Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

Top 1.6% on pypi.org
Top 1.5% downloads on pypi.org
Top 0.1% dependent packages on pypi.org
Top 1.6% dependent repos on pypi.org
Top 3.2% docker downloads on pypi.org

pypi.org : magicgui

build GUIs from python types

Registry - Source - Documentation - JSON
purl: pkg:pypi/magicgui
Keywords: gui, type annotations, widgets, autogeneration, graphical-user-interface, python, type-annotations
License: MIT
Latest release: 3 months ago
First release: over 4 years ago
Dependent packages: 185
Dependent repositories: 82
Downloads: 46,729 last month
Stars: 294 on GitHub
Forks: 46 on GitHub
Docker dependents: 5
Docker downloads: 384
Total Commits: 520
Committers: 22
Average commits per author: 23.636
Development Distribution Score (DDS): 0.223
More commit stats: commits.ecosyste.ms
See more repository details: repos.ecosyste.ms
Last synced: 8 days ago

napari-segment-everything 0.1.6
A Napari SAM plugin to segment everything in your image (not just some things)
7 versions - Latest release: 26 days ago - 226 downloads last month - 2 stars on GitHub - 1 maintainer
napari-pixseq 1.0.2
A Napari plugin for extracting time series traces from Single Molecule Localisation Microsocpy (S...
3 versions - Latest release: 27 days ago - 319 downloads last month - 0 stars on GitHub - 1 maintainer
cellfinder 1.2.0
Automated 3D cell detection in large microscopy images
100 versions - Latest release: 28 days ago - 3 dependent packages - 1.59 thousand downloads last month - 170 stars on GitHub - 2 maintainers
brainreg 1.0.9
Automated multi-atlas whole-brain microscopy registration
45 versions - Latest release: 28 days ago - 6 dependent packages - 1 dependent repositories - 1.6 thousand downloads last month - 108 stars on GitHub - 2 maintainers
napari-hippo 0.2.0
A fat and clumsy collection of hyperspectral tools
2 versions - Latest release: 28 days ago - 143 downloads last month - 3 stars on GitHub - 1 maintainer
biaplotter 0.0.3
A base napari plotter widget for interactive plotting
3 versions - Latest release: 29 days ago - 445 downloads last month - 3 stars on GitHub - 1 maintainer
tabulous 0.5.7
A table data viewer for Python
24 versions - Latest release: about 1 month ago - 1 dependent package - 219 downloads last month - 72 stars on GitHub - 1 maintainer
napari-smlmlab 0.1.1
Napari widget for BP04 Practical
11 versions - Latest release: about 1 month ago - 114 downloads last month - 1 maintainer
cylindra 1.0.0b1
Spectral analysis, simulation and subtomogram averaging of heterogenic cylindrical structures
2 versions - Latest release: about 1 month ago - 3.41 thousand downloads last month - 7 stars on GitHub - 1 maintainer
napari-threedee 0.0.19
A suite of useful tools based on 3D interactivity in napari
19 versions - Latest release: about 1 month ago - 1 dependent repositories - 1.53 thousand downloads last month - 30 stars on GitHub - 2 maintainers
napari-3dtimereg 0.0.5 💰
Registration of 3D movies applied to all channels
5 versions - Latest release: about 1 month ago - 161 downloads last month - 2,045 stars on GitHub - 1 maintainer
vollseg-napari-trackmate 2.5.9 💰
Track analysis using TrackMate xml and csv generated tracks using NapaTrackMater as the base library
73 versions - Latest release: about 1 month ago - 495 downloads last month - 0 stars on GitHub - 1 maintainer
napari-nyxus 0.1.3
A napari plugin for calculating features from intensity-label image data
3 versions - Latest release: about 1 month ago - 21 downloads last month - 4 stars on GitHub - 1 maintainer
napari-conidie 1.0.2
A segmentation tool to get conidie and hyphe
4 versions - Latest release: about 1 month ago - 238 downloads last month - 0 stars on GitHub - 1 maintainer
napari-3d-counter 0.2.1
A simple plugin for counting objects in 3D images
9 versions - Latest release: about 2 months ago - 97 downloads last month - 3 stars on GitHub - 1 maintainer
particleannotation 0.3.7
Particle annotation tool for Cryo-EM and Cryo-ET
8 versions - Latest release: about 2 months ago - 126 downloads last month - 1 maintainer
napam 0.0.1
A plugin that allows you to run macros on the images for any kind of image processing.
