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stringmlst

Fast k-mer based tool for alignment and assembly-free multi locus sequence typing (MLST) directly from genome sequencing reads.

Ecosystem
pypi.org
Latest Release
0.6.3
over 5 years ago
Versions
15
Downloads
101 last month
Dependent Repos
1
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    Readme
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    Links
    Registry pypi.org
    Source Repository
    Docs Documentation
    JSON API View JSON
    CodeMeta codemeta.json
    Package Details
    PURL pkg:pypi/stringmlst
    spec
    License Other
    First Release about 9 years ago
    Last Synced 22 days ago
    Keywords
    MLST applied-bioinformatics-lab bacterial-database bacterial-genomes bioinformatics fastq-files kmer mlst python
    Repository
    Stars 45 on GitHub
    Forks 8 on GitHub
    repos.ecosyste.ms