Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
Top 3.8% dependent repos on repo1.maven.org
Top 0.7% docker downloads on repo1.maven.org
repo1.maven.org : org.seqdoop:hadoop-bam
A Java library for the manipulation of files in common bioinformatics formats using the Hadoop MapReduce framework.
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purl: pkg:maven/org.seqdoop/hadoop-bam
License: MIT
Latest release: about 6 years ago
First release: over 9 years ago
Namespace: org.seqdoop
Dependent packages: 44
Dependent repositories: 35
Stars: 69 on GitHub
Forks: 51 on GitHub
Docker dependents: 8
Docker downloads: 40,951,541
See more repository details: repos.ecosyste.ms
Last synced: 7 days ago
io.projectglow:glow-spark3_2.12 2.0.0
An open-source toolkit for large-scale genomic analysis8 versions - Latest release: 3 months ago - 8 dependent packages - 1 dependent repositories - 225 stars on GitHub
org.bdgenomics.adam:adam-core-spark3_2.12 1.0.1
A fast, scalable genome analysis system8 versions - Latest release: 5 months ago - 11 dependent packages - 8 dependent repositories - 948 stars on GitHub
org.bdgenomics.adam:adam-parent-spark3_2.12 1.0.1
A fast, scalable genome analysis system8 versions - Latest release: 5 months ago - 948 stars on GitHub
org.broadinstitute:gatk-test-utils 4.5.0.0
Development on GATK 429 versions - Latest release: 6 months ago - 1,396 stars on GitHub
org.broadinstitute:gatk 4.5.0.0
Development on GATK 448 versions - Latest release: 6 months ago - 2 dependent packages - 3 dependent repositories - 1,396 stars on GitHub
org.gorpipe:gor-spark 4.3.2
GORpipe allows analysis of large sets of genomic and phenotypic tabular data using a declarative ...36 versions - Latest release: over 1 year ago
io.projectglow:glow-spark2_2.11 1.1.2
An open-source toolkit for large-scale genomic analysis6 versions - Latest release: over 2 years ago - 1 dependent package - 225 stars on GitHub
io.projectglow:glow-spark2_2.12 1.1.2
An open-source toolkit for large-scale genomic analysis6 versions - Latest release: over 2 years ago - 225 stars on GitHub
org.biodatageeks:seqtender_2.12 0.4.0
seqtender1 version - Latest release: about 3 years ago - 0 stars on GitHub
org.biodatageeks:sequila_2.11 0.5.20
sequila10 versions - Latest release: over 3 years ago - 6 stars on GitHub
org.biodatageeks:seqtender_2.11 0.3.7
seqtender5 versions - Latest release: over 3 years ago - 0 stars on GitHub
org.bdgenomics.adam:adam-core-spark2_2.12 0.33.0
A fast, scalable genome analysis system7 versions - Latest release: over 3 years ago - 10 dependent packages - 1 dependent repositories - 948 stars on GitHub
org.bdgenomics.adam:adam-parent-spark2_2.12 0.33.0
A fast, scalable genome analysis system7 versions - Latest release: over 3 years ago - 948 stars on GitHub
org.bdgenomics.adam:adam-core-spark2_2.11 0.33.0
A fast, scalable genome analysis system14 versions - Latest release: over 3 years ago - 25 dependent packages - 11 dependent repositories - 948 stars on GitHub
org.bdgenomics.adam:adam-parent-spark2_2.11 0.33.0
A fast, scalable genome analysis system14 versions - Latest release: over 3 years ago - 948 stars on GitHub
io.projectglow:glow_2.12 0.5.0
An open-source toolkit for large-scale genomic analysis4 versions - Latest release: almost 4 years ago - 1 dependent repositories - 225 stars on GitHub
io.projectglow:glow_2.11 0.5.0
An open-source toolkit for large-scale genomic analysis8 versions - Latest release: almost 4 years ago - 1 dependent package - 225 stars on GitHub
com.lifeomic:spark-vcf 0.3.3
Spark datasource for vcf files6 versions - Latest release: over 4 years ago - 15 stars on GitHub
org.bdgenomics.mango:mango-parent 0.0.5
Sonatype helps open source projects to set up Maven repositories on https://oss.sonatype.org/5 versions - Latest release: over 4 years ago - 120 stars on GitHub