1 version - Latest release: about 2 months ago - 34 downloads last month - 1 stars on GitHub - 1 maintainer
napari-blossom 0.1.6
Segmentation of blossom apple tree images
11 versions - Latest release: about 2 months ago - 83 downloads last month - 3 stars on GitHub - 1 maintainer
napari-toothfairy-annotator 0.0.12
The plugin employed to annotate volumes employed in the ToothFairy 2 Challenge
15 versions - Latest release: about 2 months ago - 436 downloads last month - 0 stars on GitHub - 1 maintainer
napari-findaureus 0.0.4
Locate bacteria in CLSM obtained infected bone tissue images
4 versions - Latest release: about 2 months ago - 117 downloads last month - 1 stars on GitHub - 1 maintainer
surforama 0.0.9
a tool for using surfaces to explore volumetric data in napari
9 versions - Latest release: about 2 months ago - 1 dependent package - 155 downloads last month - 15 stars on GitHub - 2 maintainers
napari-tomodl 0.1.15
A plugin for optical projection tomography reconstruction with model-based neural networks.
26 versions - Latest release: about 2 months ago - 155 downloads last month - 1 maintainer
pyidi 0.30.1
Python Image Displacement Identification.
19 versions - Latest release: about 2 months ago - 1 dependent package - 1 dependent repositories - 225 downloads last month - 26 stars on GitHub - 3 maintainers
blik 0.6.13
Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.
28 versions - Latest release: about 2 months ago - 1 dependent repositories - 437 downloads last month - 20 stars on GitHub - 1 maintainer
napari-tomotwin 0.4.0
Several tools for the work with TomoTwin
20 versions - Latest release: about 2 months ago - 320 downloads last month - 4 stars on GitHub - 1 maintainer
cut-detector 0.0.12
Automatic Cut Detector
10 versions - Latest release: 2 months ago - 111 downloads last month - 0 stars on GitHub - 1 maintainer
in-silico-fate-mapping 0.1.2
TODO
3 versions - Latest release: 2 months ago - 101 downloads last month - 5 stars on GitHub - 3 maintainers
napari-ehooke 0.0.6
eHooke implementation within napari
6 versions - Latest release: 2 months ago - 24 downloads last month - 2 stars on GitHub - 1 maintainer
napari-spatialdata 0.4.1
Interactive visualization of spatial omics data with napari
14 versions - Latest release: 2 months ago - 1 dependent package - 756 downloads last month - 33 stars on GitHub - 1 maintainer
napari-ndev 0.6.5
A collection of widgets to process images from start to finish--focused on neural development.
22 versions - Latest release: 2 months ago - 1 dependent repositories - 58 downloads last month - 2 stars on GitHub - 1 maintainer
napari-chatgpt 2024.3.26
A napari plugin to process and analyse images with chatGPT.
31 versions - Latest release: 3 months ago - 320 downloads last month - 196 stars on GitHub - 1 maintainer
napari-nanopyx 0.1.4
napari plugin of Nanoscopy Python library (NanoPyx, the successor to NanoJ) - focused on light mi...
13 versions - Latest release: 3 months ago - 72 downloads last month - 6 stars on GitHub - 3 maintainers
Top 2.2% on pypi.org
npe2 0.7.5
napari plugin engine v2
25 versions - Latest release: 3 months ago - 18 dependent packages - 27 dependent repositories - 46.1 thousand downloads last month - 9 stars on GitHub - 5 maintainers
plateletanalysis 0.0.4
plateletanalysis
4 versions - Latest release: 3 months ago - 1 dependent package - 34 downloads last month - 2 stars on GitHub - 2 maintainers
mousetumornet 0.0.5
nnU-Net model for the segmentation of lung tumor nodules in mice CT scans.
4 versions - Latest release: 3 months ago - 34 downloads last month - 5,098 stars on GitHub - 1 maintainer
Top 7.7% on pypi.org
magic-class 0.7.10
Generate multifunctional GUIs from classes
54 versions - Latest release: 3 months ago - 7 dependent packages - 2 dependent repositories - 710 downloads last month - 35 stars on GitHub - 1 maintainer
napari-nd-annotator 0.2.3
A toolbox for annotating objects one by one in nD
12 versions - Latest release: 3 months ago - 1 dependent repositories - 577 downloads last month - 25 stars on GitHub - 1 maintainer
cellcanvas 0.0.1
A tool for painting in cellular architecture
1 version - Latest release: 3 months ago - 57 downloads last month - 7 stars on GitHub - 2 maintainers
napari-micromanager 0.1.0
Micro-Manager GUI interface in napari.
