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Top 1.0% on pypi.org
Top 1.6% downloads on pypi.org
Top 0.5% dependent packages on pypi.org
Top 0.9% dependent repos on pypi.org
Top 1.2% docker downloads on pypi.org

pypi.org : openslide-python

Python interface to OpenSlide

Registry - Source - Homepage - Documentation - JSON
purl: pkg:pypi/openslide-python
Keywords: OpenSlide , whole-slide image , virtual slide , library
License: LGPL-2.1+,SSPL-1.0
Latest release: 6 months ago
First release: about 11 years ago
Dependent packages: 33
Dependent repositories: 274
Downloads: 90,773 last month
Stars: 373 on GitHub
Forks: 183 on GitHub
Docker dependents: 45
Docker downloads: 25,590
Total Commits: 285
Committers: 5
Average commits per author: 57.0
Development Distribution Score (DDS): 0.053
More commit stats: commits.ecosyste.ms
See more repository details: repos.ecosyste.ms
Last synced: 2 days ago

qt-wsi-registration 0.0.14
Robust quad-tree based registration on whole slide images
13 versions - Latest release: 22 days ago - 1 dependent repositories - 340 downloads last month - 19 stars on GitHub - 2 maintainers
wsidicomizer 0.20.0
Tool for reading WSI files from proprietary formats and optionally convert them to to DICOM
36 versions - Latest release: 24 days ago - 1 dependent package - 1 dependent repositories - 2.11 thousand downloads last month - 70 stars on GitHub - 1 maintainer
pathopatch 1.0.6
PathoPatch - Accelerating Artificial Intelligence Based Whole Slide Image Analysis with an Optimi...
22 versions - Latest release: 30 days ago - 1.32 thousand downloads last month - 1 maintainer
jpl.pipedreams 1.1.0
Pipe Dreams: API for publication of scientific data
7 versions - Latest release: about 2 months ago - 1 dependent repositories - 389 downloads last month - 0 stars on GitHub - 2 maintainers
panimg 0.15.2
Conversion of medical images to MHA and TIFF.
34 versions - Latest release: 3 months ago - 2 dependent repositories - 1.31 thousand downloads last month - 14 stars on GitHub - 1 maintainer
Top 4.5% on pypi.org
large-image-source-openslide 1.30.6
An Openslide tilesource for large_image.
1,369 versions - Latest release: 3 months ago - 3 dependent packages - 5 dependent repositories - 37.7 thousand downloads last month - 198 stars on GitHub - 1 maintainer
Top 7.7% on pypi.org
tiatoolbox 1.6.0
Computational pathology toolbox developed by TIA Centre.
26 versions - Latest release: 4 months ago - 1 dependent package - 1 dependent repositories - 2.99 thousand downloads last month - 361 stars on GitHub - 2 maintainers
Top 5.0% on pypi.org
monailabel 0.8.5
Active Learning Toolkit for Healthcare Imaging
58 versions - Latest release: 5 months ago - 4 dependent repositories - 3.61 thousand downloads last month - 554 stars on GitHub - 3 maintainers
histoclean 0.0.14
Histoclean (initial package setup)
14 versions - Latest release: 5 months ago - 397 downloads last month - 1 maintainer
pathml 3.0.0
Tools for computational pathology
17 versions - Latest release: 6 months ago - 1 dependent repositories - 838 downloads last month - 419 stars on GitHub - 3 maintainers
histomics-stream 2.5.3
Whole-slide image streamer for machine learning frameworks.
23 versions - Latest release: 7 months ago - 1 dependent repositories - 835 downloads last month - 21 stars on GitHub - 1 maintainer
prismtoolbox 0.1.2
Toolbox for histopathology image analysis
5 versions - Latest release: 8 months ago - 131 downloads last month - 4 stars on GitHub - 1 maintainer
dlup 0.7.0
A package for digital pathology image analysis
43 versions - Latest release: 8 months ago - 1 dependent package - 1 dependent repositories - 1.24 thousand downloads last month - 25 stars on GitHub - 1 maintainer
scematk 0.0.3
Single Cell Extraction and Morphological Analysis of Whole Slide Images
84 versions - Latest release: 10 months ago - 1 dependent package - 2.08 thousand downloads last month - 3 stars on GitHub - 1 maintainer
