 maintainer
wsic 0.9.0
Whole Slide Image (WSI) conversion for brightfield histology images13 versions - Latest release: almost 2 years ago - 1 dependent repositories - 371 downloads last month - 36 stars on GitHub - 1 maintainer
volume-segmantics-vsui 0.3.6
A toolkit for semantic segmentation of volumetric data using pyTorch deep learning models26 versions - Latest release: almost 2 years ago - 714 downloads last month - 9 stars on GitHub - 1 maintainer
omeslicc 0.5.2
Ome(ro) Slide Image Conversion and Compression pipeline5 versions - Latest release: almost 2 years ago - 258 downloads last month - 7 stars on GitHub - 1 maintainer
volume-segmantics 0.3.2
A toolkit for semantic segmentation of volumetric data using pyTorch deep learning models11 versions - Latest release: about 2 years ago - 1 dependent repositories - 389 downloads last month - 9 stars on GitHub - 1 maintainer
tiff-inspector 0.1.1
A package for examining the structure and contents of the metadata contained within tiff files2 versions - Latest release: about 2 years ago - 102 downloads last month - 1 stars on GitHub - 1 maintainer
eyepie 0.11.3
A python package to read, analyse and visualize OCT and fundus data form various sources.38 versions - Latest release: about 2 years ago - 1 dependent package - 1 dependent repositories - 856 downloads last month - 52 stars on GitHub - 1 maintainer
nlp-cryptography 0.1.0 removed
NLP Cryptography1 version - Latest release: about 2 years ago - 1 maintainer
cellpose-omni 0.9.1
cellpose fork developed for omnipose7 versions - Latest release: about 2 years ago - 1 dependent package - 401 downloads last month - 4 stars on GitHub - 1 maintainer
cloudreg 1.0.1
Automatic terabyte-scale cross-modal brain volume registration3 versions - Latest release: about 2 years ago - 146 downloads last month - 11 stars on GitHub - 1 maintainer
napping 0.2.4
Control point mapping and coordination transformation using napari14 versions - Latest release: about 2 years ago - 2 dependent repositories - 591 downloads last month - 2 stars on GitHub - 3 maintainers
napari-imsmicrolink 0.1.9
Plugin to perform IMS to microscopy registration using laser ablation marks.14 versions - Latest release: about 2 years ago - 1 dependent repositories - 337 downloads last month - 6 stars on GitHub - 1 maintainer
histo-patch 0.95
histopatch: image patch extraction from Whole Slide Images2 versions - Latest release: about 2 years ago - 102 downloads last month - 1 stars on GitHub - 1 maintainer
cellpose-vollseg 0.0.3
modification of cellpose algorithm3 versions - Latest release: about 2 years ago - 1 dependent package - 137 downloads last month - 1,310 stars on GitHub - 1 maintainer
clickpoints 1.10.0
Scientific toolbox for manual and automatic image evaluation.22 versions - Latest release: over 2 years ago - 5 dependent repositories - 419 downloads last month - 16 stars on GitHub - 1 maintainer
unicell 0.0.1
Universal cell segmentation2 versions - Latest release: over 2 years ago - 116 downloads last month - 3 stars on GitHub - 1 maintainer
napari-unicell 0.0.1
universal cell segmentation models5 versions - Latest release: over 2 years ago - 161 downloads last month - 0 stars on GitHub - 1 maintainer
aydin 0.1.15
Aydin - Denoising but chill11 versions - Latest release: over 2 years ago - 1 dependent repositories - 572 downloads last month - 155 stars on GitHub - 1 maintainer
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