Ecosyste.ms: Packages

An open API service providing package, version and dependency metadata of many open source software ecosystems and registries.

spack.io "sequencing" keyword

preseq 2.0.3
The preseq package is aimed at predicting and estimating the complexity of a genomic sequencing l...
2 versions - Latest release: 10 months ago - 60 stars on GitHub
Top 9.6% on spack.io
py-galaxy-job-metrics 22.1.1
The Galaxy job metrics framework and default plugins.
1 version - Latest release: over 1 year ago - 1 dependent package - 1,077 stars on GitHub - 1 maintainer
Top 9.6% on spack.io
py-galaxy-objectstore 22.1.1
The Galaxy object store framework and default implementations.
1 version - Latest release: over 1 year ago - 1 dependent package - 1,077 stars on GitHub - 1 maintainer
Top 9.6% on spack.io
py-galaxy-containers 22.1.1
The Galaxy containers module - interfaces for modeling and interacting with container backends (d...
1 version - Latest release: over 1 year ago - 1 dependent package - 1,077 stars on GitHub - 1 maintainer
Top 5.1% on spack.io
py-galaxy-util 22.1.2
Galaxy Generic Utilities
1 version - Latest release: over 1 year ago - 5 dependent packages - 1,077 stars on GitHub - 1 maintainer
Top 7.4% on spack.io
py-galaxy-tool-util 22.1.5
The Galaxy tool utilities.
1 version - Latest release: over 1 year ago - 2 dependent packages - 1,077 stars on GitHub - 1 maintainer
roary 3.13.0
Rapid large-scale prokaryote pan genome analysis
1 version - Latest release: over 1 year ago - 254 stars on GitHub
Top 9.9% on spack.io
fastp 0.23.4
A tool designed to provide fast all-in-one preprocessing for FastQ files.
3 versions - Latest release: 10 months ago - 1 dependent package - 1,450 stars on GitHub
py-pyfastaq 3.17.0
Manipulate FASTA and FASTQ files.
7 versions - Latest release: 3 months ago - 64 stars on GitHub - 1 maintainer
Related Keywords
bioinformatics 9 genomics 7 ngs 6 dna 5 hacktoberfest 5 pipeline 5 science 5 usegalaxy 5 workflow 5 workflow-engine 5 research 2 pathogen 2 next-generation-sequencing 2 infectious-diseases 2 global-health 2 umi 1 trimming 1 splitting 1 quality-control 1 quality 1 qc 1 preprocessing 1 polyg 1 overlap 1 merging 1 illumina 1 filtering 1 filter 1 fastq 1 duplication 1 adapter 1 capture-recapture 1 capture-recapture-models 1 library-complexity 1 sequencing-coverage 1 bioinformatics-pipeline 1