wsi-tissue-tiler 0.1.0
It makes small patches / tiles of large whole slide images available in svs format.
1 version - Latest release: 11 months ago - 50 downloads last month - 1 stars on GitHub - 1 maintainer
patho-pix 0.1.1 removed
Preprocessing framework for pathological images
2 versions - Latest release: 11 months ago - 25 downloads last month - 2 stars on GitHub - 1 maintainer
ndpi-demerger 0.1.2
A package for extracting patches from NDPI images
3 versions - Latest release: 11 months ago - 111 downloads last month - 1 maintainer
wsidemerger 0.1.8
A package for extracting image patches from SVS files and performing color normalization
9 versions - Latest release: 11 months ago - 217 downloads last month - 1 maintainer
wsi-preprocessing 0.1.0 removed
A package for extracting image patches from SVS files and performing color normalization
1 version - Latest release: 11 months ago
immunoviewer 0.2.5
Explore and annotate your multi-channel large TIF files with this user-friendly viewer.
13 versions - Latest release: 12 months ago - 370 downloads last month - 0 stars on GitHub - 1 maintainer
comet_pipeline 0.1.0 removed
Pre-processing pipeline to index Whole Slide Images (WSIs)
1 version - Latest release: about 1 year ago - 1 maintainer
tissuumaps 3.2.1
TissUUmaps is a lightweight viewer that uses basic web tools to visualize gene expression data or...
128 versions - Latest release: about 1 year ago - 1 dependent repositories - 1.34 thousand downloads last month - 1 stars on GitHub - 1 maintainer
Top 7.3% on pypi.org
histolab 0.7.0 💰
Python library for Digital Pathology Image Processing
20 versions - Latest release: about 1 year ago - 1 dependent package - 2 dependent repositories - 1.4 thousand downloads last month - 355 stars on GitHub - 3 maintainers
liverquant 0.0.4
Quantitate liver histopathology in whole slide images
4 versions - Latest release: over 1 year ago - 163 downloads last month - 2 stars on GitHub - 1 maintainer
dicom-wsi 1.0.4
Package for converting whole slide image files to dicom.
2 versions - Latest release: over 1 year ago - 1 dependent repositories - 108 downloads last month - 19 stars on GitHub - 1 maintainer
Top 6.9% on pypi.org
monailabel-weekly 0.5.dev2340
Active Learning Toolkit for Healthcare Imaging
114 versions - Latest release: over 1 year ago - 2 dependent repositories - 2.28 thousand downloads last month - 687 stars on GitHub - 2 maintainers
pathaia 0.2.4
procedures for wsi analysis
7 versions - Latest release: over 1 year ago - 3 dependent repositories - 229 downloads last month - 3 stars on GitHub - 2 maintainers
wsiprocess 1.1.1
Whole Slide Image (WSI) Processing Library
14 versions - Latest release: over 1 year ago - 1 dependent repositories - 418 downloads last month - 16 stars on GitHub - 1 maintainer
histoprep 2.0.5
Read and process histological slide images with python!
55 versions - Latest release: almost 2 years ago - 1 dependent package - 1 dependent repositories - 1.68 thousand downloads last month - 15 stars on GitHub - 1 maintainer
wsiserver 1.0.4
Very simple wsi server
5 versions - Latest release: almost 2 years ago - 209 downloads last month - 2 stars on GitHub - 1 maintainer
pyslide 0.5.0
Python whole slide image analysis toolkit
9 versions - Latest release: about 2 years ago - 3 dependent repositories - 348 downloads last month - 48 stars on GitHub - 1 maintainer
wsipipe 0.1.6
A set of tools for processing pathology whole slide images for deep learning.
19 versions - Latest release: over 2 years ago - 338 downloads last month - 2 maintainers
Past Dependents
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All kinds runtime 32 openslide 6 extra == 'openslide' 4 extra == "openslide" 4 platform_machine == "x86_64" and extra == "test" 2 extra == "all" 2 all 2 full 1 extra == 'full' 1 extra == "full" 1 extra == 'dependencies' 1 extra == 'all' 1