Ecosyste.ms: Packages
An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.
rubygems.org "bioinformatics" keyword
fasta_motif_sliding_generator 0.0.1
Generates the sliding iterable for the given fasta stretch and check its starting motifs1 version - Latest release: 9 months ago - 310 downloads total - 0 stars on GitHub - 1 maintainer
bio-cgranges 0.0.3
Genomic interval overlap queries4 versions - Latest release: 8 months ago - 2.57 thousand downloads total - 0 stars on GitHub - 1 maintainer
biocgem 0.0.3
biocgem command line tools3 versions - Latest release: over 2 years ago - 3.77 thousand downloads total - 0 stars on GitHub - 1 maintainer
ruby-igv 0.0.9 💰
Control IGV (Integrative Genomics Viewer) with Ruby.9 versions - Latest release: 26 days ago - 8.41 thousand downloads total - 0 stars on GitHub - 1 maintainer
devops_system_util_profiler 0.0.2
devops system utility profiler for bioinformatics that does all the task required in the bioinfor...2 versions - Latest release: 9 months ago - 591 downloads total - 0 stars on GitHub - 1 maintainer
edlib 0.0.7 💰
Lightweight, super fast C/C++ library for sequence alignment using edit (Levenshtein) distance.7 versions - Latest release: over 1 year ago - 3.05 thousand downloads total - 0 stars on GitHub - 1 maintainer
bio-bigwig 0.0.1
This is a Ruby binding for libBigWig (https://github.com/dpryan79/libBigWig), which provides high...1 version - Latest release: over 2 years ago - 1.38 thousand downloads total - 0 stars on GitHub - 1 maintainer
mitab 0.0.1
A ruby parser for MITab file format.1 version - Latest release: about 8 years ago - 3.8 thousand downloads total - 0 stars on GitHub - 1 maintainer
bio-twobit 0.2.1 💰
This is a Ruby binding for lib2bit(https://github.com/dpryan79/lib2bit), which provides high-spee...6 versions - Latest release: over 1 year ago - 5.97 thousand downloads total - 1 stars on GitHub - 1 maintainer
libssw 0.0.3 💰
Ruby bindings for libssw5 versions - Latest release: about 3 years ago - 9.15 thousand downloads total - 3 stars on GitHub - 1 maintainer
dna 0.3.1
Simple FASTA/FASTQ/QSEQ parser library for Ruby.20 versions - Latest release: over 8 years ago - 4 dependent packages - 3 dependent repositories - 71.2 thousand downloads total - 4 stars on GitHub - 1 maintainer
aai 0.5.5
Calculate Seanie's amino acid similarity score between multiple genomes/bins.12 versions - Latest release: over 5 years ago - 32.5 thousand downloads total - 4 stars on GitHub - 1 maintainer
htslib 0.2.8 💰
HTSlib bindings for Ruby19 versions - Latest release: about 1 year ago - 1 dependent repositories - 16.8 thousand downloads total - 8 stars on GitHub - 2 maintainers
iroki_lib 0.0.1
Library code for Iroki, a phylogenetic tree customization program.1 version - Latest release: about 8 years ago - 3.13 thousand downloads total - 9 stars on GitHub - 1 maintainer
minimap2 0.2.21 💰
Ruby bindings to the Minimap2 aligner.22 versions - Latest release: almost 3 years ago - 18.8 thousand downloads total - 13 stars on GitHub - 1 maintainer
iroki 0.0.36
Command line app and library code for Iroki, a phylogenetic tree customization program.36 versions - Latest release: almost 7 years ago - 75.2 thousand downloads total - 28 stars on GitHub - 1 maintainer
oswitch 0.2.7
Use any docker image as the host operating system's user (same user name, same uid, same gid, and...6 versions - Latest release: almost 7 years ago - 13.5 thousand downloads total - 76 stars on GitHub - 1 maintainer
Top 7.1% on rubygems.org
69 versions - Latest release: 3 months ago - 10 dependent repositories - 155 thousand downloads total - 265 stars on GitHub - 2 maintainers
sequenceserver 3.0.1 💰
SequenceServer lets you rapidly set up a BLAST+ server with an intuitive user interface for use l...69 versions - Latest release: 3 months ago - 10 dependent repositories - 155 thousand downloads total - 265 stars on GitHub - 2 maintainers
arvados-google-api-client 0.8.7.6
Fork of google-api-client used by Ruby-based Arvados components.5 versions - Latest release: 3 months ago - 3 dependent packages - 3 dependent repositories - 133 thousand downloads total - 364 stars on GitHub - 1 maintainer
Related Keywords
ruby
11
genomics
5
docker
2
visualization
2
phylogenetic-trees
2
ecology
2
rubyplugin
2
rubygem
2
minimap2
1
microbial-ecology
1
data-science
1
virtualization
1
blast
1
genomics-visualization
1
hacktoberfest
1
javascript
1
sequence-alignment
1
sequencing
1
arvados
1
aws
1
azure
1
bigdata
1
cloud
1
cluster
1
cwl
1
gcp
1
go
1
python
1
workflow
1
workflow-engine
1
igv
1
cloud-computing
1
devops
1
devops-tools
1
system-programming
1
systemcheck
1
edlib
1
bigbed
1
bigwig
1
ruby-parser
1
genome
1
bioconductor
1
twobit
1
smith-waterman
1
dna
1
parser
1
amino-acid-similarity
1
bam
1
bcf
1
htslib
1
sam
1
slidingwindow
1
microbial-communities
1
rubyprogramming
1