org.hammerlab.genomics:readsets_2.11 1.2.1
readsets9 versions - Latest release: almost 6 years ago - 0 stars on GitHub
org.hammerlab.adam:core_2.11 0.23.4
core8 versions - Latest release: almost 6 years ago - 2 dependent packages - 1 stars on GitHub
org.bdgenomics.adam:adam-core-spark2_2.10 0.23.0
A fast, scalable genome analysis system4 versions - Latest release: over 6 years ago - 10 dependent packages - 1 dependent repositories - 948 stars on GitHub
org.bdgenomics.adam:adam-parent-spark2_2.10 0.23.0
A fast, scalable genome analysis system4 versions - Latest release: over 6 years ago - 948 stars on GitHub
org.bdgenomics.adam:adam-core_2.11 0.23.0
A fast, scalable genome analysis system10 versions - Latest release: over 6 years ago - 14 dependent packages - 4 dependent repositories - 948 stars on GitHub
org.bdgenomics.adam:adam-parent_2.11 0.23.0
A fast, scalable genome analysis system10 versions - Latest release: over 6 years ago - 948 stars on GitHub
org.bdgenomics.adam:adam-core_2.10 0.23.0
A fast, scalable genome analysis system10 versions - Latest release: over 6 years ago - 15 dependent packages - 14 dependent repositories - 948 stars on GitHub
org.bdgenomics.adam:adam-parent_2.10 0.23.0
A fast, scalable genome analysis system10 versions - Latest release: over 6 years ago - 1 dependent repositories - 948 stars on GitHub
org.hammerlab.bam:load_2.11 1.1.0
load3 versions - Latest release: over 6 years ago - 3 dependent packages - 20 stars on GitHub
org.hammerlab.bam:check_2.11 1.1.0
check3 versions - Latest release: over 6 years ago - 3 dependent packages - 20 stars on GitHub
org.opencb.hpg-bigdata:hpg-bigdata-analysis 1.0.0-beta4
HPG BigData project aims to provide tools for processing genomic big data in a Hadoop cluster3 versions - Latest release: over 6 years ago - 2 dependent packages - 1 dependent repositories - 75 stars on GitHub
org.hammerlab:hadoop-bam_2.11 1.0.0
hadoop-bam1 version - Latest release: about 7 years ago - 0 stars on GitHub
org.hammerlab.adam:core_spark1_2.11 0.21.1
core_spark12 versions - Latest release: over 7 years ago
org.hammerlab.adam:core_spark1_2.10 0.21.1
core_spark12 versions - Latest release: over 7 years ago
org.hammerlab.adam:core_2.10 0.21.1
core3 versions - Latest release: over 7 years ago - 2 dependent packages
org.hammerlab.adam:adam-core_2.11 0.20.3
adam-core4 versions - Latest release: over 7 years ago - 2 dependent packages
org.hammerlab.adam:adam-core_2.10 0.20.3
adam-core4 versions - Latest release: over 7 years ago - 2 dependent packages - 1 dependent repositories
org.hammerlab.adam:adam-core_spark2_2.11 0.20.2
adam-core_spark21 version - Latest release: over 7 years ago
org.hammerlab.adam:adam-core_spark2_2.10 0.20.2
adam-core_spark21 version - Latest release: over 7 years ago
org.opencb.hpg-bigdata:hpg-bigdata-tools 0.6.0
HPG BigData project aims to provide tools for processing genomic big data in a Hadoop cluster5 versions - Latest release: almost 8 years ago - 2 dependent packages - 1 dependent repositories - 75 stars on GitHub
org.opencb.hpg:hpg-bigdata-tools 0.5.0
HPG Big data project aims to manage genomic big data in a Hadoop-based cluster1 version - Latest release: over 8 years ago - 4 dependent packages - 1 dependent repositories - 75 stars on GitHub
org.bdgenomics.adam:adam-core 0.16.0
A fast, scalable genome analysis system10 versions - Latest release: over 9 years ago - 5 dependent packages - 32 dependent repositories - 948 stars on GitHub
org.bdgenomics.adam:adam-parent 0.16.0
A fast, scalable genome analysis system10 versions - Latest release: over 9 years ago - 948 stars on GitHub
org.hammerlab.guacamole:guacamole 0.0.0
Sonatype helps open source projects to set up Maven repositories on https://oss.sonatype.org/1 version - Latest release: over 9 years ago - 1 dependent repositories - 83 stars on GitHub