pypi.org : pypath-omnipath : 0.16.15
Molecular signaling prior knowledge processing
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Dependencies
- python-igraph * extra == "graph" (optional)
- epam.indigo * extra == "metabo" (optional)
- openbabel * extra == "metabo" (optional)
- rdkit * extra == "metabo" (optional)
- sparqlwrapper * extra == "pathophenodb" (optional)
- PyYAML *
- beautifulsoup4 *
- certifi >=2023.7.22
- cryptography >=41.0.4
- dill *
- future *
- glom *
- lxml *
- matplotlib *
- numpy *
- openpyxl *
- pandas *
- psutil *
- pycurl *
- pypath-common >=0.2.0
- pyreadr *
- pysftp <0.3.0,>=0.2.9
- rdata *
- requests *
- scipy >=1.9.0
- sqlparse *
- tabulate *
- timeloop *
- toml *
- tornado >=3.6.6
- tqdm *
- typing_extensions *
- xlrd *