7 versions - Latest release: 3 months ago - 1 dependent repositories - 69 downloads last month - 57 stars on GitHub - 1 maintainer
Top 6.1% on pypi.org
btrack 0.6.5
A framework for Bayesian multi-object tracking
33 versions - Latest release: 3 months ago - 8 dependent packages - 6 dependent repositories - 1.73 thousand downloads last month - 280 stars on GitHub - 1 maintainer
napari-convpaint 0.4.0
A plugin for segmentation by pixel classification using convolutional feature extraction
5 versions - Latest release: 3 months ago - 2 dependent packages - 358 downloads last month - 9 stars on GitHub - 1 maintainer
napari-rembg 0.0.7
AI-based foreground extraction in scientific and natural images.
7 versions - Latest release: 4 months ago - 75 downloads last month - 1 stars on GitHub - 1 maintainer
arcos-gui 0.1.3
A napari plugin to detect and visualize collective signaling events
11 versions - Latest release: 4 months ago - 1 dependent repositories - 79 downloads last month - 5 stars on GitHub - 1 maintainer
yt-napari 0.4.0
A napari plugin for loading data from yt
7 versions - Latest release: 4 months ago - 1 dependent repositories - 63 downloads last month - 4 stars on GitHub - 1 maintainer
napari-spofi 0.0.1
napari plugin to interactively train and test a StarDist model
2 versions - Latest release: 4 months ago - 32 downloads last month - 0 stars on GitHub - 1 maintainer
napari-clemreg 0.2.0
A plugin for registering multimodal image volumes based on common segmented structures of interes...
10 versions - Latest release: 4 months ago - 1 dependent repositories - 40 downloads last month - 12 stars on GitHub - 2 maintainers
napari-bbox 0.0.7
A new layer for bounding boxes in 2+ dimensions
7 versions - Latest release: 4 months ago - 2 dependent packages - 123 downloads last month - 4 stars on GitHub - 1 maintainer
napari-potential-field-navigation 0.1.1
A simple plugin for trajectories visualisations in napari for lung navigation in CTs scans
1 version - Latest release: 4 months ago - 31 downloads last month - 1 maintainer
cryocanvas 0.0.1
A plugin for interactive segmentation of CryoET data using ML embeddings
1 version - Latest release: 4 months ago - 24 downloads last month - 6 stars on GitHub - 1 maintainer
ultrack 0.3.1
4 versions - Latest release: 4 months ago - 42 downloads last month - 1 maintainer
Top 1.7% on pypi.org
napari 0.4.19 💰
n-dimensional array viewer in Python
166 versions - Latest release: 4 months ago - 310 dependent packages - 170 dependent repositories - 42 thousand downloads last month - 2,045 stars on GitHub - 5 maintainers
napari-points2regions 0.0.2
A napari plugin for Points2Regions
2 versions - Latest release: 5 months ago - 21 downloads last month - 0 stars on GitHub - 1 maintainer
multireg 0.0.15 💰
Registration of 3D multiplex images with one common chanel
12 versions - Latest release: 5 months ago - 137 downloads last month - 2,045 stars on GitHub - 1 maintainer
napari-label-interpolator 0.1.1
A napari plugin to interpolate any number of nd-labels across a single dimension.
2 versions - Latest release: 5 months ago - 1 dependent package - 225 downloads last month - 10 stars on GitHub - 1 maintainer
mouselungseg 0.0.3
3D U-Net model for the segmentation of the lungs in mice CT scans.
2 versions - Latest release: 5 months ago - 13 downloads last month - 1 maintainer
napari-orientationpy 0.0.7
Napari plugin for the Orientationpy project.
7 versions - Latest release: 5 months ago - 72 downloads last month - 0 stars on GitHub - 1 maintainer
stemia 0.7.5
A personal collection of (sometimes...) useful scripts and tools for cryoem/cryoet.
28 versions - Latest release: 5 months ago - 1 dependent repositories - 190 downloads last month - 10 stars on GitHub - 1 maintainer
napari-bee-annotator 0.0.1
Napari plugin for the annotation of bee entering and leaving the hive.
1 version - Latest release: 5 months ago - 24 downloads last month - 1 stars on GitHub - 1 maintainer
brainreg-napari 0.1.4
Multi-atlas whole-brain microscopy registration
12 versions - Latest release: 5 months ago - 2 dependent packages - 96 downloads last month - 14 stars on GitHub - 1 maintainer
cellfinder-napari 1.0.2
Efficient cell detection in large images
39 versions - Latest release: 5 months ago - 3 dependent packages - 1 dependent repositories - 293 downloads last month - 24 stars on GitHub - 1 maintainer
napari-psf-extractor 1.0.2
A simple plugin to extract precise models of the Point Spread Functions of images
3 versions - Latest release: 6 months ago - 12 downloads last month - 1 stars on GitHub - 1 maintainer
napari-curviewer 0.1.0
A plugin to unroll organs along their curved central line
1 version - Latest release: 6 months ago - 14 downloads last month - 0 stars on GitHub - 1 maintainer
napari-yolo5-mitosis-detector 0.0.1
A simple plugin to use yolo5 for mitosis detection with napari
1 version - Latest release: 6 months ago - 16 downloads last month - 0 stars on GitHub - 1 maintainer
napari-magic-wand 0.0.3
Livewire-based annotation of objects.
3 versions - Latest release: 6 months ago - 28 downloads last month - 1 stars on GitHub - 1 maintainer
napari-roi-registration 0.1.4
A plugin to perform registration of regions-of-interests in time-lapse data.
13 versions - Latest release: 6 months ago - 1 dependent repositories - 110 downloads last month - 5 stars on GitHub - 1 maintainer
napari-sketchpose 0.1.8
A segmentation plugin to adapt Omnipose implementation to partial labelling.
14 versions - Latest release: 6 months ago - 64 downloads last month - 1 maintainer
napari-locan 0.5.0
Use locan methods in napari for single-molecule localization microscopy data.
5 versions - Latest release: 6 months ago - 23 downloads last month - 1 stars on GitHub - 1 maintainer
napari-sam4is 0.0.6
Create annotations for instance segmentation using Segment Anything models
6 versions - Latest release: 6 months ago - 55 downloads last month - 23 stars on GitHub - 1 maintainer
napari-3d-ortho-viewer 0.1.5
Napari 3D Ortho Viewer - an ortho viewer for napari for 3D images
3 versions - Latest release: 7 months ago - 1 dependent package - 1 dependent repositories - 90 downloads last month - 8 stars on GitHub - 1 maintainer
napari-live-histogram 0.0.2
Dynamically change the layer opacity in Napari.
2 versions - Latest release: 7 months ago - 30 downloads last month - 0 stars on GitHub - 1 maintainer
manini 0.0.10 removed
An user-friendly plugin that enables to annotate images from a pre-trained model (segmentation, c...
10 versions - Latest release: 7 months ago - 307 downloads last month - 0 stars on GitHub - 1 maintainer
napari-label-focus 0.0.7
Easily focus the view on selected elements form a Labels layer.
7 versions - Latest release: 7 months ago - 1 dependent package - 47 downloads last month - 0 stars on GitHub - 1 maintainer
napari-floodfill 0.0.1
Livewire-based annotation of objects.
1 version - Latest release: 7 months ago - 15 downloads last month - 0 stars on GitHub - 1 maintainer
napari-z-plotter 0.0.6
Interactively plot the image intensity profile along the depth axis of a 3D image dataset.
6 versions - Latest release: 7 months ago - 27 downloads last month - 1 stars on GitHub - 1 maintainer
napari-aisegcell 0.1.0
napari plugin for deep learning-based segmentation of bright field images
1 version - Latest release: 7 months ago - 9 downloads last month - 0 stars on GitHub - 1 maintainer
napari-trackpy 0.3.0
Plugin to do trackpy particle tracking on microscopy data within napari
3 versions - Latest release: 7 months ago - 34 downloads last month - 0 stars on GitHub - 1 maintainer
napari-apr-viewer 1.0.1
A simple plugin to view APR images in napari
6 versions - Latest release: 7 months ago - 1 dependent repositories - 36 downloads last month - 5 stars on GitHub - 1 maintainer
competitionassay 0.0.5
Software for the analysis of competition assay data.
2 versions - Latest release: 7 months ago - 13 downloads last month - 1 maintainer
zarpaint 0.3.1
Paint segmentations directly to on-disk/remote zarr arrays
4 versions - Latest release: 7 months ago - 1 dependent repositories - 138 downloads last month - 13 stars on GitHub - 1 maintainer
napari-correct-drift 0.4.0
Drift correction 2D/3D for Napari similar to Fijis Correct 3D drift macro
4 versions - Latest release: 7 months ago - 21 downloads last month - 3 stars on GitHub - 1 maintainer
Top 8.5% on pypi.org
napari-assistant 0.4.7
A pocket calculator like interface to image processing in napari
38 versions - Latest release: 7 months ago - 6 dependent packages - 5 dependent repositories - 869 downloads last month - 20 stars on GitHub - 1 maintainer
set-calibration 0.0.1
"A tool allowing to modify the calibration (physical units) of images"
1 version - Latest release: 7 months ago - 16 downloads last month - 0 stars on GitHub - 1 maintainer
dummy-test-plugin 0.1.3
A simple plugin for testing purposes
3 versions - Latest release: 7 months ago - 26 downloads last month - 1 maintainer
napari-melt-pool-tracker 0.1.1
Plugin for tracking the width and depth of the melt pool and keyhole in x-ray images of laser pow...
3 versions - Latest release: 7 months ago - 17 downloads last month - 1 stars on GitHub - 1 maintainer
napari-sim-processor 0.1.1
A plugin to process Structured Illumination Microscopy data with gpu acceleration
12 versions - Latest release: 7 months ago - 1 dependent package - 1 dependent repositories - 76 downloads last month - 6 stars on GitHub - 1 maintainer
napari-psf-simulator 0.3.1
A plugin for simulations of the Point Spread Function, with aberrations
12 versions - Latest release: 7 months ago - 1 dependent repositories - 109 downloads last month - 25 stars on GitHub - 1 maintainer
napari-omaas 0.1.3
napari-OMAAS stands for Optical Mapping Acquisition and Analysis Software
4 versions - Latest release: 7 months ago - 20 downloads last month - 1 stars on GitHub - 1 maintainer
napari-simpleannotate 0.0.3
A simple plugin to label image
3 versions - Latest release: 8 months ago - 22 downloads last month - 0 stars on GitHub - 1 maintainer
vollseg-napari-mtrack 1.4.7 💰
Segment kymographs of microtubules, actin filaments and perform Ransac based fits to compute dyna...
23 versions - Latest release: 8 months ago - 60 downloads last month - 2 stars on GitHub - 1 maintainer
napari-cursor-tracker 0.1.3
Plugin for easy manual annotation/tracking of 3D or 2D + t dataset by following the cursor.
2 versions - Latest release: 8 months ago - 1 dependent package - 63 downloads last month - 2 stars on GitHub - 1 maintainer
napari-remove-objects 0.0.2
Right-click on objects to remove them in Napari.
2 versions - Latest release: 8 months ago - 11 downloads last month - 0 stars on GitHub - 1 maintainer
napari-woggle-opacity 0.0.1
Dynamically change the layer opacity in Napari.
1 version - Latest release: 8 months ago - 3 downloads last month - 0 stars on GitHub - 1 maintainer
napari-signal-selector 0.0.3
An interactive signal selector for napari, based on napari-matplotlib.
2 versions - Latest release: 8 months ago - 23 downloads last month - 1 stars on GitHub - 1 maintainer
napari-wsi 0.1.4
A plugin to read whole slide images within napari.
5 versions - Latest release: 8 months ago - 77 downloads last month - 12 stars on GitHub - 1 maintainer
napari-ufish 0.0.1
Deep learning-based FISH spot calling method.
1 version - Latest release: 9 months ago - 18 downloads last month - 0 stars on GitHub - 1 maintainer
napari-conference 0.1.0
A simple plugin that allows you to use napari + your webcam in video calls
1 version - Latest release: 9 months ago - 14 downloads last month - 1 stars on GitHub - 1 maintainer
napari-generic-simulator 0.1.2
A napari plugin to simulate raw-image stacks of Structured illumination microscopy (SIM).
31 versions - Latest release: 9 months ago - 95 downloads last month - 2 stars on GitHub - 1 maintainer
napari-parallel 0.0.2
Plugin to process images in parallel using several computers
2 versions - Latest release: 9 months ago - 13 downloads last month - 1 maintainer
napari-czann-segment 0.0.18
Semantic Segmentation using Deep Learning ONNX models packaged as *.czann files
9 versions - Latest release: 9 months ago - 115 downloads last month - 7 stars on GitHub - 1 maintainer
napari-workshop-plugin 1.0.4
A plugin to demonstrate some concepts from the 2023 workshop on software development related to n...
6 versions - Latest release: 9 months ago - 31 downloads last month - 0 stars on GitHub - 1 maintainer